Protein–RNA interactions for Protein: Q5NCC9

Trim58, E3 ubiquitin-protein ligase TRIM58, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim58Q5NCC9 Gm14299-201ENSMUST00000117586 397 ntBASIC4.83□□□□□ -1.64
Trim58Q5NCC9 Gm24550-201ENSMUST00000158648 279 ntBASIC4.83□□□□□ -1.64
Trim58Q5NCC9 H2al2c-201ENSMUST00000163651 336 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Trim58Q5NCC9 Sult2a4-202ENSMUST00000165167 964 ntAPPRIS P2 TSL 5 BASIC4.83□□□□□ -1.64
Trim58Q5NCC9 Vmn1r174-201ENSMUST00000167551 942 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Trim58Q5NCC9 H2al2b-201ENSMUST00000168551 336 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Trim58Q5NCC9 Vmn1r173-201ENSMUST00000174055 942 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Trim58Q5NCC9 Gm20693-201ENSMUST00000177431 211 ntBASIC4.83□□□□□ -1.64
Trim58Q5NCC9 Tppp2-202ENSMUST00000177625 627 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
Trim58Q5NCC9 Gm15099-201ENSMUST00000179833 573 ntTSL 5 BASIC4.83□□□□□ -1.64
Trim58Q5NCC9 9330185C12Rik-201ENSMUST00000180837 1009 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Trim58Q5NCC9 Gm29380-201ENSMUST00000185898 416 ntTSL 5 BASIC4.83□□□□□ -1.64
Trim58Q5NCC9 1700007K09Rik-202ENSMUST00000188899 680 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Trim58Q5NCC9 4930533P14Rik-201ENSMUST00000189056 583 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Trim58Q5NCC9 AI506816-203ENSMUST00000198461 503 ntTSL 5 BASIC4.83□□□□□ -1.64
Trim58Q5NCC9 Gm43651-201ENSMUST00000199796 439 ntBASIC4.83□□□□□ -1.64
Trim58Q5NCC9 Gm43645-201ENSMUST00000200129 341 ntTSL 2 BASIC4.83□□□□□ -1.64
Trim58Q5NCC9 Gm45533-201ENSMUST00000210295 165 ntTSL 5 BASIC4.83□□□□□ -1.64
Trim58Q5NCC9 Olfr928-ps1-201ENSMUST00000213313 237 ntBASIC4.83□□□□□ -1.64
Trim58Q5NCC9 CT025680.1-201ENSMUST00000217375 375 ntBASIC4.83□□□□□ -1.64
Trim58Q5NCC9 Gm10115-201ENSMUST00000076071 1228 ntBASIC4.83□□□□□ -1.64
Trim58Q5NCC9 Vmn1r74-202ENSMUST00000228471 6608 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Trim58Q5NCC9 AC153969.1-201ENSMUST00000214047 2605 ntBASIC4.83□□□□□ -1.64
Trim58Q5NCC9 Olfr816-202ENSMUST00000213438 3306 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Trim58Q5NCC9 Olfr1404-203ENSMUST00000217374 3686 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Trim58Q5NCC9 Gm8744-201ENSMUST00000204475 3581 ntBASIC4.83□□□□□ -1.64
Trim58Q5NCC9 Calcrl-202ENSMUST00000099944 3973 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Trim58Q5NCC9 Cwf19l2-201ENSMUST00000027027 4446 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Trim58Q5NCC9 Gm44525-201ENSMUST00000183129 2634 ntBASIC4.82□□□□□ -1.64
Trim58Q5NCC9 Fgd4-206ENSMUST00000161861 8342 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Trim58Q5NCC9 Gm38073-201ENSMUST00000195141 3665 ntBASIC4.82□□□□□ -1.64
Trim58Q5NCC9 Gm37789-201ENSMUST00000192862 2889 ntBASIC4.82□□□□□ -1.64
Trim58Q5NCC9 Cd200r3-209ENSMUST00000166731 3876 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
Trim58Q5NCC9 Olfr330-202ENSMUST00000213188 2836 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
Trim58Q5NCC9 Defb5-201ENSMUST00000110763 207 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Trim58Q5NCC9 Gm5943-201ENSMUST00000119458 459 ntBASIC4.82□□□□□ -1.64
Trim58Q5NCC9 Gm13788-201ENSMUST00000120767 601 ntBASIC4.82□□□□□ -1.64
Trim58Q5NCC9 Gm15885-201ENSMUST00000122114 388 ntBASIC4.82□□□□□ -1.64
Trim58Q5NCC9 Gm22613-201ENSMUST00000122679 292 ntBASIC4.82□□□□□ -1.64
Trim58Q5NCC9 Gm14095-201ENSMUST00000134264 516 ntTSL 3 BASIC4.82□□□□□ -1.64
Trim58Q5NCC9 Gm14102-201ENSMUST00000147678 464 ntTSL 2 BASIC4.82□□□□□ -1.64
Trim58Q5NCC9 Gm6650-201ENSMUST00000166710 614 ntBASIC4.82□□□□□ -1.64
Trim58Q5NCC9 Olfr762-ps1-201ENSMUST00000172948 927 ntBASIC4.82□□□□□ -1.64
Trim58Q5NCC9 Gm25999-201ENSMUST00000175398 133 ntBASIC4.82□□□□□ -1.64
Trim58Q5NCC9 Snhg5-202ENSMUST00000182232 781 ntTSL 2 BASIC4.82□□□□□ -1.64
Trim58Q5NCC9 Gm43825-201ENSMUST00000199650 734 ntBASIC4.82□□□□□ -1.64
Trim58Q5NCC9 Gm6240-201ENSMUST00000208014 473 ntBASIC4.82□□□□□ -1.64
Trim58Q5NCC9 Gm44993-201ENSMUST00000208435 842 ntTSL 3 BASIC4.82□□□□□ -1.64
Trim58Q5NCC9 AC138401.2-201ENSMUST00000220461 365 ntBASIC4.82□□□□□ -1.64
Trim58Q5NCC9 Gm3829-201ENSMUST00000222362 619 ntBASIC4.82□□□□□ -1.64
Trim58Q5NCC9 Gm5548-201ENSMUST00000055878 397 ntBASIC4.82□□□□□ -1.64
Trim58Q5NCC9 Olfr1369-ps1-201ENSMUST00000079050 954 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Trim58Q5NCC9 Olfr1180-201ENSMUST00000099824 1063 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Trim58Q5NCC9 Olfr665-203ENSMUST00000216257 2298 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Trim58Q5NCC9 Olfr887-202ENSMUST00000212502 6281 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Trim58Q5NCC9 4921501E09Rik-201ENSMUST00000024121 3916 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Trim58Q5NCC9 Olfr1484-204ENSMUST00000216014 3842 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
Trim58Q5NCC9 Zfp458-201ENSMUST00000045969 3488 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Trim58Q5NCC9 Dock11-202ENSMUST00000115264 1725 ntTSL 5 BASIC4.81□□□□□ -1.64
Trim58Q5NCC9 Gm12105-201ENSMUST00000120846 779 ntBASIC4.81□□□□□ -1.64
Trim58Q5NCC9 Gm13366-201ENSMUST00000122198 970 ntBASIC4.81□□□□□ -1.64
Trim58Q5NCC9 Rhoay-ps3-201ENSMUST00000187648 576 ntBASIC4.81□□□□□ -1.64
Trim58Q5NCC9 Gm28974-201ENSMUST00000187893 231 ntBASIC4.81□□□□□ -1.64
Trim58Q5NCC9 1700027A15Rik-203ENSMUST00000188793 423 ntTSL 3 BASIC4.81□□□□□ -1.64
Trim58Q5NCC9 AV026068-210ENSMUST00000189169 877 ntTSL 5 BASIC4.81□□□□□ -1.64
Trim58Q5NCC9 Gm17777-201ENSMUST00000189740 1276 ntBASIC4.81□□□□□ -1.64
Trim58Q5NCC9 Gm29443-202ENSMUST00000190297 410 ntTSL 3 BASIC4.81□□□□□ -1.64
Trim58Q5NCC9 4930440C22Rik-202ENSMUST00000190754 512 ntTSL 3 BASIC4.81□□□□□ -1.64
Trim58Q5NCC9 Gm37401-201ENSMUST00000192053 347 ntTSL 5 BASIC4.81□□□□□ -1.64
Trim58Q5NCC9 Gm37005-201ENSMUST00000193281 1164 ntBASIC4.81□□□□□ -1.64
Trim58Q5NCC9 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC4.81□□□□□ -1.64
Trim58Q5NCC9 1700040K01Rik-201ENSMUST00000195145 438 ntBASIC4.81□□□□□ -1.64
Trim58Q5NCC9 Gm44849-201ENSMUST00000207595 484 ntBASIC4.81□□□□□ -1.64
Trim58Q5NCC9 Gm18672-201ENSMUST00000208035 270 ntBASIC4.81□□□□□ -1.64
Trim58Q5NCC9 CT010506.3-201ENSMUST00000223699 410 ntBASIC4.81□□□□□ -1.64
Trim58Q5NCC9 AC137961.1-201ENSMUST00000227924 734 ntBASIC4.81□□□□□ -1.64
Trim58Q5NCC9 Prl2a1-201ENSMUST00000023602 884 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Trim58Q5NCC9 Gm22005-201ENSMUST00000082795 141 ntBASIC4.81□□□□□ -1.64
Trim58Q5NCC9 Olfr1000-201ENSMUST00000099921 945 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Trim58Q5NCC9 Gm43508-201ENSMUST00000197251 3783 ntBASIC4.81□□□□□ -1.64
Trim58Q5NCC9 Gm37124-201ENSMUST00000192140 1992 ntBASIC4.81□□□□□ -1.64
Trim58Q5NCC9 Ddx60-201ENSMUST00000070631 6535 ntAPPRIS P2 TSL 5 BASIC4.81□□□□□ -1.64
Trim58Q5NCC9 4931408C20Rik-201ENSMUST00000097801 4318 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Trim58Q5NCC9 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Trim58Q5NCC9 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
Trim58Q5NCC9 Vmn1r215-202ENSMUST00000228092 2790 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Trim58Q5NCC9 Gm13307-201ENSMUST00000141375 493 ntTSL 5 BASIC4.8□□□□□ -1.64
Trim58Q5NCC9 Gm12278-201ENSMUST00000153718 407 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Trim58Q5NCC9 Gm25436-201ENSMUST00000158275 145 ntBASIC4.8□□□□□ -1.64
Trim58Q5NCC9 Mir1946a-201ENSMUST00000158360 134 ntBASIC4.8□□□□□ -1.64
Trim58Q5NCC9 4930558K02Rik-202ENSMUST00000162676 983 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
Trim58Q5NCC9 Gm18560-201ENSMUST00000173463 1123 ntBASIC4.8□□□□□ -1.64
Trim58Q5NCC9 Gm22120-201ENSMUST00000175590 70 ntBASIC4.8□□□□□ -1.64
Trim58Q5NCC9 Gm3259-205ENSMUST00000185432 1077 ntTSL 3 BASIC4.8□□□□□ -1.64
Trim58Q5NCC9 Gm29356-201ENSMUST00000186935 373 ntBASIC4.8□□□□□ -1.64
Trim58Q5NCC9 Gm28267-201ENSMUST00000191093 265 ntBASIC4.8□□□□□ -1.64
Trim58Q5NCC9 Tshb-206ENSMUST00000200041 537 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Trim58Q5NCC9 Gng12-208ENSMUST00000204511 739 ntTSL 5 BASIC4.8□□□□□ -1.64
Trim58Q5NCC9 Gm44887-201ENSMUST00000208980 178 ntBASIC4.8□□□□□ -1.64
Trim58Q5NCC9 AC122305.3-201ENSMUST00000214762 361 ntTSL 3 BASIC4.8□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 72.1 ms