Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Obox4-ps19-201ENSMUST00000178284 1140 ntBASIC3.97□□□□□ -1.77
Trim40Q3UWA4 Gm2056-201ENSMUST00000178852 435 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Trim40Q3UWA4 Obox4-ps20-201ENSMUST00000179591 1140 ntBASIC3.97□□□□□ -1.77
Trim40Q3UWA4 Obox4-ps21-201ENSMUST00000179856 1140 ntBASIC3.97□□□□□ -1.77
Trim40Q3UWA4 Gm9947-202ENSMUST00000187401 687 ntTSL 5 BASIC3.97□□□□□ -1.77
Trim40Q3UWA4 Gm29138-201ENSMUST00000191444 348 ntBASIC3.97□□□□□ -1.77
Trim40Q3UWA4 Gm36964-201ENSMUST00000191876 198 ntBASIC3.97□□□□□ -1.77
Trim40Q3UWA4 Gm38045-201ENSMUST00000193536 199 ntTSL 5 BASIC3.97□□□□□ -1.77
Trim40Q3UWA4 Gm43020-201ENSMUST00000197178 372 ntTSL 3 BASIC3.97□□□□□ -1.77
Trim40Q3UWA4 Gm42999-201ENSMUST00000198049 786 ntBASIC3.97□□□□□ -1.77
Trim40Q3UWA4 Gm43698-202ENSMUST00000202864 555 ntTSL 3 BASIC3.97□□□□□ -1.77
Trim40Q3UWA4 Olfr892-ps1-201ENSMUST00000211998 932 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Trim40Q3UWA4 AC121986.1-201ENSMUST00000218588 781 ntBASIC3.97□□□□□ -1.77
Trim40Q3UWA4 Gm4263-202ENSMUST00000221392 667 ntBASIC3.97□□□□□ -1.77
Trim40Q3UWA4 AC147256.1-201ENSMUST00000221589 626 ntTSL 3 BASIC3.97□□□□□ -1.77
Trim40Q3UWA4 Olfr655-201ENSMUST00000057385 927 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Trim40Q3UWA4 Olfr693-201ENSMUST00000057817 952 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Trim40Q3UWA4 Vmn1r6-201ENSMUST00000079669 1058 ntAPPRIS P2 BASIC3.97□□□□□ -1.77
Trim40Q3UWA4 Gm23975-201ENSMUST00000082685 106 ntBASIC3.97□□□□□ -1.77
Trim40Q3UWA4 Psg25-201ENSMUST00000094795 3109 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Trim40Q3UWA4 Vmn1r215-202ENSMUST00000228092 2790 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Trim40Q3UWA4 Vmn1r10-202ENSMUST00000228270 2084 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Trim40Q3UWA4 4930532I03Rik-201ENSMUST00000218463 1724 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Trim40Q3UWA4 Olfr270-203ENSMUST00000215010 2502 ntAPPRIS ALT1 TSL 5 BASIC3.97□□□□□ -1.77
Trim40Q3UWA4 Pde1a-205ENSMUST00000102654 4122 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Trim40Q3UWA4 Gm44668-201ENSMUST00000207911 3265 ntBASIC3.97□□□□□ -1.77
Trim40Q3UWA4 Synpr-207ENSMUST00000223583 3362 ntBASIC3.97□□□□□ -1.77
Trim40Q3UWA4 Nap1l1-202ENSMUST00000171797 3926 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Trim40Q3UWA4 Nap1l1-204ENSMUST00000218828 3934 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Trim40Q3UWA4 Gm26814-201ENSMUST00000181178 4149 ntBASIC3.97□□□□□ -1.77
Trim40Q3UWA4 Gm37323-201ENSMUST00000195771 2773 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Trim40Q3UWA4 Olfr358-202ENSMUST00000216437 4962 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.77
Trim40Q3UWA4 Gm5724-201ENSMUST00000148411 2449 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.77
Trim40Q3UWA4 Gm21033-201ENSMUST00000208590 2608 ntBASIC3.96□□□□□ -1.77
Trim40Q3UWA4 Gm9343-201ENSMUST00000209016 2609 ntBASIC3.96□□□□□ -1.77
Trim40Q3UWA4 Erbb4-201ENSMUST00000119142 11782 ntAPPRIS ALT1 TSL 5 BASIC3.96□□□□□ -1.78
Trim40Q3UWA4 Olfr1242-202ENSMUST00000111540 2189 ntAPPRIS P1 TSL 3 BASIC3.96□□□□□ -1.78
Trim40Q3UWA4 AC153522.2-201ENSMUST00000218389 3853 ntBASIC3.96□□□□□ -1.78
Trim40Q3UWA4 Mcmdc2-204ENSMUST00000140948 3249 ntTSL 5 BASIC3.96□□□□□ -1.78
Trim40Q3UWA4 Vmn2r76-201ENSMUST00000165771 2562 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Trim40Q3UWA4 Gm24578-201ENSMUST00000103970 129 ntBASIC3.96□□□□□ -1.78
Trim40Q3UWA4 Gm23594-201ENSMUST00000104307 134 ntBASIC3.96□□□□□ -1.78
Trim40Q3UWA4 Xlr5d-ps-201ENSMUST00000117501 782 ntBASIC3.96□□□□□ -1.78
Trim40Q3UWA4 Gm14605-201ENSMUST00000120599 268 ntBASIC3.96□□□□□ -1.78
Trim40Q3UWA4 Gm14908-201ENSMUST00000120930 1286 ntBASIC3.96□□□□□ -1.78
Trim40Q3UWA4 Gm11894-201ENSMUST00000121579 328 ntBASIC3.96□□□□□ -1.78
Trim40Q3UWA4 Gm11575-201ENSMUST00000122243 228 ntBASIC3.96□□□□□ -1.78
Trim40Q3UWA4 Gm13868-201ENSMUST00000122411 294 ntBASIC3.96□□□□□ -1.78
Trim40Q3UWA4 Platr32-201ENSMUST00000148597 394 ntTSL 5 BASIC3.96□□□□□ -1.78
Trim40Q3UWA4 Sox5os5-201ENSMUST00000152192 207 ntTSL 3 BASIC3.96□□□□□ -1.78
Trim40Q3UWA4 Gm22870-201ENSMUST00000157501 112 ntBASIC3.96□□□□□ -1.78
Trim40Q3UWA4 Gm17732-201ENSMUST00000163259 821 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Trim40Q3UWA4 Gm6486-201ENSMUST00000166202 434 ntBASIC3.96□□□□□ -1.78
Trim40Q3UWA4 Gm17657-201ENSMUST00000168877 510 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Trim40Q3UWA4 Vmn2r-ps74-201ENSMUST00000174705 917 ntBASIC3.96□□□□□ -1.78
Trim40Q3UWA4 Vmn1r-ps145-201ENSMUST00000175863 424 ntBASIC3.96□□□□□ -1.78
Trim40Q3UWA4 Gm38280-201ENSMUST00000192610 158 ntBASIC3.96□□□□□ -1.78
Trim40Q3UWA4 Gm37050-201ENSMUST00000193464 466 ntBASIC3.96□□□□□ -1.78
Trim40Q3UWA4 2900037B21Rik-201ENSMUST00000194352 337 ntBASIC3.96□□□□□ -1.78
Trim40Q3UWA4 Gm2053-201ENSMUST00000195671 631 ntBASIC3.96□□□□□ -1.78
Trim40Q3UWA4 Rpl18a-ps2-201ENSMUST00000197158 174 ntBASIC3.96□□□□□ -1.78
Trim40Q3UWA4 Igkv12-66-201ENSMUST00000199305 348 ntBASIC3.96□□□□□ -1.78
Trim40Q3UWA4 Gm17956-201ENSMUST00000199931 838 ntBASIC3.96□□□□□ -1.78
Trim40Q3UWA4 Gm44773-201ENSMUST00000207374 557 ntBASIC3.96□□□□□ -1.78
Trim40Q3UWA4 Gm6303-201ENSMUST00000210123 471 ntBASIC3.96□□□□□ -1.78
Trim40Q3UWA4 Olfr540-ps1-201ENSMUST00000210499 612 ntBASIC3.96□□□□□ -1.78
Trim40Q3UWA4 Gm6145-205ENSMUST00000211114 1148 ntTSL 5 BASIC3.96□□□□□ -1.78
Trim40Q3UWA4 Olfr528-ps1-201ENSMUST00000211655 728 ntBASIC3.96□□□□□ -1.78
Trim40Q3UWA4 Rpl18a-205ENSMUST00000212494 473 ntTSL 5 BASIC3.96□□□□□ -1.78
Trim40Q3UWA4 Gm7639-201ENSMUST00000212608 484 ntBASIC3.96□□□□□ -1.78
Trim40Q3UWA4 AC160134.1-201ENSMUST00000213450 551 ntBASIC3.96□□□□□ -1.78
Trim40Q3UWA4 AC139638.1-201ENSMUST00000218027 364 ntBASIC3.96□□□□□ -1.78
Trim40Q3UWA4 AC153932.1-201ENSMUST00000218558 787 ntBASIC3.96□□□□□ -1.78
Trim40Q3UWA4 Gm32443-202ENSMUST00000220011 773 ntTSL 5 BASIC3.96□□□□□ -1.78
Trim40Q3UWA4 Eif1-ps2-201ENSMUST00000221990 339 ntBASIC3.96□□□□□ -1.78
Trim40Q3UWA4 AC154709.1-201ENSMUST00000222304 446 ntTSL 3 BASIC3.96□□□□□ -1.78
Trim40Q3UWA4 Gm18441-201ENSMUST00000223539 617 ntBASIC3.96□□□□□ -1.78
Trim40Q3UWA4 AC107663.3-201ENSMUST00000225873 601 ntBASIC3.96□□□□□ -1.78
Trim40Q3UWA4 Olfr347-201ENSMUST00000078761 943 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Trim40Q3UWA4 Gm22220-201ENSMUST00000082671 149 ntBASIC3.96□□□□□ -1.78
Trim40Q3UWA4 Mir350-201ENSMUST00000083639 99 ntBASIC3.96□□□□□ -1.78
Trim40Q3UWA4 Gm26176-201ENSMUST00000083795 105 ntBASIC3.96□□□□□ -1.78
Trim40Q3UWA4 Gm10491-201ENSMUST00000085330 117 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Trim40Q3UWA4 1700010D01Rik-201ENSMUST00000096366 507 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Trim40Q3UWA4 Ccdc144b-201ENSMUST00000166644 1685 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Trim40Q3UWA4 Gm9732-202ENSMUST00000163912 1757 ntAPPRIS P5 TSL 5 BASIC3.96□□□□□ -1.78
Trim40Q3UWA4 Gm5798-201ENSMUST00000164613 1751 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Trim40Q3UWA4 1700049E17Rik1-201ENSMUST00000095985 1761 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
Trim40Q3UWA4 AC101945.4-201ENSMUST00000228464 1976 ntBASIC3.96□□□□□ -1.78
Trim40Q3UWA4 Eda2r-201ENSMUST00000037353 4752 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Trim40Q3UWA4 Olfr101-203ENSMUST00000215392 2899 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Trim40Q3UWA4 2700099C18Rik-204ENSMUST00000183133 1333 ntBASIC3.95□□□□□ -1.78
Trim40Q3UWA4 Akr1c20-201ENSMUST00000078239 1317 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Trim40Q3UWA4 4930402F11Rik-204ENSMUST00000208612 1405 ntTSL 5 BASIC3.95□□□□□ -1.78
Trim40Q3UWA4 Igip-201ENSMUST00000210490 1417 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Trim40Q3UWA4 Olfr1305-202ENSMUST00000213405 1815 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Trim40Q3UWA4 9430025C20Rik-201ENSMUST00000068663 2115 ntBASIC3.95□□□□□ -1.78
Trim40Q3UWA4 Olfr353-203ENSMUST00000217215 4173 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Trim40Q3UWA4 Gnrhr-203ENSMUST00000113372 2265 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Trim40Q3UWA4 Ddx60-201ENSMUST00000070631 6535 ntAPPRIS P2 TSL 5 BASIC3.95□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 74.7 ms