Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm28151-201ENSMUST00000189404 951 ntBASIC4.92□□□□□ -1.62
Clrn1Q8K445 Gm29389-201ENSMUST00000191562 352 ntBASIC4.92□□□□□ -1.62
Clrn1Q8K445 Gm33206-201ENSMUST00000193544 454 ntTSL 2 BASIC4.92□□□□□ -1.62
Clrn1Q8K445 Gm37882-201ENSMUST00000195254 196 ntBASIC4.92□□□□□ -1.62
Clrn1Q8K445 Gm37404-201ENSMUST00000195726 359 ntBASIC4.92□□□□□ -1.62
Clrn1Q8K445 Gm43238-201ENSMUST00000196463 359 ntBASIC4.92□□□□□ -1.62
Clrn1Q8K445 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
Clrn1Q8K445 Gm43554-201ENSMUST00000199987 186 ntBASIC4.92□□□□□ -1.62
Clrn1Q8K445 Olfr1430-ps1-201ENSMUST00000207422 917 ntBASIC4.92□□□□□ -1.62
Clrn1Q8K445 Olfr200-ps1-201ENSMUST00000207964 874 ntBASIC4.92□□□□□ -1.62
Clrn1Q8K445 Olfr512-202ENSMUST00000209620 1056 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Clrn1Q8K445 Gm7786-201ENSMUST00000210494 436 ntBASIC4.92□□□□□ -1.62
Clrn1Q8K445 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Clrn1Q8K445 AC153532.2-201ENSMUST00000219753 3844 ntBASIC4.92□□□□□ -1.62
Clrn1Q8K445 AC157494.1-201ENSMUST00000221127 549 ntTSL 5 BASIC4.92□□□□□ -1.62
Clrn1Q8K445 AC153662.1-201ENSMUST00000222220 270 ntBASIC4.92□□□□□ -1.62
Clrn1Q8K445 AC173481.1-201ENSMUST00000223351 270 ntBASIC4.92□□□□□ -1.62
Clrn1Q8K445 AC102291.2-201ENSMUST00000228083 367 ntBASIC4.92□□□□□ -1.62
Clrn1Q8K445 AC127371.1-201ENSMUST00000228516 312 ntBASIC4.92□□□□□ -1.62
Clrn1Q8K445 CT030238.4-201ENSMUST00000228579 801 ntBASIC4.92□□□□□ -1.62
Clrn1Q8K445 Tas2r123-201ENSMUST00000071696 1002 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Clrn1Q8K445 Olfr924-201ENSMUST00000072977 927 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Clrn1Q8K445 Gm10061-201ENSMUST00000073111 465 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Clrn1Q8K445 Olfr512-201ENSMUST00000074730 1056 ntBASIC4.92□□□□□ -1.62
Clrn1Q8K445 Mir133b-201ENSMUST00000083546 119 ntBASIC4.92□□□□□ -1.62
Clrn1Q8K445 Smr2-201ENSMUST00000087043 676 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
Clrn1Q8K445 Olfr1048-201ENSMUST00000099900 963 ntAPPRIS P2 BASIC4.92□□□□□ -1.62
Clrn1Q8K445 Fam126b-207ENSMUST00000161600 8685 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Clrn1Q8K445 Trim38-201ENSMUST00000074067 1480 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Clrn1Q8K445 Olfr890-202ENSMUST00000213458 5475 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Clrn1Q8K445 Npsr1-201ENSMUST00000059650 3791 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Clrn1Q8K445 Zfp101-201ENSMUST00000167107 2735 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Clrn1Q8K445 Zfand6-201ENSMUST00000069537 1658 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Clrn1Q8K445 Clec9a-201ENSMUST00000058352 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
Clrn1Q8K445 4930402H24Rik-203ENSMUST00000119422 3815 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
Clrn1Q8K445 Cntnap5b-201ENSMUST00000086738 4027 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
Clrn1Q8K445 Lrrtm4-202ENSMUST00000126005 3733 ntTSL 5 BASIC4.92□□□□□ -1.62
Clrn1Q8K445 3222401L13Rik-202ENSMUST00000192137 6292 ntBASIC4.92□□□□□ -1.62
Clrn1Q8K445 Olfr461-202ENSMUST00000215009 4292 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Clrn1Q8K445 Crem-230ENSMUST00000151311 2485 ntAPPRIS ALT1 TSL 5 BASIC4.91□□□□□ -1.62
Clrn1Q8K445 Zfp871-201ENSMUST00000057501 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
Clrn1Q8K445 Acsl4-204ENSMUST00000112907 5137 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Clrn1Q8K445 Tmem45a2-201ENSMUST00000067173 3073 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
Clrn1Q8K445 Gabra3-202ENSMUST00000114554 1790 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
Clrn1Q8K445 Gm43011-201ENSMUST00000197897 4433 ntBASIC4.91□□□□□ -1.62
Clrn1Q8K445 Mnat1-202ENSMUST00000187549 3688 ntTSL 5 BASIC4.91□□□□□ -1.62
Clrn1Q8K445 Vmn2r24-201ENSMUST00000075095 2565 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Clrn1Q8K445 F630028O10Rik-201ENSMUST00000133125 2771 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Clrn1Q8K445 Cyp2c40-201ENSMUST00000160476 1803 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Clrn1Q8K445 Olfr1493-ps1-202ENSMUST00000208667 1828 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Clrn1Q8K445 Gm5796-201ENSMUST00000096184 1817 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Clrn1Q8K445 Gm43024-201ENSMUST00000196770 4352 ntBASIC4.91□□□□□ -1.62
Clrn1Q8K445 Vmn2r85-201ENSMUST00000171811 3042 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Clrn1Q8K445 Cfap70-203ENSMUST00000056073 3615 ntAPPRIS P4 TSL 1 (best) BASIC4.91□□□□□ -1.62
Clrn1Q8K445 Igkv6-17-201ENSMUST00000103391 377 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Clrn1Q8K445 Gm24374-201ENSMUST00000104394 106 ntBASIC4.91□□□□□ -1.62
Clrn1Q8K445 Gm25563-201ENSMUST00000104603 74 ntBASIC4.91□□□□□ -1.62
Clrn1Q8K445 Gm14401-203ENSMUST00000108970 948 ntAPPRIS P1 TSL 3 BASIC4.91□□□□□ -1.62
Clrn1Q8K445 Mir466j-201ENSMUST00000116876 122 ntBASIC4.91□□□□□ -1.62
Clrn1Q8K445 Gm14307-201ENSMUST00000118930 291 ntBASIC4.91□□□□□ -1.62
Clrn1Q8K445 Gm14871-201ENSMUST00000119056 194 ntBASIC4.91□□□□□ -1.62
Clrn1Q8K445 Gm17014-201ENSMUST00000120765 168 ntBASIC4.91□□□□□ -1.62
Clrn1Q8K445 Gm11254-201ENSMUST00000122368 653 ntBASIC4.91□□□□□ -1.62
Clrn1Q8K445 Gm5401-201ENSMUST00000122444 365 ntBASIC4.91□□□□□ -1.62
Clrn1Q8K445 Gm12569-202ENSMUST00000126189 796 ntTSL 5 BASIC4.91□□□□□ -1.62
Clrn1Q8K445 Gm14297-201ENSMUST00000129110 291 ntBASIC4.91□□□□□ -1.62
Clrn1Q8K445 Gm25334-201ENSMUST00000158036 110 ntBASIC4.91□□□□□ -1.62
Clrn1Q8K445 Gm24901-201ENSMUST00000158125 110 ntBASIC4.91□□□□□ -1.62
Clrn1Q8K445 Gm23028-201ENSMUST00000158773 265 ntBASIC4.91□□□□□ -1.62
Clrn1Q8K445 Gm24175-201ENSMUST00000158931 129 ntBASIC4.91□□□□□ -1.62
Clrn1Q8K445 Gm7609-204ENSMUST00000161424 461 ntBASIC4.91□□□□□ -1.62
Clrn1Q8K445 Gm21999-201ENSMUST00000165985 387 ntBASIC4.91□□□□□ -1.62
Clrn1Q8K445 Gm17919-201ENSMUST00000173344 312 ntBASIC4.91□□□□□ -1.62
Clrn1Q8K445 Lgals1-ps1-201ENSMUST00000173500 368 ntBASIC4.91□□□□□ -1.62
Clrn1Q8K445 Gm20701-201ENSMUST00000176082 347 ntBASIC4.91□□□□□ -1.62
Clrn1Q8K445 Gm20647-201ENSMUST00000176396 857 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Clrn1Q8K445 Vmn2r-ps10-201ENSMUST00000176836 898 ntBASIC4.91□□□□□ -1.62
Clrn1Q8K445 Vmn2r-ps8-201ENSMUST00000177088 898 ntBASIC4.91□□□□□ -1.62
Clrn1Q8K445 Gm22584-201ENSMUST00000177935 92 ntBASIC4.91□□□□□ -1.62
Clrn1Q8K445 Gm21244-201ENSMUST00000178447 684 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Clrn1Q8K445 Cox6b2-209ENSMUST00000184143 435 ntTSL 2 BASIC4.91□□□□□ -1.62
Clrn1Q8K445 Mir6401-201ENSMUST00000184499 109 ntBASIC4.91□□□□□ -1.62
Clrn1Q8K445 Ssxb8-202ENSMUST00000185125 559 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Clrn1Q8K445 Gm28843-201ENSMUST00000189198 678 ntBASIC4.91□□□□□ -1.62
Clrn1Q8K445 Gm29546-201ENSMUST00000191171 678 ntBASIC4.91□□□□□ -1.62
Clrn1Q8K445 Ighv1-27-201ENSMUST00000194473 340 ntBASIC4.91□□□□□ -1.62
Clrn1Q8K445 Gm37760-201ENSMUST00000194726 3841 ntBASIC4.91□□□□□ -1.62
Clrn1Q8K445 Gm33952-201ENSMUST00000197795 408 ntBASIC4.91□□□□□ -1.62
Clrn1Q8K445 Gm42542-201ENSMUST00000197978 268 ntBASIC4.91□□□□□ -1.62
Clrn1Q8K445 Gm43941-201ENSMUST00000203303 1073 ntBASIC4.91□□□□□ -1.62
Clrn1Q8K445 Gm44048-201ENSMUST00000204531 361 ntBASIC4.91□□□□□ -1.62
Clrn1Q8K445 AC134333.1-201ENSMUST00000204536 944 ntBASIC4.91□□□□□ -1.62
Clrn1Q8K445 Gm45427-201ENSMUST00000209572 1253 ntBASIC4.91□□□□□ -1.62
Clrn1Q8K445 AC159380.1-201ENSMUST00000218096 121 ntBASIC4.91□□□□□ -1.62
Clrn1Q8K445 AC192333.1-201ENSMUST00000224573 376 ntBASIC4.91□□□□□ -1.62
Clrn1Q8K445 AL606513.1-201ENSMUST00000225369 579 ntBASIC4.91□□□□□ -1.62
Clrn1Q8K445 Vmn1r31-204ENSMUST00000226390 912 ntAPPRIS P2 BASIC4.91□□□□□ -1.62
Clrn1Q8K445 CT030704.1-201ENSMUST00000227521 699 ntBASIC4.91□□□□□ -1.62
Clrn1Q8K445 AC125539.2-201ENSMUST00000228339 753 ntBASIC4.91□□□□□ -1.62
Clrn1Q8K445 C130073F10Rik-201ENSMUST00000051043 913 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms