Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 AC132112.1-201ENSMUST00000226354 505 ntBASIC6.49□□□□□ -1.37
Usp40Q8BWR4 Ear-ps9-202ENSMUST00000226796 245 ntBASIC6.49□□□□□ -1.37
Usp40Q8BWR4 H2al1o-201ENSMUST00000079952 509 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Usp40Q8BWR4 n-R5s152-201ENSMUST00000093641 119 ntBASIC6.49□□□□□ -1.37
Usp40Q8BWR4 Olfr665-203ENSMUST00000216257 2298 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Usp40Q8BWR4 Gm12185-202ENSMUST00000094476 5264 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Usp40Q8BWR4 Cd180-204ENSMUST00000171267 1787 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Usp40Q8BWR4 Slc26a3-201ENSMUST00000001254 2908 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Usp40Q8BWR4 Gm43577-201ENSMUST00000197090 3344 ntBASIC6.48□□□□□ -1.37
Usp40Q8BWR4 1700017N19Rik-210ENSMUST00000218464 1597 ntTSL 5 BASIC6.48□□□□□ -1.37
Usp40Q8BWR4 Olfr1328-202ENSMUST00000215312 5038 ntAPPRIS ALT1 TSL 5 BASIC6.48□□□□□ -1.37
Usp40Q8BWR4 AC153494.1-201ENSMUST00000218664 3041 ntBASIC6.48□□□□□ -1.37
Usp40Q8BWR4 Platr21-201ENSMUST00000126339 3511 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Usp40Q8BWR4 St18-213ENSMUST00000163727 5604 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Usp40Q8BWR4 Gm4070-202ENSMUST00000176467 9007 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Usp40Q8BWR4 Gvin1-202ENSMUST00000183409 9005 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Usp40Q8BWR4 Gm24608-201ENSMUST00000104381 136 ntBASIC6.48□□□□□ -1.37
Usp40Q8BWR4 Gm14688-201ENSMUST00000119169 303 ntBASIC6.48□□□□□ -1.37
Usp40Q8BWR4 Gm12837-201ENSMUST00000120131 373 ntBASIC6.48□□□□□ -1.37
Usp40Q8BWR4 Gm15328-201ENSMUST00000144006 2977 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Usp40Q8BWR4 4930548K13Rik-201ENSMUST00000154459 561 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Usp40Q8BWR4 Gm3091-201ENSMUST00000163408 484 ntBASIC6.48□□□□□ -1.37
Usp40Q8BWR4 1700071M16Rik-201ENSMUST00000164150 537 ntTSL 3 BASIC6.48□□□□□ -1.37
Usp40Q8BWR4 Gm17571-201ENSMUST00000167906 90 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Usp40Q8BWR4 Gm27599-201ENSMUST00000183758 174 ntBASIC6.48□□□□□ -1.37
Usp40Q8BWR4 Mir6899-201ENSMUST00000184798 64 ntBASIC6.48□□□□□ -1.37
Usp40Q8BWR4 Gm37712-201ENSMUST00000194295 647 ntTSL 3 BASIC6.48□□□□□ -1.37
Usp40Q8BWR4 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Usp40Q8BWR4 Gm18442-201ENSMUST00000220925 639 ntBASIC6.48□□□□□ -1.37
Usp40Q8BWR4 AC124356.2-201ENSMUST00000221874 336 ntBASIC6.48□□□□□ -1.37
Usp40Q8BWR4 Samt4-201ENSMUST00000026029 963 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Usp40Q8BWR4 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC6.48□□□□□ -1.37
Usp40Q8BWR4 Gm23875-201ENSMUST00000083711 318 ntBASIC6.48□□□□□ -1.37
Usp40Q8BWR4 Med14-203ENSMUST00000115481 3729 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Usp40Q8BWR4 Diaph2-202ENSMUST00000113320 8196 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
Usp40Q8BWR4 Ankrd34c-201ENSMUST00000060700 5457 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Usp40Q8BWR4 2310057J18Rik-202ENSMUST00000140558 1445 ntTSL 5 BASIC6.48□□□□□ -1.37
Usp40Q8BWR4 A930017M01Rik-205ENSMUST00000227721 4167 ntBASIC6.48□□□□□ -1.37
Usp40Q8BWR4 Gm11251-201ENSMUST00000119593 2800 ntBASIC6.48□□□□□ -1.37
Usp40Q8BWR4 Oog4-202ENSMUST00000073641 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Usp40Q8BWR4 Zfp874b-201ENSMUST00000019572 3744 ntAPPRIS P1 TSL 3 BASIC6.48□□□□□ -1.37
Usp40Q8BWR4 Senp7-202ENSMUST00000089360 4802 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
Usp40Q8BWR4 Vmn1r39-201ENSMUST00000226217 2258 ntAPPRIS P2 BASIC6.47□□□□□ -1.37
Usp40Q8BWR4 Vmn1r39-205ENSMUST00000228008 2283 ntAPPRIS ALT2 BASIC6.47□□□□□ -1.37
Usp40Q8BWR4 Spam1-201ENSMUST00000031693 2013 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Usp40Q8BWR4 Kbtbd8-202ENSMUST00000119582 4518 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Usp40Q8BWR4 Xiap-202ENSMUST00000055483 6374 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Usp40Q8BWR4 Gm16579-201ENSMUST00000161985 2566 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Usp40Q8BWR4 Serpinb9e-201ENSMUST00000071873 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Usp40Q8BWR4 Gm12386-201ENSMUST00000117380 688 ntBASIC6.47□□□□□ -1.37
Usp40Q8BWR4 Gm12820-201ENSMUST00000119233 342 ntBASIC6.47□□□□□ -1.37
Usp40Q8BWR4 Gm12881-201ENSMUST00000121191 203 ntBASIC6.47□□□□□ -1.37
Usp40Q8BWR4 Mir1903-201ENSMUST00000122574 80 ntBASIC6.47□□□□□ -1.37
Usp40Q8BWR4 Gm15344-201ENSMUST00000152600 421 ntTSL 3 BASIC6.47□□□□□ -1.37
Usp40Q8BWR4 Gm17732-201ENSMUST00000163259 821 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Usp40Q8BWR4 Gm8220-203ENSMUST00000177877 381 ntTSL 5 BASIC6.47□□□□□ -1.37
Usp40Q8BWR4 Gm10719-203ENSMUST00000179272 675 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
Usp40Q8BWR4 Gm21850-201ENSMUST00000179792 359 ntBASIC6.47□□□□□ -1.37
Usp40Q8BWR4 Gm7976-201ENSMUST00000181507 1242 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Usp40Q8BWR4 Gm27007-201ENSMUST00000183264 279 ntTSL 3 BASIC6.47□□□□□ -1.37
Usp40Q8BWR4 Mir6926-201ENSMUST00000184562 68 ntBASIC6.47□□□□□ -1.37
Usp40Q8BWR4 Ly6c1-203ENSMUST00000185200 540 ntTSL 2 BASIC6.47□□□□□ -1.37
Usp40Q8BWR4 Gm28685-201ENSMUST00000187545 1101 ntBASIC6.47□□□□□ -1.37
Usp40Q8BWR4 Gm28357-201ENSMUST00000190256 622 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Usp40Q8BWR4 Gm8861-201ENSMUST00000196346 832 ntBASIC6.47□□□□□ -1.37
Usp40Q8BWR4 Gm43828-201ENSMUST00000196890 639 ntBASIC6.47□□□□□ -1.37
Usp40Q8BWR4 Gm42567-201ENSMUST00000199268 352 ntTSL 3 BASIC6.47□□□□□ -1.37
Usp40Q8BWR4 Gm43224-201ENSMUST00000201567 898 ntBASIC6.47□□□□□ -1.37
Usp40Q8BWR4 Gm44003-201ENSMUST00000203024 490 ntBASIC6.47□□□□□ -1.37
Usp40Q8BWR4 Gm43979-201ENSMUST00000203179 475 ntBASIC6.47□□□□□ -1.37
Usp40Q8BWR4 Mitf-208ENSMUST00000203938 1074 ntTSL 5 BASIC6.47□□□□□ -1.37
Usp40Q8BWR4 Gm5581-202ENSMUST00000204992 714 ntTSL 3 BASIC6.47□□□□□ -1.37
Usp40Q8BWR4 Gm44993-201ENSMUST00000208435 842 ntTSL 3 BASIC6.47□□□□□ -1.37
Usp40Q8BWR4 Gm44991-201ENSMUST00000208669 479 ntTSL 3 BASIC6.47□□□□□ -1.37
Usp40Q8BWR4 Gm19219-201ENSMUST00000215863 724 ntBASIC6.47□□□□□ -1.37
Usp40Q8BWR4 Gm18225-201ENSMUST00000216708 742 ntBASIC6.47□□□□□ -1.37
Usp40Q8BWR4 AC160962.1-203ENSMUST00000225167 1105 ntAPPRIS P5 BASIC6.47□□□□□ -1.37
Usp40Q8BWR4 AC123061.2-201ENSMUST00000226234 802 ntBASIC6.47□□□□□ -1.37
Usp40Q8BWR4 Capza3-201ENSMUST00000043797 1222 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Usp40Q8BWR4 Cypt3-201ENSMUST00000056754 666 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
Usp40Q8BWR4 Gm25578-201ENSMUST00000083406 104 ntBASIC6.47□□□□□ -1.37
Usp40Q8BWR4 Gm37607-201ENSMUST00000194925 2623 ntBASIC6.47□□□□□ -1.37
Usp40Q8BWR4 Serpini1-201ENSMUST00000029423 4091 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Usp40Q8BWR4 Rfx3-202ENSMUST00000165566 9146 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Usp40Q8BWR4 Gm21778-202ENSMUST00000185926 1482 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Usp40Q8BWR4 Olfr1131-203ENSMUST00000216756 1459 ntTSL 3 BASIC6.47□□□□□ -1.37
Usp40Q8BWR4 Glb1l3-201ENSMUST00000034448 2468 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
Usp40Q8BWR4 AC115891.1-201ENSMUST00000215798 1755 ntBASIC6.46□□□□□ -1.37
Usp40Q8BWR4 Dgkk-201ENSMUST00000067410 7155 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
Usp40Q8BWR4 Olfr668-202ENSMUST00000215359 3613 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.37
Usp40Q8BWR4 Zp3r-202ENSMUST00000128128 1926 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.37
Usp40Q8BWR4 Ryr3-211ENSMUST00000208290 15468 ntAPPRIS P3 TSL 5 BASIC6.46□□□□□ -1.37
Usp40Q8BWR4 Olfr1262-202ENSMUST00000111508 6068 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.37
Usp40Q8BWR4 Ascc3-206ENSMUST00000219226 1357 ntTSL 5 BASIC6.46□□□□□ -1.37
Usp40Q8BWR4 Gm43462-201ENSMUST00000200265 3648 ntBASIC6.46□□□□□ -1.38
Usp40Q8BWR4 Gm23709-201ENSMUST00000104364 130 ntBASIC6.46□□□□□ -1.38
Usp40Q8BWR4 Gm14575-201ENSMUST00000117210 560 ntBASIC6.46□□□□□ -1.38
Usp40Q8BWR4 Gm14788-201ENSMUST00000119457 375 ntBASIC6.46□□□□□ -1.38
Usp40Q8BWR4 Gm11575-201ENSMUST00000122243 228 ntBASIC6.46□□□□□ -1.38
Usp40Q8BWR4 Gm25913-201ENSMUST00000157617 135 ntBASIC6.46□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms