Protein–RNA interactions for Protein: Q62233

Six3, Homeobox protein SIX3, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six3Q62233 1700109I08Rik-201ENSMUST00000185680 396 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Six3Q62233 Gm7634-201ENSMUST00000185778 553 ntBASIC4.14□□□□□ -1.75
Six3Q62233 Gm28263-201ENSMUST00000185884 400 ntBASIC4.14□□□□□ -1.75
Six3Q62233 Gm42502-201ENSMUST00000198550 1089 ntBASIC4.14□□□□□ -1.75
Six3Q62233 Gm6051-201ENSMUST00000201529 352 ntBASIC4.14□□□□□ -1.75
Six3Q62233 4930598N05Rik-204ENSMUST00000207733 675 ntTSL 3 BASIC4.14□□□□□ -1.75
Six3Q62233 Gm45458-201ENSMUST00000209900 522 ntBASIC4.14□□□□□ -1.75
Six3Q62233 Gm45651-201ENSMUST00000210857 335 ntBASIC4.14□□□□□ -1.75
Six3Q62233 Olfr907-202ENSMUST00000214003 1235 ntAPPRIS P1 TSL 3 BASIC4.14□□□□□ -1.75
Six3Q62233 AC153526.4-201ENSMUST00000217713 379 ntBASIC4.14□□□□□ -1.75
Six3Q62233 Gm18242-201ENSMUST00000218455 542 ntBASIC4.14□□□□□ -1.75
Six3Q62233 AC117240.2-201ENSMUST00000220921 263 ntBASIC4.14□□□□□ -1.75
Six3Q62233 AC154248.2-201ENSMUST00000221964 659 ntTSL 5 BASIC4.14□□□□□ -1.75
Six3Q62233 AL662807.1-201ENSMUST00000224183 126 ntBASIC4.14□□□□□ -1.75
Six3Q62233 CT025552.2-201ENSMUST00000225497 317 ntBASIC4.14□□□□□ -1.75
Six3Q62233 Pate4-201ENSMUST00000034610 1072 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Six3Q62233 Gm23628-201ENSMUST00000082464 173 ntBASIC4.14□□□□□ -1.75
Six3Q62233 Gm23464-201ENSMUST00000083145 147 ntBASIC4.14□□□□□ -1.75
Six3Q62233 n-R5s151-201ENSMUST00000083959 119 ntBASIC4.14□□□□□ -1.75
Six3Q62233 AL589737.1-201ENSMUST00000221163 2763 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Six3Q62233 Gm36298-201ENSMUST00000223394 1732 ntBASIC4.14□□□□□ -1.75
Six3Q62233 Cd28-201ENSMUST00000027165 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Six3Q62233 Gm44562-201ENSMUST00000207194 1347 ntBASIC4.14□□□□□ -1.75
Six3Q62233 Olfr646-202ENSMUST00000214099 3778 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Six3Q62233 Vmn1r167-202ENSMUST00000227713 2677 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Six3Q62233 Kcnb2-201ENSMUST00000170146 14845 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Six3Q62233 Olfr1143-202ENSMUST00000099852 2028 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Six3Q62233 Olfr716-207ENSMUST00000216871 4062 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Six3Q62233 Gm43662-201ENSMUST00000198310 2271 ntBASIC4.14□□□□□ -1.75
Six3Q62233 AC126673.1-201ENSMUST00000223208 3856 ntBASIC4.14□□□□□ -1.75
Six3Q62233 Zfp300-201ENSMUST00000040667 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Six3Q62233 2310003L06Rik-201ENSMUST00000007601 1603 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Six3Q62233 Gm44860-201ENSMUST00000208473 2346 ntBASIC4.13□□□□□ -1.75
Six3Q62233 AI314180-203ENSMUST00000107557 4946 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
Six3Q62233 5830444F18Rik-201ENSMUST00000194009 1992 ntBASIC4.13□□□□□ -1.75
Six3Q62233 AC160130.1-201ENSMUST00000220734 2735 ntBASIC4.13□□□□□ -1.75
Six3Q62233 Gm21119-201ENSMUST00000178438 2522 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Six3Q62233 Gm14403-201ENSMUST00000108940 774 ntTSL 5 BASIC4.13□□□□□ -1.75
Six3Q62233 Gm14403-202ENSMUST00000108947 1209 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Six3Q62233 Gm14050-201ENSMUST00000117052 346 ntBASIC4.13□□□□□ -1.75
Six3Q62233 Gm14142-201ENSMUST00000117833 296 ntBASIC4.13□□□□□ -1.75
Six3Q62233 Arl6-203ENSMUST00000118438 875 ntTSL 3 BASIC4.13□□□□□ -1.75
Six3Q62233 Gm11404-201ENSMUST00000120872 494 ntBASIC4.13□□□□□ -1.75
Six3Q62233 Gm15488-201ENSMUST00000121682 670 ntBASIC4.13□□□□□ -1.75
Six3Q62233 Gm12317-201ENSMUST00000122307 319 ntBASIC4.13□□□□□ -1.75
Six3Q62233 Gm22514-201ENSMUST00000122547 308 ntBASIC4.13□□□□□ -1.75
Six3Q62233 Gm23465-201ENSMUST00000157134 262 ntBASIC4.13□□□□□ -1.75
Six3Q62233 Gm24875-201ENSMUST00000158888 104 ntBASIC4.13□□□□□ -1.75
Six3Q62233 Gm16430-201ENSMUST00000169006 615 ntAPPRIS P1 TSL 3 BASIC4.13□□□□□ -1.75
Six3Q62233 Vmn2r-ps126-201ENSMUST00000176711 1149 ntBASIC4.13□□□□□ -1.75
Six3Q62233 Gm27222-201ENSMUST00000183398 427 ntTSL 5 BASIC4.13□□□□□ -1.75
Six3Q62233 Gm19503-201ENSMUST00000187109 241 ntBASIC4.13□□□□□ -1.75
Six3Q62233 Gm38046-201ENSMUST00000192733 550 ntBASIC4.13□□□□□ -1.75
Six3Q62233 2610001A08Rik-201ENSMUST00000193315 867 ntBASIC4.13□□□□□ -1.75
Six3Q62233 1700012D16Rik-201ENSMUST00000197231 577 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Six3Q62233 Gm43710-201ENSMUST00000199583 452 ntBASIC4.13□□□□□ -1.75
Six3Q62233 Gm2861-201ENSMUST00000199885 666 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Six3Q62233 Gm42474-201ENSMUST00000201073 505 ntBASIC4.13□□□□□ -1.75
Six3Q62233 4930487D11Rik-201ENSMUST00000201983 295 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Six3Q62233 4930587E11Rik-202ENSMUST00000204857 807 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Six3Q62233 Gm38991-201ENSMUST00000205504 138 ntTSL 5 BASIC4.13□□□□□ -1.75
Six3Q62233 Gm19366-201ENSMUST00000206996 156 ntBASIC4.13□□□□□ -1.75
Six3Q62233 AC122210.1-201ENSMUST00000217923 675 ntTSL 3 BASIC4.13□□□□□ -1.75
Six3Q62233 Gm40598-201ENSMUST00000222953 547 ntBASIC4.13□□□□□ -1.75
Six3Q62233 Gm7093-201ENSMUST00000223004 581 ntBASIC4.13□□□□□ -1.75
Six3Q62233 Zmym2-202ENSMUST00000223669 1281 ntBASIC4.13□□□□□ -1.75
Six3Q62233 CT571256.1-201ENSMUST00000226045 585 ntBASIC4.13□□□□□ -1.75
Six3Q62233 CT573086.3-201ENSMUST00000228762 594 ntBASIC4.13□□□□□ -1.75
Six3Q62233 Olfr1123-201ENSMUST00000054974 972 ntAPPRIS P2 BASIC4.13□□□□□ -1.75
Six3Q62233 Olfr1442-201ENSMUST00000057924 1065 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Six3Q62233 Olfr622-201ENSMUST00000058744 1105 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Six3Q62233 Gm22575-201ENSMUST00000082981 110 ntBASIC4.13□□□□□ -1.75
Six3Q62233 4932429P05Rik-201ENSMUST00000113958 3093 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Six3Q62233 Cdr1-201ENSMUST00000166381 2313 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Six3Q62233 Plcb4-201ENSMUST00000035646 3635 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Six3Q62233 Cntn3-201ENSMUST00000032159 5183 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
Six3Q62233 Phf11c-201ENSMUST00000166912 3459 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Six3Q62233 Rnf128-202ENSMUST00000113027 2641 ntTSL 5 BASIC4.12□□□□□ -1.75
Six3Q62233 Rab30-201ENSMUST00000032879 9456 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Six3Q62233 Gm29260-201ENSMUST00000186391 2759 ntTSL 3 BASIC4.12□□□□□ -1.75
Six3Q62233 Vmn1r42-202ENSMUST00000226436 4045 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Six3Q62233 Vmn1r72-202ENSMUST00000209638 6501 ntAPPRIS P1 TSL 3 BASIC4.12□□□□□ -1.75
Six3Q62233 Gm7709-201ENSMUST00000199391 1858 ntBASIC4.12□□□□□ -1.75
Six3Q62233 Rps15a-ps8-201ENSMUST00000117914 387 ntBASIC4.12□□□□□ -1.75
Six3Q62233 Gm14933-201ENSMUST00000118840 481 ntBASIC4.12□□□□□ -1.75
Six3Q62233 Gm12287-201ENSMUST00000119770 707 ntBASIC4.12□□□□□ -1.75
Six3Q62233 Gm14599-201ENSMUST00000120469 474 ntBASIC4.12□□□□□ -1.75
Six3Q62233 2610024D14Rik-201ENSMUST00000121233 294 ntBASIC4.12□□□□□ -1.75
Six3Q62233 Gm12340-201ENSMUST00000121617 462 ntBASIC4.12□□□□□ -1.75
Six3Q62233 Gm14122-201ENSMUST00000122076 973 ntBASIC4.12□□□□□ -1.75
Six3Q62233 Rpl39-ps-202ENSMUST00000146505 151 ntBASIC4.12□□□□□ -1.75
Six3Q62233 Gm25606-201ENSMUST00000158363 95 ntBASIC4.12□□□□□ -1.75
Six3Q62233 Gm22156-201ENSMUST00000158409 141 ntBASIC4.12□□□□□ -1.75
Six3Q62233 Gm25264-201ENSMUST00000158519 117 ntBASIC4.12□□□□□ -1.75
Six3Q62233 Gm17416-201ENSMUST00000163724 201 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Six3Q62233 Gm9587-201ENSMUST00000172449 454 ntBASIC4.12□□□□□ -1.75
Six3Q62233 Gm18604-201ENSMUST00000172535 558 ntBASIC4.12□□□□□ -1.75
Six3Q62233 Gm26954-201ENSMUST00000182106 622 ntTSL 3 BASIC4.12□□□□□ -1.75
Six3Q62233 Gm29320-201ENSMUST00000185235 615 ntBASIC4.12□□□□□ -1.75
Six3Q62233 Gm29179-202ENSMUST00000186138 615 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 85.5 ms