Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Iglv2-201ENSMUST00000103752 348 ntAPPRIS ALT2 BASIC3.84□□□□□ -1.79
Use1Q9CQ56 Xlr5a-202ENSMUST00000114520 867 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.79
Use1Q9CQ56 Gm15180-201ENSMUST00000117745 492 ntBASIC3.84□□□□□ -1.79
Use1Q9CQ56 Gm12852-201ENSMUST00000119478 719 ntBASIC3.84□□□□□ -1.79
Use1Q9CQ56 Gm13170-201ENSMUST00000119716 643 ntBASIC3.84□□□□□ -1.79
Use1Q9CQ56 Gm12237-201ENSMUST00000120158 470 ntBASIC3.84□□□□□ -1.79
Use1Q9CQ56 Olfr1081-ps1-201ENSMUST00000120210 945 ntBASIC3.84□□□□□ -1.79
Use1Q9CQ56 Cmc4-202ENSMUST00000120286 516 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
Use1Q9CQ56 Gm5379-201ENSMUST00000120973 826 ntBASIC3.84□□□□□ -1.79
Use1Q9CQ56 Gm11260-201ENSMUST00000121163 942 ntBASIC3.84□□□□□ -1.79
Use1Q9CQ56 Gm5123-201ENSMUST00000121905 837 ntBASIC3.84□□□□□ -1.79
Use1Q9CQ56 Gm14905-201ENSMUST00000122351 639 ntBASIC3.84□□□□□ -1.79
Use1Q9CQ56 4930451E10Rik-201ENSMUST00000130840 409 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Use1Q9CQ56 Gm15338-201ENSMUST00000151884 552 ntTSL 3 BASIC3.84□□□□□ -1.79
Use1Q9CQ56 Gm5755-201ENSMUST00000152394 837 ntBASIC3.84□□□□□ -1.79
Use1Q9CQ56 Gm25278-201ENSMUST00000157267 120 ntBASIC3.84□□□□□ -1.79
Use1Q9CQ56 Gm25908-201ENSMUST00000157624 98 ntBASIC3.84□□□□□ -1.79
Use1Q9CQ56 Gm16303-201ENSMUST00000161498 390 ntBASIC3.84□□□□□ -1.79
Use1Q9CQ56 Ubl5-209ENSMUST00000161882 489 ntTSL 3 BASIC3.84□□□□□ -1.79
Use1Q9CQ56 Vmn1r5-201ENSMUST00000164307 1056 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Use1Q9CQ56 Samd15-201ENSMUST00000169669 1194 ntBASIC3.84□□□□□ -1.79
Use1Q9CQ56 Gm3084-201ENSMUST00000169967 598 ntBASIC3.84□□□□□ -1.79
Use1Q9CQ56 S100a11-ps-201ENSMUST00000181735 306 ntBASIC3.84□□□□□ -1.79
Use1Q9CQ56 Mir6938-201ENSMUST00000184173 63 ntBASIC3.84□□□□□ -1.79
Use1Q9CQ56 Gm28550-201ENSMUST00000189125 618 ntTSL 5 BASIC3.84□□□□□ -1.79
Use1Q9CQ56 Gm28460-202ENSMUST00000190590 618 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Use1Q9CQ56 Gm9722-201ENSMUST00000194568 802 ntBASIC3.84□□□□□ -1.79
Use1Q9CQ56 Gm37167-201ENSMUST00000194946 396 ntBASIC3.84□□□□□ -1.79
Use1Q9CQ56 Csn2-204ENSMUST00000196869 879 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
Use1Q9CQ56 Csn2-208ENSMUST00000198057 827 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
Use1Q9CQ56 Gm44757-201ENSMUST00000206373 157 ntBASIC3.84□□□□□ -1.79
Use1Q9CQ56 Gm45031-201ENSMUST00000206800 288 ntBASIC3.84□□□□□ -1.79
Use1Q9CQ56 Gm5339-201ENSMUST00000210551 1102 ntBASIC3.84□□□□□ -1.79
Use1Q9CQ56 Arl2bp-203ENSMUST00000211858 318 ntTSL 5 BASIC3.84□□□□□ -1.79
Use1Q9CQ56 AC122317.1-201ENSMUST00000218404 708 ntTSL 5 BASIC3.84□□□□□ -1.79
Use1Q9CQ56 Gm36173-201ENSMUST00000219101 1163 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Use1Q9CQ56 Gm29774-201ENSMUST00000219270 436 ntBASIC3.84□□□□□ -1.79
Use1Q9CQ56 Gm35041-201ENSMUST00000219581 602 ntTSL 3 BASIC3.84□□□□□ -1.79
Use1Q9CQ56 AL672194.1-201ENSMUST00000224841 603 ntBASIC3.84□□□□□ -1.79
Use1Q9CQ56 Vmn1r28-203ENSMUST00000228678 909 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Use1Q9CQ56 Olfr827-201ENSMUST00000058123 1058 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Use1Q9CQ56 Olfr622-201ENSMUST00000058744 1105 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Use1Q9CQ56 Olfr492-201ENSMUST00000079865 945 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Use1Q9CQ56 Spink12-201ENSMUST00000081271 1007 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Use1Q9CQ56 Gm38091-201ENSMUST00000192418 3871 ntBASIC3.84□□□□□ -1.79
Use1Q9CQ56 Obox4-ps27-201ENSMUST00000179203 1362 ntBASIC3.84□□□□□ -1.79
Use1Q9CQ56 Obox4-ps12-201ENSMUST00000180084 1362 ntBASIC3.84□□□□□ -1.79
Use1Q9CQ56 Zfp708-201ENSMUST00000109742 2416 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.8
Use1Q9CQ56 Mmp8-201ENSMUST00000018765 2425 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
Use1Q9CQ56 AC122357.2-201ENSMUST00000220732 1525 ntBASIC3.84□□□□□ -1.8
Use1Q9CQ56 Olfr728-202ENSMUST00000213685 7087 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
Use1Q9CQ56 Muc15-202ENSMUST00000111016 3421 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Use1Q9CQ56 Vmn1r74-202ENSMUST00000228471 6608 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Use1Q9CQ56 Olfr186-202ENSMUST00000206463 2208 ntAPPRIS P1 TSL 3 BASIC3.83□□□□□ -1.8
Use1Q9CQ56 Foxp2-203ENSMUST00000115470 2692 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Use1Q9CQ56 Vmn1r34-205ENSMUST00000227332 3075 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Use1Q9CQ56 Vmn1r14-205ENSMUST00000227884 7542 ntAPPRIS P2 BASIC3.83□□□□□ -1.8
Use1Q9CQ56 Olfr741-203ENSMUST00000213903 3305 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Use1Q9CQ56 Gm24142-201ENSMUST00000101960 107 ntBASIC3.83□□□□□ -1.8
Use1Q9CQ56 Igkv1-35-201ENSMUST00000103374 359 ntAPPRIS ALT2 BASIC3.83□□□□□ -1.8
Use1Q9CQ56 Trav12d-2-201ENSMUST00000103593 341 ntAPPRIS ALT2 BASIC3.83□□□□□ -1.8
Use1Q9CQ56 Trav12n-2-201ENSMUST00000103619 341 ntAPPRIS ALT2 BASIC3.83□□□□□ -1.8
Use1Q9CQ56 Gm26376-201ENSMUST00000104784 110 ntBASIC3.83□□□□□ -1.8
Use1Q9CQ56 Gm12173-201ENSMUST00000117622 273 ntBASIC3.83□□□□□ -1.8
Use1Q9CQ56 Olfr383-ps1-201ENSMUST00000118895 935 ntBASIC3.83□□□□□ -1.8
Use1Q9CQ56 Gm11890-201ENSMUST00000119585 417 ntBASIC3.83□□□□□ -1.8
Use1Q9CQ56 Gm5384-201ENSMUST00000120313 463 ntBASIC3.83□□□□□ -1.8
Use1Q9CQ56 Rpl23a-ps4-201ENSMUST00000121008 455 ntBASIC3.83□□□□□ -1.8
Use1Q9CQ56 Gm15949-201ENSMUST00000129485 126 ntTSL 3 BASIC3.83□□□□□ -1.8
Use1Q9CQ56 Gm16068-201ENSMUST00000136557 504 ntTSL 3 BASIC3.83□□□□□ -1.8
Use1Q9CQ56 Gm16230-201ENSMUST00000155550 521 ntTSL 3 BASIC3.83□□□□□ -1.8
Use1Q9CQ56 Gm23906-201ENSMUST00000157573 128 ntBASIC3.83□□□□□ -1.8
Use1Q9CQ56 Gm22600-201ENSMUST00000157598 269 ntBASIC3.83□□□□□ -1.8
Use1Q9CQ56 Gm23501-201ENSMUST00000157744 256 ntBASIC3.83□□□□□ -1.8
Use1Q9CQ56 Gm24939-201ENSMUST00000158325 137 ntBASIC3.83□□□□□ -1.8
Use1Q9CQ56 Gm16589-201ENSMUST00000159522 918 ntBASIC3.83□□□□□ -1.8
Use1Q9CQ56 Gm17218-201ENSMUST00000165911 410 ntTSL 3 BASIC3.83□□□□□ -1.8
Use1Q9CQ56 Gm17155-201ENSMUST00000165969 473 ntBASIC3.83□□□□□ -1.8
Use1Q9CQ56 Vmn1r113-201ENSMUST00000168794 894 ntTSL 5 BASIC3.83□□□□□ -1.8
Use1Q9CQ56 Gm18128-201ENSMUST00000172625 511 ntBASIC3.83□□□□□ -1.8
Use1Q9CQ56 Gm20468-201ENSMUST00000172664 452 ntTSL 3 BASIC3.83□□□□□ -1.8
Use1Q9CQ56 Mir5098-201ENSMUST00000175320 82 ntBASIC3.83□□□□□ -1.8
Use1Q9CQ56 Gm5926-201ENSMUST00000177740 711 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Use1Q9CQ56 Spin2e-201ENSMUST00000179716 705 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Use1Q9CQ56 Gm27690-201ENSMUST00000184596 126 ntBASIC3.83□□□□□ -1.8
Use1Q9CQ56 1600010M07Rik-201ENSMUST00000185931 1204 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Use1Q9CQ56 Gm6802-202ENSMUST00000186566 126 ntBASIC3.83□□□□□ -1.8
Use1Q9CQ56 Gm8458-201ENSMUST00000196658 819 ntBASIC3.83□□□□□ -1.8
Use1Q9CQ56 Gm43308-201ENSMUST00000197236 373 ntBASIC3.83□□□□□ -1.8
Use1Q9CQ56 Gm8774-201ENSMUST00000203621 692 ntBASIC3.83□□□□□ -1.8
Use1Q9CQ56 Gm44371-201ENSMUST00000204148 467 ntBASIC3.83□□□□□ -1.8
Use1Q9CQ56 Gm44032-201ENSMUST00000204841 166 ntBASIC3.83□□□□□ -1.8
Use1Q9CQ56 Bc1-ps1-201ENSMUST00000208471 318 ntBASIC3.83□□□□□ -1.8
Use1Q9CQ56 Gm45839-201ENSMUST00000209884 399 ntTSL 5 BASIC3.83□□□□□ -1.8
Use1Q9CQ56 Olfr879-ps1-201ENSMUST00000212455 694 ntBASIC3.83□□□□□ -1.8
Use1Q9CQ56 Gm33091-201ENSMUST00000217798 748 ntTSL 3 BASIC3.83□□□□□ -1.8
Use1Q9CQ56 4930555G07Rik-202ENSMUST00000219879 750 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Use1Q9CQ56 AC132833.3-201ENSMUST00000227472 866 ntBASIC3.83□□□□□ -1.8
Use1Q9CQ56 Gm15773-201ENSMUST00000118665 1448 ntBASIC3.83□□□□□ -1.8
Use1Q9CQ56 Gm18180-201ENSMUST00000187562 1484 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 91.2 ms