Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Gm12677-201ENSMUST00000118668 426 ntBASIC3.66□□□□□ -1.82
Cdh23Q99PF4 Klra11-ps-201ENSMUST00000122033 810 ntBASIC3.66□□□□□ -1.82
Cdh23Q99PF4 Gm20528-202ENSMUST00000174821 802 ntTSL 3 BASIC3.66□□□□□ -1.82
Cdh23Q99PF4 Gm21803-201ENSMUST00000188897 693 ntBASIC3.66□□□□□ -1.82
Cdh23Q99PF4 Gm44773-201ENSMUST00000207374 557 ntBASIC3.66□□□□□ -1.82
Cdh23Q99PF4 AC159252.1-201ENSMUST00000224450 553 ntBASIC3.66□□□□□ -1.82
Cdh23Q99PF4 Gm25205-201ENSMUST00000082841 103 ntBASIC3.66□□□□□ -1.82
Cdh23Q99PF4 Gm29114-201ENSMUST00000187100 2508 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Cdh23Q99PF4 AC154329.1-201ENSMUST00000224408 3129 ntBASIC3.66□□□□□ -1.82
Cdh23Q99PF4 Atm-201ENSMUST00000118282 10006 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Cdh23Q99PF4 Mecom-203ENSMUST00000108271 3851 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
Cdh23Q99PF4 AC153532.2-201ENSMUST00000219753 3844 ntBASIC3.66□□□□□ -1.82
Cdh23Q99PF4 Gm45378-201ENSMUST00000211063 2711 ntBASIC3.66□□□□□ -1.82
Cdh23Q99PF4 AC154634.4-201ENSMUST00000226077 2665 ntBASIC3.66□□□□□ -1.82
Cdh23Q99PF4 Vmn2r-ps56-201ENSMUST00000174814 2596 ntBASIC3.66□□□□□ -1.82
Cdh23Q99PF4 Krtap24-1-201ENSMUST00000052512 1571 ntAPPRIS P1 BASIC3.65□□□□□ -1.82
Cdh23Q99PF4 Arhgef12-201ENSMUST00000072767 10059 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
Cdh23Q99PF4 Gm38207-201ENSMUST00000193009 3505 ntBASIC3.65□□□□□ -1.82
Cdh23Q99PF4 Gm26027-201ENSMUST00000122725 268 ntBASIC3.65□□□□□ -1.82
Cdh23Q99PF4 Gm14697-201ENSMUST00000147144 648 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
Cdh23Q99PF4 Gm15323-201ENSMUST00000156109 429 ntTSL 3 BASIC3.65□□□□□ -1.82
Cdh23Q99PF4 Gm3646-201ENSMUST00000171319 352 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
Cdh23Q99PF4 Gm29334-201ENSMUST00000190334 357 ntBASIC3.65□□□□□ -1.82
Cdh23Q99PF4 Gm42578-201ENSMUST00000199960 194 ntBASIC3.65□□□□□ -1.82
Cdh23Q99PF4 Gm20177-201ENSMUST00000203705 334 ntBASIC3.65□□□□□ -1.82
Cdh23Q99PF4 Tas2r142-ps5-201ENSMUST00000204651 929 ntBASIC3.65□□□□□ -1.82
Cdh23Q99PF4 Gm7540-201ENSMUST00000219764 926 ntBASIC3.65□□□□□ -1.82
Cdh23Q99PF4 Defb9-201ENSMUST00000057076 310 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
Cdh23Q99PF4 Zfy1-202ENSMUST00000189888 2864 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Cdh23Q99PF4 F5-201ENSMUST00000086040 7430 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Cdh23Q99PF4 Olfr295-202ENSMUST00000215365 6013 ntAPPRIS P1 TSL 3 BASIC3.65□□□□□ -1.83
Cdh23Q99PF4 Gm16216-201ENSMUST00000118970 1111 ntBASIC3.65□□□□□ -1.83
Cdh23Q99PF4 Gm5762-201ENSMUST00000119204 258 ntBASIC3.65□□□□□ -1.83
Cdh23Q99PF4 Hspe1-ps6-201ENSMUST00000120275 283 ntBASIC3.65□□□□□ -1.83
Cdh23Q99PF4 Gm15875-201ENSMUST00000152264 273 ntTSL 3 BASIC3.65□□□□□ -1.83
Cdh23Q99PF4 Gm24441-201ENSMUST00000157235 281 ntBASIC3.65□□□□□ -1.83
Cdh23Q99PF4 Mir3075-201ENSMUST00000175340 85 ntBASIC3.65□□□□□ -1.83
Cdh23Q99PF4 Gm8641-201ENSMUST00000186995 826 ntBASIC3.65□□□□□ -1.83
Cdh23Q99PF4 Gm29105-201ENSMUST00000187256 450 ntBASIC3.65□□□□□ -1.83
Cdh23Q99PF4 n-R5s86-201ENSMUST00000083215 119 ntBASIC3.65□□□□□ -1.83
Cdh23Q99PF4 Olfr1383-202ENSMUST00000204706 4168 ntAPPRIS P1 TSL 3 BASIC3.65□□□□□ -1.83
Cdh23Q99PF4 Spag9-204ENSMUST00000092777 6913 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Cdh23Q99PF4 Rorb-201ENSMUST00000040153 8759 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Cdh23Q99PF4 Ccnb3-201ENSMUST00000056725 4475 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Cdh23Q99PF4 Herc1-201ENSMUST00000042824 15153 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Cdh23Q99PF4 Vmn2r-ps47-201ENSMUST00000174515 2557 ntBASIC3.65□□□□□ -1.83
Cdh23Q99PF4 Nbeal1-203ENSMUST00000160834 15731 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Cdh23Q99PF4 Samt2-201ENSMUST00000101137 923 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Cdh23Q99PF4 2010106E10Rik-202ENSMUST00000113412 1276 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Cdh23Q99PF4 Gm15142-201ENSMUST00000121013 856 ntBASIC3.65□□□□□ -1.83
Cdh23Q99PF4 Gm25707-201ENSMUST00000175120 96 ntBASIC3.65□□□□□ -1.83
Cdh23Q99PF4 Nutf2-ps2-201ENSMUST00000179225 384 ntBASIC3.65□□□□□ -1.83
Cdh23Q99PF4 Gm17954-201ENSMUST00000195893 607 ntBASIC3.65□□□□□ -1.83
Cdh23Q99PF4 Gm44261-201ENSMUST00000203337 209 ntBASIC3.65□□□□□ -1.83
Cdh23Q99PF4 AC158807.1-201ENSMUST00000217959 187 ntBASIC3.65□□□□□ -1.83
Cdh23Q99PF4 AC106830.1-201ENSMUST00000228032 1003 ntBASIC3.65□□□□□ -1.83
Cdh23Q99PF4 Olfr586-201ENSMUST00000084811 954 ntAPPRIS P2 BASIC3.65□□□□□ -1.83
Cdh23Q99PF4 Vmn1r30-205ENSMUST00000228635 1776 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Cdh23Q99PF4 Gm6300-201ENSMUST00000192393 1498 ntBASIC3.64□□□□□ -1.83
Cdh23Q99PF4 A230081H15Rik-201ENSMUST00000218326 2929 ntBASIC3.64□□□□□ -1.83
Cdh23Q99PF4 AC154368.2-201ENSMUST00000222334 1724 ntBASIC3.64□□□□□ -1.83
Cdh23Q99PF4 Ascc3-206ENSMUST00000219226 1357 ntTSL 5 BASIC3.64□□□□□ -1.83
Cdh23Q99PF4 Atrx-202ENSMUST00000113573 10275 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Cdh23Q99PF4 Gm12571-201ENSMUST00000118132 243 ntBASIC3.64□□□□□ -1.83
Cdh23Q99PF4 Olfr1050-ps1-201ENSMUST00000119802 947 ntBASIC3.64□□□□□ -1.83
Cdh23Q99PF4 Mir7068-201ENSMUST00000183439 74 ntBASIC3.64□□□□□ -1.83
Cdh23Q99PF4 Gm37490-201ENSMUST00000195566 724 ntBASIC3.64□□□□□ -1.83
Cdh23Q99PF4 1700108N06Rik-201ENSMUST00000196572 681 ntTSL 5 BASIC3.64□□□□□ -1.83
Cdh23Q99PF4 Gm44964-201ENSMUST00000207011 273 ntBASIC3.64□□□□□ -1.83
Cdh23Q99PF4 Gm18306-201ENSMUST00000207338 569 ntBASIC3.64□□□□□ -1.83
Cdh23Q99PF4 Gm18944-201ENSMUST00000207672 643 ntBASIC3.64□□□□□ -1.83
Cdh23Q99PF4 Gm45070-201ENSMUST00000208100 246 ntBASIC3.64□□□□□ -1.83
Cdh23Q99PF4 4930562D21Rik-201ENSMUST00000123894 1750 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Cdh23Q99PF4 Tet2-201ENSMUST00000098603 9179 ntAPPRIS P3 TSL 5 BASIC3.64□□□□□ -1.83
Cdh23Q99PF4 Cfh-201ENSMUST00000066859 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
Cdh23Q99PF4 Gm44822-201ENSMUST00000208559 6389 ntBASIC3.64□□□□□ -1.83
Cdh23Q99PF4 Olfr1501-203ENSMUST00000215350 4395 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Cdh23Q99PF4 Phc3-209ENSMUST00000168645 10976 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
Cdh23Q99PF4 Ino80d-205ENSMUST00000165066 13529 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Cdh23Q99PF4 Gm23668-201ENSMUST00000157465 111 ntBASIC3.64□□□□□ -1.83
Cdh23Q99PF4 Gm24537-201ENSMUST00000157950 102 ntBASIC3.64□□□□□ -1.83
Cdh23Q99PF4 Gm24550-201ENSMUST00000158648 279 ntBASIC3.64□□□□□ -1.83
Cdh23Q99PF4 A930014E01Rik-201ENSMUST00000194572 330 ntBASIC3.64□□□□□ -1.83
Cdh23Q99PF4 Olfr1180-203ENSMUST00000217320 2107 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Cdh23Q99PF4 AC159629.1-201ENSMUST00000220698 568 ntTSL 2 BASIC3.64□□□□□ -1.83
Cdh23Q99PF4 Gm36525-201ENSMUST00000222590 638 ntTSL 5 BASIC3.64□□□□□ -1.83
Cdh23Q99PF4 Olfr357-201ENSMUST00000069578 1092 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Cdh23Q99PF4 Eif1-ps1-201ENSMUST00000086606 330 ntBASIC3.64□□□□□ -1.83
Cdh23Q99PF4 Tbl1xr1-202ENSMUST00000192328 3323 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Cdh23Q99PF4 Gabrg1-201ENSMUST00000031119 4771 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Cdh23Q99PF4 Zfp708-201ENSMUST00000109742 2416 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
Cdh23Q99PF4 AC165080.4-201ENSMUST00000213591 9507 ntTSL 5 BASIC3.64□□□□□ -1.83
Cdh23Q99PF4 Abcd2-201ENSMUST00000069511 5527 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Cdh23Q99PF4 Gm10488-201ENSMUST00000101657 874 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Cdh23Q99PF4 Olfr616-201ENSMUST00000106886 954 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Cdh23Q99PF4 Gm14212-201ENSMUST00000122023 826 ntBASIC3.63□□□□□ -1.83
Cdh23Q99PF4 Gm4836-201ENSMUST00000179874 907 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Cdh23Q99PF4 Gm10096-202ENSMUST00000180207 907 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Cdh23Q99PF4 Gm10487-202ENSMUST00000180344 907 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Cdh23Q99PF4 Gm44941-201ENSMUST00000204216 627 ntTSL 2 BASIC3.63□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms