Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Gm2396-202ENSMUST00000188232 3433 ntTSL 5 BASIC4.21□□□□□ -1.74
Cstf1Q99LC2 Vmn1r47-202ENSMUST00000227229 6733 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Cstf1Q99LC2 Vmn1r47-204ENSMUST00000228680 6717 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Cstf1Q99LC2 Hbp1-204ENSMUST00000175686 1315 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Cstf1Q99LC2 9430018G01Rik-201ENSMUST00000203260 3758 ntTSL 5 BASIC4.2□□□□□ -1.74
Cstf1Q99LC2 Gm45160-201ENSMUST00000207112 3099 ntBASIC4.2□□□□□ -1.74
Cstf1Q99LC2 Akap4-201ENSMUST00000057101 2851 ntAPPRIS P4 TSL 1 (best) BASIC4.2□□□□□ -1.74
Cstf1Q99LC2 Gm6367-201ENSMUST00000178646 2464 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Cstf1Q99LC2 Gm29515-201ENSMUST00000188273 2077 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Cstf1Q99LC2 Gm43594-201ENSMUST00000201153 3442 ntBASIC4.2□□□□□ -1.74
Cstf1Q99LC2 Gm16294-201ENSMUST00000070382 1459 ntTSL 2 BASIC4.2□□□□□ -1.74
Cstf1Q99LC2 CAAA01194877.1-201ENSMUST00000213137 4233 ntBASIC4.2□□□□□ -1.74
Cstf1Q99LC2 Igkv12-98-201ENSMUST00000103327 344 ntAPPRIS ALT2 BASIC4.2□□□□□ -1.74
Cstf1Q99LC2 Gm24987-201ENSMUST00000104453 134 ntBASIC4.2□□□□□ -1.74
Cstf1Q99LC2 Gm11905-201ENSMUST00000117653 678 ntBASIC4.2□□□□□ -1.74
Cstf1Q99LC2 Gm11673-201ENSMUST00000117846 331 ntBASIC4.2□□□□□ -1.74
Cstf1Q99LC2 Gm12387-201ENSMUST00000118573 955 ntBASIC4.2□□□□□ -1.74
Cstf1Q99LC2 Hspe1-ps6-201ENSMUST00000120275 283 ntBASIC4.2□□□□□ -1.74
Cstf1Q99LC2 Rpl27-ps2-201ENSMUST00000120378 399 ntBASIC4.2□□□□□ -1.74
Cstf1Q99LC2 Gm5379-201ENSMUST00000120973 826 ntBASIC4.2□□□□□ -1.74
Cstf1Q99LC2 Gm22514-201ENSMUST00000122547 308 ntBASIC4.2□□□□□ -1.74
Cstf1Q99LC2 6030471H07Rik-201ENSMUST00000125884 492 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Cstf1Q99LC2 Snora81-201ENSMUST00000157310 178 ntBASIC4.2□□□□□ -1.74
Cstf1Q99LC2 Gm24850-201ENSMUST00000158029 119 ntBASIC4.2□□□□□ -1.74
Cstf1Q99LC2 Gm21834-201ENSMUST00000178907 453 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Cstf1Q99LC2 Mir6385-201ENSMUST00000184295 105 ntBASIC4.2□□□□□ -1.74
Cstf1Q99LC2 Gm36971-201ENSMUST00000195244 378 ntTSL 5 BASIC4.2□□□□□ -1.74
Cstf1Q99LC2 Gm37095-201ENSMUST00000195421 205 ntBASIC4.2□□□□□ -1.74
Cstf1Q99LC2 Gm43005-201ENSMUST00000199015 648 ntBASIC4.2□□□□□ -1.74
Cstf1Q99LC2 Gm43039-201ENSMUST00000202883 963 ntBASIC4.2□□□□□ -1.74
Cstf1Q99LC2 CAAA01216754.6-201ENSMUST00000217183 398 ntTSL 5 BASIC4.2□□□□□ -1.74
Cstf1Q99LC2 AC152062.1-201ENSMUST00000218129 386 ntBASIC4.2□□□□□ -1.74
Cstf1Q99LC2 Gm9309-201ENSMUST00000223537 546 ntBASIC4.2□□□□□ -1.74
Cstf1Q99LC2 AC159231.1-201ENSMUST00000225365 226 ntBASIC4.2□□□□□ -1.74
Cstf1Q99LC2 AC140209.1-201ENSMUST00000227875 284 ntBASIC4.2□□□□□ -1.74
Cstf1Q99LC2 Klra7-202ENSMUST00000049304 1075 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
Cstf1Q99LC2 Olfr209-201ENSMUST00000055868 918 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Cstf1Q99LC2 Olfr780-201ENSMUST00000063168 1025 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Cstf1Q99LC2 Olfr507-201ENSMUST00000080014 951 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Cstf1Q99LC2 mt-Nd1-201ENSMUST00000082392 957 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Cstf1Q99LC2 n-R5s54-201ENSMUST00000083837 112 ntBASIC4.2□□□□□ -1.74
Cstf1Q99LC2 Klra7-203ENSMUST00000088011 921 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
Cstf1Q99LC2 Gm45321-201ENSMUST00000209286 2863 ntTSL 5 BASIC4.2□□□□□ -1.74
Cstf1Q99LC2 Gpr21-201ENSMUST00000065441 3619 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Cstf1Q99LC2 Gprc6a-203ENSMUST00000219286 2574 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Cstf1Q99LC2 Vmn2r-ps100-201ENSMUST00000221238 1702 ntBASIC4.2□□□□□ -1.74
Cstf1Q99LC2 Gm43443-201ENSMUST00000202337 2393 ntBASIC4.2□□□□□ -1.74
Cstf1Q99LC2 4921501E09Rik-201ENSMUST00000024121 3916 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Cstf1Q99LC2 Dnah7c-204ENSMUST00000189749 12207 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Cstf1Q99LC2 Gm37900-201ENSMUST00000195510 3805 ntBASIC4.2□□□□□ -1.74
Cstf1Q99LC2 Gm37718-201ENSMUST00000191655 2631 ntBASIC4.2□□□□□ -1.74
Cstf1Q99LC2 Ddi1-201ENSMUST00000051706 7114 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Cstf1Q99LC2 Olfr128-202ENSMUST00000216440 3644 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Cstf1Q99LC2 Gm10340-201ENSMUST00000170790 1755 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Cstf1Q99LC2 Gm7903-201ENSMUST00000113172 3677 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
Cstf1Q99LC2 Gm5128-201ENSMUST00000113173 3677 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Cstf1Q99LC2 Olfr510-203ENSMUST00000216331 3101 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Cstf1Q99LC2 Olfr205-202ENSMUST00000213910 1650 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Cstf1Q99LC2 AC124446.1-201ENSMUST00000221027 2644 ntBASIC4.19□□□□□ -1.74
Cstf1Q99LC2 Olfr351-201ENSMUST00000100150 933 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Cstf1Q99LC2 Chrna1os-201ENSMUST00000125413 680 ntTSL 3 BASIC4.19□□□□□ -1.74
Cstf1Q99LC2 Gm14228-201ENSMUST00000131908 798 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Cstf1Q99LC2 Gm11656-201ENSMUST00000137462 395 ntTSL 5 BASIC4.19□□□□□ -1.74
Cstf1Q99LC2 Gm23391-201ENSMUST00000157579 104 ntBASIC4.19□□□□□ -1.74
Cstf1Q99LC2 Gm22764-201ENSMUST00000158370 92 ntBASIC4.19□□□□□ -1.74
Cstf1Q99LC2 Gm3030-201ENSMUST00000163410 516 ntBASIC4.19□□□□□ -1.74
Cstf1Q99LC2 Gm28314-201ENSMUST00000191276 345 ntBASIC4.19□□□□□ -1.74
Cstf1Q99LC2 Gm34068-201ENSMUST00000193310 632 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Cstf1Q99LC2 Igkv11-118-201ENSMUST00000199448 346 ntBASIC4.19□□□□□ -1.74
Cstf1Q99LC2 Gm44748-201ENSMUST00000206040 658 ntTSL 5 BASIC4.19□□□□□ -1.74
Cstf1Q99LC2 Gm44972-201ENSMUST00000206419 406 ntBASIC4.19□□□□□ -1.74
Cstf1Q99LC2 AC154548.1-201ENSMUST00000225844 3838 ntBASIC4.19□□□□□ -1.74
Cstf1Q99LC2 AC126253.2-201ENSMUST00000226518 205 ntBASIC4.19□□□□□ -1.74
Cstf1Q99LC2 AC134577.1-201ENSMUST00000227572 295 ntBASIC4.19□□□□□ -1.74
Cstf1Q99LC2 Olfr476-201ENSMUST00000077249 933 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Cstf1Q99LC2 Gm24319-201ENSMUST00000083389 107 ntBASIC4.19□□□□□ -1.74
Cstf1Q99LC2 Tas2r121-201ENSMUST00000095395 918 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Cstf1Q99LC2 Vmn2r51-201ENSMUST00000094863 2559 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Cstf1Q99LC2 Gm37747-201ENSMUST00000193717 4003 ntBASIC4.19□□□□□ -1.74
Cstf1Q99LC2 Gm43705-201ENSMUST00000195958 3717 ntBASIC4.19□□□□□ -1.74
Cstf1Q99LC2 Zfp976-203ENSMUST00000187616 1908 ntTSL 5 BASIC4.19□□□□□ -1.74
Cstf1Q99LC2 Esp3-201ENSMUST00000177574 1316 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Cstf1Q99LC2 Gm37323-201ENSMUST00000195771 2773 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Cstf1Q99LC2 Cdh10-201ENSMUST00000040562 3407 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Cstf1Q99LC2 Adam5-201ENSMUST00000050300 2560 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
Cstf1Q99LC2 Gm37397-201ENSMUST00000194579 2842 ntBASIC4.18□□□□□ -1.74
Cstf1Q99LC2 Olfr149-202ENSMUST00000215192 2806 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Cstf1Q99LC2 Vmn1r185-212ENSMUST00000228633 5385 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Cstf1Q99LC2 Gm37831-201ENSMUST00000191685 1787 ntBASIC4.18□□□□□ -1.74
Cstf1Q99LC2 Gm25168-201ENSMUST00000104189 132 ntBASIC4.18□□□□□ -1.74
Cstf1Q99LC2 Gm8666-201ENSMUST00000117517 292 ntBASIC4.18□□□□□ -1.74
Cstf1Q99LC2 Gm15783-201ENSMUST00000117521 633 ntBASIC4.18□□□□□ -1.74
Cstf1Q99LC2 Gm12465-201ENSMUST00000118591 300 ntBASIC4.18□□□□□ -1.74
Cstf1Q99LC2 Gm15313-201ENSMUST00000119179 282 ntBASIC4.18□□□□□ -1.74
Cstf1Q99LC2 Gm23496-201ENSMUST00000157741 248 ntBASIC4.18□□□□□ -1.74
Cstf1Q99LC2 Gm5258-201ENSMUST00000165437 327 ntBASIC4.18□□□□□ -1.74
Cstf1Q99LC2 Gm11983-202ENSMUST00000184940 318 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Cstf1Q99LC2 Gm3496-201ENSMUST00000188283 745 ntBASIC4.18□□□□□ -1.74
Cstf1Q99LC2 Gm38061-201ENSMUST00000192490 365 ntBASIC4.18□□□□□ -1.74
Cstf1Q99LC2 Gm43855-201ENSMUST00000197462 507 ntBASIC4.18□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms