Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Gm44682-201ENSMUST00000208501 2614 ntBASIC3.32□□□□□ -1.88
Trav5d-4Q5R1F6 Ankar-201ENSMUST00000053499 4571 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
Trav5d-4Q5R1F6 Gm3972-201ENSMUST00000173960 2861 ntBASIC3.32□□□□□ -1.88
Trav5d-4Q5R1F6 Gm42447-201ENSMUST00000200102 2903 ntBASIC3.32□□□□□ -1.88
Trav5d-4Q5R1F6 Mcmdc2-204ENSMUST00000140948 3249 ntTSL 5 BASIC3.32□□□□□ -1.88
Trav5d-4Q5R1F6 Olfr986-202ENSMUST00000214763 3274 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Trav5d-4Q5R1F6 Olfr575-203ENSMUST00000216420 3500 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Trav5d-4Q5R1F6 Mir551b-201ENSMUST00000102165 98 ntBASIC3.32□□□□□ -1.88
Trav5d-4Q5R1F6 Gm23063-201ENSMUST00000102350 93 ntBASIC3.32□□□□□ -1.88
Trav5d-4Q5R1F6 Ighv1-34-201ENSMUST00000103512 388 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Trav5d-4Q5R1F6 Gm17106-201ENSMUST00000105610 459 ntTSL 5 BASIC3.32□□□□□ -1.88
Trav5d-4Q5R1F6 Gm15148-201ENSMUST00000117602 156 ntBASIC3.32□□□□□ -1.88
Trav5d-4Q5R1F6 Gm13831-201ENSMUST00000118764 302 ntBASIC3.32□□□□□ -1.88
Trav5d-4Q5R1F6 Olfr336-ps1-201ENSMUST00000120897 940 ntBASIC3.32□□□□□ -1.88
Trav5d-4Q5R1F6 Gm11645-201ENSMUST00000121589 649 ntBASIC3.32□□□□□ -1.88
Trav5d-4Q5R1F6 Gm9003-201ENSMUST00000121810 482 ntBASIC3.32□□□□□ -1.88
Trav5d-4Q5R1F6 Gm15075-201ENSMUST00000122187 477 ntBASIC3.32□□□□□ -1.88
Trav5d-4Q5R1F6 Gm13868-201ENSMUST00000122411 294 ntBASIC3.32□□□□□ -1.88
Trav5d-4Q5R1F6 Gm15643-201ENSMUST00000126556 383 ntTSL 3 BASIC3.32□□□□□ -1.88
Trav5d-4Q5R1F6 Gm25386-201ENSMUST00000157814 288 ntBASIC3.32□□□□□ -1.88
Trav5d-4Q5R1F6 Gm5263-201ENSMUST00000163646 601 ntBASIC3.32□□□□□ -1.88
Trav5d-4Q5R1F6 H2al2c-201ENSMUST00000163651 336 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Trav5d-4Q5R1F6 H2al2b-201ENSMUST00000168551 336 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Trav5d-4Q5R1F6 Gm17177-201ENSMUST00000169144 483 ntBASIC3.32□□□□□ -1.88
Trav5d-4Q5R1F6 Gm5726-201ENSMUST00000173886 924 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Trav5d-4Q5R1F6 Gm8677-201ENSMUST00000174637 924 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Trav5d-4Q5R1F6 Mir6414-201ENSMUST00000183685 82 ntBASIC3.32□□□□□ -1.88
Trav5d-4Q5R1F6 Il6st-204ENSMUST00000183829 612 ntTSL 5 BASIC3.32□□□□□ -1.88
Trav5d-4Q5R1F6 Mir7031-201ENSMUST00000183860 65 ntBASIC3.32□□□□□ -1.88
Trav5d-4Q5R1F6 Trdv1-202ENSMUST00000187163 334 ntAPPRIS ALT2 BASIC3.32□□□□□ -1.88
Trav5d-4Q5R1F6 Gm29405-201ENSMUST00000187204 370 ntTSL 5 BASIC3.32□□□□□ -1.88
Trav5d-4Q5R1F6 Gm28615-201ENSMUST00000187527 482 ntBASIC3.32□□□□□ -1.88
Trav5d-4Q5R1F6 Gm29557-201ENSMUST00000188245 370 ntTSL 5 BASIC3.32□□□□□ -1.88
Trav5d-4Q5R1F6 AV026068-210ENSMUST00000189169 877 ntTSL 5 BASIC3.32□□□□□ -1.88
Trav5d-4Q5R1F6 1700024B18Rik-201ENSMUST00000190088 423 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Trav5d-4Q5R1F6 Gm28174-201ENSMUST00000191003 370 ntTSL 5 BASIC3.32□□□□□ -1.88
Trav5d-4Q5R1F6 1700027A15Rik-205ENSMUST00000191122 332 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Trav5d-4Q5R1F6 Gm30280-201ENSMUST00000192214 262 ntBASIC3.32□□□□□ -1.88
Trav5d-4Q5R1F6 Gm37111-201ENSMUST00000193250 634 ntBASIC3.32□□□□□ -1.88
Trav5d-4Q5R1F6 Mir1892-201ENSMUST00000197752 80 ntBASIC3.32□□□□□ -1.88
Trav5d-4Q5R1F6 Gm43084-201ENSMUST00000200696 947 ntBASIC3.32□□□□□ -1.88
Trav5d-4Q5R1F6 Gm10445-201ENSMUST00000203521 762 ntTSL 2 BASIC3.32□□□□□ -1.88
Trav5d-4Q5R1F6 Gm44852-201ENSMUST00000207950 369 ntBASIC3.32□□□□□ -1.88
Trav5d-4Q5R1F6 Lyrm1-209ENSMUST00000208424 888 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Trav5d-4Q5R1F6 Gm45317-201ENSMUST00000210385 223 ntBASIC3.32□□□□□ -1.88
Trav5d-4Q5R1F6 Olfr964-ps1-201ENSMUST00000217577 914 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Trav5d-4Q5R1F6 AC153917.1-201ENSMUST00000218959 856 ntTSL 5 BASIC3.32□□□□□ -1.88
Trav5d-4Q5R1F6 Pah-204ENSMUST00000219813 789 ntTSL 3 BASIC3.32□□□□□ -1.88
Trav5d-4Q5R1F6 AC138330.1-201ENSMUST00000220690 1127 ntTSL 5 BASIC3.32□□□□□ -1.88
Trav5d-4Q5R1F6 AC117949.2-201ENSMUST00000225900 584 ntBASIC3.32□□□□□ -1.88
Trav5d-4Q5R1F6 Prl2a1-201ENSMUST00000023602 884 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Trav5d-4Q5R1F6 Gm28044-201ENSMUST00000044819 551 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
Trav5d-4Q5R1F6 Olfr827-201ENSMUST00000058123 1058 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Trav5d-4Q5R1F6 Olfr943-201ENSMUST00000071617 1079 ntAPPRIS P2 TSL 3 BASIC3.32□□□□□ -1.88
Trav5d-4Q5R1F6 Gm23518-201ENSMUST00000082835 153 ntBASIC3.32□□□□□ -1.88
Trav5d-4Q5R1F6 Gm23443-201ENSMUST00000082916 128 ntBASIC3.32□□□□□ -1.88
Trav5d-4Q5R1F6 Mir30e-201ENSMUST00000083475 92 ntBASIC3.32□□□□□ -1.88
Trav5d-4Q5R1F6 Gabra6-202ENSMUST00000109286 1554 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
Trav5d-4Q5R1F6 Gm42728-201ENSMUST00000202644 1552 ntBASIC3.32□□□□□ -1.88
Trav5d-4Q5R1F6 Lrrtm2-201ENSMUST00000091636 5665 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Trav5d-4Q5R1F6 A830011K09Rik-202ENSMUST00000162868 2201 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Trav5d-4Q5R1F6 Oog1-202ENSMUST00000222112 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
Trav5d-4Q5R1F6 Gm38260-201ENSMUST00000193573 3995 ntBASIC3.32□□□□□ -1.88
Trav5d-4Q5R1F6 Gm37498-201ENSMUST00000193524 4002 ntBASIC3.32□□□□□ -1.88
Trav5d-4Q5R1F6 Macc1-204ENSMUST00000222058 4193 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Trav5d-4Q5R1F6 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
Trav5d-4Q5R1F6 Olfr715-202ENSMUST00000214919 5114 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Trav5d-4Q5R1F6 Mecom-203ENSMUST00000108271 3851 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
Trav5d-4Q5R1F6 Olfr112-205ENSMUST00000213274 3558 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Trav5d-4Q5R1F6 AC154677.1-201ENSMUST00000227636 2805 ntBASIC3.31□□□□□ -1.88
Trav5d-4Q5R1F6 Zscan4f-202ENSMUST00000145237 1829 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Trav5d-4Q5R1F6 Cd200r3-209ENSMUST00000166731 3876 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
Trav5d-4Q5R1F6 Trdv5-201ENSMUST00000103685 438 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Trav5d-4Q5R1F6 Gm23948-201ENSMUST00000104030 132 ntBASIC3.31□□□□□ -1.88
Trav5d-4Q5R1F6 Snord65-201ENSMUST00000104269 72 ntBASIC3.31□□□□□ -1.88
Trav5d-4Q5R1F6 Gm9078-201ENSMUST00000119126 617 ntBASIC3.31□□□□□ -1.88
Trav5d-4Q5R1F6 Gm12757-201ENSMUST00000119465 800 ntBASIC3.31□□□□□ -1.88
Trav5d-4Q5R1F6 Gm15364-201ENSMUST00000119618 585 ntBASIC3.31□□□□□ -1.88
Trav5d-4Q5R1F6 Gm14559-201ENSMUST00000121745 496 ntBASIC3.31□□□□□ -1.88
Trav5d-4Q5R1F6 Gm11403-201ENSMUST00000122195 369 ntBASIC3.31□□□□□ -1.88
Trav5d-4Q5R1F6 Tarbp2-207ENSMUST00000142114 420 ntTSL 5 BASIC3.31□□□□□ -1.88
Trav5d-4Q5R1F6 Gm24014-201ENSMUST00000157728 157 ntBASIC3.31□□□□□ -1.88
Trav5d-4Q5R1F6 Gm7241-201ENSMUST00000159853 357 ntBASIC3.31□□□□□ -1.88
Trav5d-4Q5R1F6 Vmn2r-ps122-201ENSMUST00000176687 906 ntBASIC3.31□□□□□ -1.88
Trav5d-4Q5R1F6 Gm11394-201ENSMUST00000181421 517 ntBASIC3.31□□□□□ -1.88
Trav5d-4Q5R1F6 Gm21232-201ENSMUST00000182187 1006 ntBASIC3.31□□□□□ -1.88
Trav5d-4Q5R1F6 Mir6938-201ENSMUST00000184173 63 ntBASIC3.31□□□□□ -1.88
Trav5d-4Q5R1F6 Gm29327-201ENSMUST00000188229 388 ntTSL 5 BASIC3.31□□□□□ -1.88
Trav5d-4Q5R1F6 Gm28763-201ENSMUST00000188870 166 ntTSL 5 BASIC3.31□□□□□ -1.88
Trav5d-4Q5R1F6 Gm29387-201ENSMUST00000189074 623 ntTSL 3 BASIC3.31□□□□□ -1.88
Trav5d-4Q5R1F6 Gm29579-201ENSMUST00000190820 166 ntTSL 5 BASIC3.31□□□□□ -1.88
Trav5d-4Q5R1F6 Gm21006-201ENSMUST00000196930 667 ntBASIC3.31□□□□□ -1.88
Trav5d-4Q5R1F6 Gm45727-201ENSMUST00000212886 572 ntBASIC3.31□□□□□ -1.88
Trav5d-4Q5R1F6 Gm30198-201ENSMUST00000222873 824 ntTSL 2 BASIC3.31□□□□□ -1.88
Trav5d-4Q5R1F6 CT025536.1-201ENSMUST00000226744 844 ntBASIC3.31□□□□□ -1.88
Trav5d-4Q5R1F6 Gm25147-201ENSMUST00000083030 105 ntBASIC3.31□□□□□ -1.88
Trav5d-4Q5R1F6 n-R5s54-201ENSMUST00000083837 112 ntBASIC3.31□□□□□ -1.88
Trav5d-4Q5R1F6 Olfr392-201ENSMUST00000118463 3643 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
Trav5d-4Q5R1F6 Olfr133-204ENSMUST00000215549 2944 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Trav5d-4Q5R1F6 Cbll1-204ENSMUST00000185739 3945 ntAPPRIS ALT1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms