Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm16383-201ENSMUST00000118122 232 ntBASIC4.94□□□□□ -1.62
Nup88Q8CEC0 Hmgb1-ps1-201ENSMUST00000119350 634 ntBASIC4.94□□□□□ -1.62
Nup88Q8CEC0 Gm12564-201ENSMUST00000119860 321 ntBASIC4.94□□□□□ -1.62
Nup88Q8CEC0 Nectin3-204ENSMUST00000119941 529 ntTSL 3 BASIC4.94□□□□□ -1.62
Nup88Q8CEC0 Gm14800-201ENSMUST00000122084 1272 ntBASIC4.94□□□□□ -1.62
Nup88Q8CEC0 Gm13860-201ENSMUST00000125185 452 ntTSL 3 BASIC4.94□□□□□ -1.62
Nup88Q8CEC0 Gm15344-201ENSMUST00000152600 421 ntTSL 3 BASIC4.94□□□□□ -1.62
Nup88Q8CEC0 Vmn2r-ps74-201ENSMUST00000174705 917 ntBASIC4.94□□□□□ -1.62
Nup88Q8CEC0 Gm22392-201ENSMUST00000177971 107 ntBASIC4.94□□□□□ -1.62
Nup88Q8CEC0 Gm24417-201ENSMUST00000178123 79 ntBASIC4.94□□□□□ -1.62
Nup88Q8CEC0 Gm24653-201ENSMUST00000178541 79 ntBASIC4.94□□□□□ -1.62
Nup88Q8CEC0 Gm25934-201ENSMUST00000178642 79 ntBASIC4.94□□□□□ -1.62
Nup88Q8CEC0 Gm26824-201ENSMUST00000180506 1164 ntTSL 5 BASIC4.94□□□□□ -1.62
Nup88Q8CEC0 1700041C23Rik-201ENSMUST00000185243 395 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Nup88Q8CEC0 Gm29031-201ENSMUST00000185316 614 ntBASIC4.94□□□□□ -1.62
Nup88Q8CEC0 Gm29000-201ENSMUST00000185444 614 ntBASIC4.94□□□□□ -1.62
Nup88Q8CEC0 Gm28204-201ENSMUST00000185934 614 ntBASIC4.94□□□□□ -1.62
Nup88Q8CEC0 Gm28290-201ENSMUST00000186505 614 ntBASIC4.94□□□□□ -1.62
Nup88Q8CEC0 Gm28161-201ENSMUST00000186669 614 ntBASIC4.94□□□□□ -1.62
Nup88Q8CEC0 Gm17916-202ENSMUST00000187634 1187 ntBASIC4.94□□□□□ -1.62
Nup88Q8CEC0 Gm20812-202ENSMUST00000189550 1230 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Nup88Q8CEC0 Gm28749-209ENSMUST00000189599 614 ntBASIC4.94□□□□□ -1.62
Nup88Q8CEC0 Gm33163-201ENSMUST00000194504 614 ntBASIC4.94□□□□□ -1.62
Nup88Q8CEC0 Gm42990-201ENSMUST00000199231 312 ntBASIC4.94□□□□□ -1.62
Nup88Q8CEC0 Gm43645-201ENSMUST00000200129 341 ntTSL 2 BASIC4.94□□□□□ -1.62
Nup88Q8CEC0 Gm44009-201ENSMUST00000203539 521 ntTSL 5 BASIC4.94□□□□□ -1.62
Nup88Q8CEC0 Gm45639-201ENSMUST00000211205 710 ntTSL 5 BASIC4.94□□□□□ -1.62
Nup88Q8CEC0 Gm35552-201ENSMUST00000214355 396 ntTSL 5 BASIC4.94□□□□□ -1.62
Nup88Q8CEC0 Gm18016-201ENSMUST00000216119 801 ntBASIC4.94□□□□□ -1.62
Nup88Q8CEC0 AC139294.1-201ENSMUST00000226708 571 ntBASIC4.94□□□□□ -1.62
Nup88Q8CEC0 Gm21994-201ENSMUST00000063463 990 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Nup88Q8CEC0 Vmn1r80-201ENSMUST00000075053 927 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Nup88Q8CEC0 Tdo2-201ENSMUST00000029645 3431 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Nup88Q8CEC0 Olfr112-204ENSMUST00000208832 3173 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Nup88Q8CEC0 Gm43871-201ENSMUST00000204931 1955 ntBASIC4.94□□□□□ -1.62
Nup88Q8CEC0 Gm38065-201ENSMUST00000193147 3492 ntBASIC4.94□□□□□ -1.62
Nup88Q8CEC0 Olfr470-203ENSMUST00000220193 3080 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Nup88Q8CEC0 AI314180-203ENSMUST00000107557 4946 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
Nup88Q8CEC0 Olfr187-202ENSMUST00000207673 1322 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
Nup88Q8CEC0 A630033H20Rik-201ENSMUST00000067249 3004 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Nup88Q8CEC0 Plcb4-201ENSMUST00000035646 3635 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Nup88Q8CEC0 Olfr716-207ENSMUST00000216871 4062 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Nup88Q8CEC0 Gm23322-201ENSMUST00000104464 167 ntBASIC4.93□□□□□ -1.62
Nup88Q8CEC0 Snora64-201ENSMUST00000104521 134 ntBASIC4.93□□□□□ -1.62
Nup88Q8CEC0 Gm15001-201ENSMUST00000117657 795 ntBASIC4.93□□□□□ -1.62
Nup88Q8CEC0 Gm15021-201ENSMUST00000117832 742 ntBASIC4.93□□□□□ -1.62
Nup88Q8CEC0 Gm14599-201ENSMUST00000120469 474 ntBASIC4.93□□□□□ -1.62
Nup88Q8CEC0 Clec2f-201ENSMUST00000121051 374 ntBASIC4.93□□□□□ -1.62
Nup88Q8CEC0 Gm12340-201ENSMUST00000121617 462 ntBASIC4.93□□□□□ -1.62
Nup88Q8CEC0 4931428L18Rik-202ENSMUST00000135245 889 ntAPPRIS P5 TSL 1 (best) BASIC4.93□□□□□ -1.62
Nup88Q8CEC0 Gm28709-201ENSMUST00000186967 456 ntTSL 5 BASIC4.93□□□□□ -1.62
Nup88Q8CEC0 Mug-ps1-203ENSMUST00000190643 655 ntTSL 3 BASIC4.93□□□□□ -1.62
Nup88Q8CEC0 Gm29478-201ENSMUST00000191272 688 ntTSL 3 BASIC4.93□□□□□ -1.62
Nup88Q8CEC0 Gm44354-201ENSMUST00000196017 143 ntBASIC4.93□□□□□ -1.62
Nup88Q8CEC0 4930458B22Rik-201ENSMUST00000209339 754 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Nup88Q8CEC0 Gm18320-201ENSMUST00000211304 595 ntBASIC4.93□□□□□ -1.62
Nup88Q8CEC0 Arl2bp-203ENSMUST00000211858 318 ntTSL 5 BASIC4.93□□□□□ -1.62
Nup88Q8CEC0 Olfr892-ps1-201ENSMUST00000211998 932 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Nup88Q8CEC0 Gm16381-201ENSMUST00000220528 503 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Nup88Q8CEC0 AC192334.1-201ENSMUST00000221832 1268 ntTSL 5 BASIC4.93□□□□□ -1.62
Nup88Q8CEC0 CT030657.1-201ENSMUST00000222397 378 ntTSL 5 BASIC4.93□□□□□ -1.62
Nup88Q8CEC0 Gm2001-201ENSMUST00000223236 503 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Nup88Q8CEC0 AC134864.1-201ENSMUST00000226326 511 ntBASIC4.93□□□□□ -1.62
Nup88Q8CEC0 Oog3-201ENSMUST00000050933 1865 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Nup88Q8CEC0 Olfr310-201ENSMUST00000081918 1082 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Nup88Q8CEC0 Gm26203-201ENSMUST00000082911 114 ntBASIC4.93□□□□□ -1.62
Nup88Q8CEC0 Eif1-ps1-201ENSMUST00000086606 330 ntBASIC4.93□□□□□ -1.62
Nup88Q8CEC0 Olfr390-201ENSMUST00000092919 936 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Nup88Q8CEC0 Vmn1r43-205ENSMUST00000228709 12646 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Nup88Q8CEC0 Gm13757-201ENSMUST00000126038 4460 ntAPPRIS P1 TSL 3 BASIC4.93□□□□□ -1.62
Nup88Q8CEC0 Zfp595-203ENSMUST00000168892 4040 ntAPPRIS P2 TSL 1 (best) BASIC4.93□□□□□ -1.62
Nup88Q8CEC0 Gm43844-201ENSMUST00000202926 5605 ntBASIC4.93□□□□□ -1.62
Nup88Q8CEC0 2700016F22Rik-201ENSMUST00000181556 3605 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Nup88Q8CEC0 Vmn2r93-201ENSMUST00000079206 2574 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Nup88Q8CEC0 Gpm6a-201ENSMUST00000033915 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Nup88Q8CEC0 Olfr1471-205ENSMUST00000217482 1545 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Nup88Q8CEC0 Gm37668-201ENSMUST00000193745 1944 ntBASIC4.92□□□□□ -1.62
Nup88Q8CEC0 Olfr183-204ENSMUST00000214831 1906 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Nup88Q8CEC0 Fap-202ENSMUST00000102732 2751 ntAPPRIS P2 TSL 1 (best) BASIC4.92□□□□□ -1.62
Nup88Q8CEC0 Igkv11-125-201ENSMUST00000103311 350 ntAPPRIS ALT2 BASIC4.92□□□□□ -1.62
Nup88Q8CEC0 Gm22472-201ENSMUST00000104115 134 ntBASIC4.92□□□□□ -1.62
Nup88Q8CEC0 Mier1-203ENSMUST00000106855 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
Nup88Q8CEC0 Prl-202ENSMUST00000110369 895 ntAPPRIS P2 TSL 1 (best) BASIC4.92□□□□□ -1.62
Nup88Q8CEC0 Gm13550-201ENSMUST00000118185 525 ntBASIC4.92□□□□□ -1.62
Nup88Q8CEC0 Gm12387-201ENSMUST00000118573 955 ntBASIC4.92□□□□□ -1.62
Nup88Q8CEC0 Gm14383-201ENSMUST00000121637 386 ntBASIC4.92□□□□□ -1.62
Nup88Q8CEC0 Gm13335-201ENSMUST00000129994 471 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Nup88Q8CEC0 Gm11775-201ENSMUST00000136500 773 ntTSL 5 BASIC4.92□□□□□ -1.62
Nup88Q8CEC0 2210408F21Rik-206ENSMUST00000138653 417 ntTSL 5 BASIC4.92□□□□□ -1.62
Nup88Q8CEC0 Gm17732-201ENSMUST00000163259 821 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Nup88Q8CEC0 Esp15-201ENSMUST00000178929 1168 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Nup88Q8CEC0 Gm11983-202ENSMUST00000184940 318 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Nup88Q8CEC0 Gm28924-201ENSMUST00000190012 241 ntBASIC4.92□□□□□ -1.62
Nup88Q8CEC0 4930503O07Rik-201ENSMUST00000193395 578 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Nup88Q8CEC0 Trbv11-201ENSMUST00000194354 260 ntBASIC4.92□□□□□ -1.62
Nup88Q8CEC0 Gm37134-201ENSMUST00000195810 628 ntTSL 3 BASIC4.92□□□□□ -1.62
Nup88Q8CEC0 Gm22897-201ENSMUST00000197860 128 ntBASIC4.92□□□□□ -1.62
Nup88Q8CEC0 Olfr1295-202ENSMUST00000207786 1043 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Nup88Q8CEC0 Olfr897-ps1-201ENSMUST00000213589 935 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Nup88Q8CEC0 Trdn-202ENSMUST00000217779 1182 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 107.2 ms