Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 AC126275.1-201ENSMUST00000224881 446 ntBASIC5.56□□□□□ -1.52
Brf1Q8CFK2 AC154840.1-201ENSMUST00000225216 408 ntBASIC5.56□□□□□ -1.52
Brf1Q8CFK2 Prr32-201ENSMUST00000040002 1110 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Brf1Q8CFK2 Olfr808-201ENSMUST00000060636 939 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Brf1Q8CFK2 Sult2a6-201ENSMUST00000076576 961 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Brf1Q8CFK2 Olfr805-201ENSMUST00000078876 960 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Brf1Q8CFK2 Olfr482-201ENSMUST00000081184 972 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Brf1Q8CFK2 Gm25821-201ENSMUST00000093657 133 ntBASIC5.56□□□□□ -1.52
Brf1Q8CFK2 AC122357.2-201ENSMUST00000220732 1525 ntBASIC5.56□□□□□ -1.52
Brf1Q8CFK2 Dbpht2-202ENSMUST00000221311 5341 ntBASIC5.56□□□□□ -1.52
Brf1Q8CFK2 Pik3c2g-209ENSMUST00000187618 2023 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Brf1Q8CFK2 Hrnr-202ENSMUST00000093774 11187 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Brf1Q8CFK2 Vmn1r189-202ENSMUST00000227357 3245 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Brf1Q8CFK2 Gm38375-201ENSMUST00000194610 2227 ntBASIC5.56□□□□□ -1.52
Brf1Q8CFK2 Tfpi-201ENSMUST00000028487 1492 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Brf1Q8CFK2 Xist-201ENSMUST00000127786 17769 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Brf1Q8CFK2 Xirp2-202ENSMUST00000112347 11979 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Brf1Q8CFK2 Mlip-205ENSMUST00000183955 3069 ntAPPRIS P5 TSL 5 BASIC5.56□□□□□ -1.52
Brf1Q8CFK2 Olfr1338-203ENSMUST00000216559 2829 ntAPPRIS ALT1 TSL 5 BASIC5.56□□□□□ -1.52
Brf1Q8CFK2 Gm16579-201ENSMUST00000161985 2566 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Brf1Q8CFK2 Vmn1r81-204ENSMUST00000228482 13495 ntAPPRIS ALT2 BASIC5.56□□□□□ -1.52
Brf1Q8CFK2 A430027C01Rik-201ENSMUST00000194599 1644 ntBASIC5.56□□□□□ -1.52
Brf1Q8CFK2 March1-203ENSMUST00000098708 4000 ntAPPRIS P3 TSL 5 BASIC5.55□□□□□ -1.52
Brf1Q8CFK2 Abcg3-202ENSMUST00000130644 2668 ntTSL 5 BASIC5.55□□□□□ -1.52
Brf1Q8CFK2 Olfr963-202ENSMUST00000215649 2203 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Brf1Q8CFK2 Elavl4-205ENSMUST00000106600 3799 ntTSL 5 BASIC5.55□□□□□ -1.52
Brf1Q8CFK2 Vmn1r235-201ENSMUST00000060603 1781 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Brf1Q8CFK2 Gm37598-201ENSMUST00000194506 1301 ntBASIC5.55□□□□□ -1.52
Brf1Q8CFK2 Gm44109-201ENSMUST00000204514 1954 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Brf1Q8CFK2 Zc4h2-203ENSMUST00000120620 2156 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Brf1Q8CFK2 Gm20342-201ENSMUST00000185480 9720 ntBASIC5.55□□□□□ -1.52
Brf1Q8CFK2 Gm15592-201ENSMUST00000143135 1707 ntTSL 3 BASIC5.55□□□□□ -1.52
Brf1Q8CFK2 Lrriq3-202ENSMUST00000192383 1717 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Brf1Q8CFK2 Gm23193-201ENSMUST00000102427 82 ntBASIC5.55□□□□□ -1.52
Brf1Q8CFK2 Gm22498-201ENSMUST00000104497 86 ntBASIC5.55□□□□□ -1.52
Brf1Q8CFK2 Mir190b-201ENSMUST00000104803 80 ntBASIC5.55□□□□□ -1.52
Brf1Q8CFK2 Gm6592-201ENSMUST00000115563 507 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Brf1Q8CFK2 Gm15382-201ENSMUST00000118011 537 ntBASIC5.55□□□□□ -1.52
Brf1Q8CFK2 Gm15206-201ENSMUST00000119143 454 ntBASIC5.55□□□□□ -1.52
Brf1Q8CFK2 Gm11404-201ENSMUST00000120872 494 ntBASIC5.55□□□□□ -1.52
Brf1Q8CFK2 Gm13009-201ENSMUST00000121307 267 ntBASIC5.55□□□□□ -1.52
Brf1Q8CFK2 Gm11200-201ENSMUST00000121698 448 ntBASIC5.55□□□□□ -1.52
Brf1Q8CFK2 Zfp965-204ENSMUST00000143490 297 ntTSL 5 BASIC5.55□□□□□ -1.52
Brf1Q8CFK2 Gm11466-201ENSMUST00000148017 291 ntTSL 3 BASIC5.55□□□□□ -1.52
Brf1Q8CFK2 Gm22383-201ENSMUST00000158188 327 ntBASIC5.55□□□□□ -1.52
Brf1Q8CFK2 Klrc1-204ENSMUST00000169545 676 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Brf1Q8CFK2 Mir3090-201ENSMUST00000175597 87 ntBASIC5.55□□□□□ -1.52
Brf1Q8CFK2 Vmn2r-ps23-201ENSMUST00000178719 571 ntBASIC5.55□□□□□ -1.52
Brf1Q8CFK2 Esp24-201ENSMUST00000180245 207 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Brf1Q8CFK2 Scgb1b6-ps-201ENSMUST00000185337 199 ntBASIC5.55□□□□□ -1.52
Brf1Q8CFK2 Gm28997-201ENSMUST00000188759 429 ntBASIC5.55□□□□□ -1.52
Brf1Q8CFK2 Gm29598-201ENSMUST00000188996 588 ntBASIC5.55□□□□□ -1.52
Brf1Q8CFK2 Gm28550-201ENSMUST00000189125 618 ntTSL 5 BASIC5.55□□□□□ -1.52
Brf1Q8CFK2 Gm29341-201ENSMUST00000190179 370 ntTSL 5 BASIC5.55□□□□□ -1.52
Brf1Q8CFK2 Gm28460-202ENSMUST00000190590 618 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Brf1Q8CFK2 Gm18775-201ENSMUST00000190763 586 ntBASIC5.55□□□□□ -1.52
Brf1Q8CFK2 Gm29130-201ENSMUST00000191015 618 ntTSL 5 BASIC5.55□□□□□ -1.52
Brf1Q8CFK2 Gm37727-201ENSMUST00000191637 819 ntBASIC5.55□□□□□ -1.52
Brf1Q8CFK2 Gm37881-201ENSMUST00000193001 421 ntBASIC5.55□□□□□ -1.52
Brf1Q8CFK2 Gm42476-201ENSMUST00000198860 554 ntTSL 3 BASIC5.55□□□□□ -1.52
Brf1Q8CFK2 Gm19237-201ENSMUST00000205036 1132 ntBASIC5.55□□□□□ -1.52
Brf1Q8CFK2 Gm30954-201ENSMUST00000208715 1210 ntTSL 5 BASIC5.55□□□□□ -1.52
Brf1Q8CFK2 Gm19096-201ENSMUST00000209705 766 ntBASIC5.55□□□□□ -1.52
Brf1Q8CFK2 Gm45639-201ENSMUST00000211205 710 ntTSL 5 BASIC5.55□□□□□ -1.52
Brf1Q8CFK2 Gm8681-201ENSMUST00000219115 618 ntBASIC5.55□□□□□ -1.52
Brf1Q8CFK2 Gm8288-201ENSMUST00000223406 593 ntBASIC5.55□□□□□ -1.52
Brf1Q8CFK2 AC173482.2-201ENSMUST00000224044 750 ntBASIC5.55□□□□□ -1.52
Brf1Q8CFK2 Capza3-201ENSMUST00000043797 1222 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Brf1Q8CFK2 Zfp825-201ENSMUST00000074369 822 ntTSL 5 BASIC5.55□□□□□ -1.52
Brf1Q8CFK2 Olfr382-201ENSMUST00000092921 939 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Brf1Q8CFK2 Olfr893-201ENSMUST00000093867 942 ntAPPRIS P2 BASIC5.55□□□□□ -1.52
Brf1Q8CFK2 Clca4c-ps-201ENSMUST00000098551 712 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Brf1Q8CFK2 Olfr1302-203ENSMUST00000215244 2729 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
Brf1Q8CFK2 4930579C12Rik-202ENSMUST00000187015 3676 ntTSL 2 BASIC5.55□□□□□ -1.52
Brf1Q8CFK2 Olfr1484-203ENSMUST00000215567 3699 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Brf1Q8CFK2 Olfr655-203ENSMUST00000215538 2012 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Brf1Q8CFK2 Olfr622-202ENSMUST00000213536 2219 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Brf1Q8CFK2 Rbm41-202ENSMUST00000087400 2229 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Brf1Q8CFK2 Olfr1311-202ENSMUST00000213602 2631 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Brf1Q8CFK2 Gm42842-201ENSMUST00000197736 3004 ntBASIC5.55□□□□□ -1.52
Brf1Q8CFK2 Vmn1r217-202ENSMUST00000227110 9888 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Brf1Q8CFK2 Olfr1152-202ENSMUST00000213308 6201 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Brf1Q8CFK2 Zfp788-202ENSMUST00000098508 3775 ntAPPRIS P5 TSL 1 (best) BASIC5.55□□□□□ -1.52
Brf1Q8CFK2 Nfatc3-202ENSMUST00000211991 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Brf1Q8CFK2 Olfr1118-202ENSMUST00000216396 4976 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
Brf1Q8CFK2 Olfr391-ps-201ENSMUST00000214485 2080 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
Brf1Q8CFK2 Olfr584-202ENSMUST00000214215 3152 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Brf1Q8CFK2 Nxt2-201ENSMUST00000042329 2447 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
Brf1Q8CFK2 Gm10635-201ENSMUST00000217201 3721 ntTSL 2 BASIC5.54□□□□□ -1.52
Brf1Q8CFK2 Olfr552-202ENSMUST00000215712 4206 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Brf1Q8CFK2 Gm23014-201ENSMUST00000104144 130 ntBASIC5.54□□□□□ -1.52
Brf1Q8CFK2 Spata17-202ENSMUST00000110945 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Brf1Q8CFK2 Vps29-203ENSMUST00000118765 713 ntTSL 3 BASIC5.54□□□□□ -1.52
Brf1Q8CFK2 Gm13745-201ENSMUST00000121994 527 ntBASIC5.54□□□□□ -1.52
Brf1Q8CFK2 Gm24517-201ENSMUST00000122560 107 ntBASIC5.54□□□□□ -1.52
Brf1Q8CFK2 Gm15241-201ENSMUST00000125700 474 ntTSL 3 BASIC5.54□□□□□ -1.52
Brf1Q8CFK2 Gm27192-201ENSMUST00000136428 581 ntTSL 3 BASIC5.54□□□□□ -1.52
Brf1Q8CFK2 1700046C09Rik-201ENSMUST00000139973 543 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Brf1Q8CFK2 Gm24211-201ENSMUST00000158264 107 ntBASIC5.54□□□□□ -1.52
Brf1Q8CFK2 1700058P15Rik-201ENSMUST00000159981 413 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 87 ms