Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Gm24217-201ENSMUST00000158260 133 ntBASIC4.32□□□□□ -1.72
Brf2Q3UAW9 1700129C05Rik-204ENSMUST00000162674 566 ntAPPRIS ALT2 TSL 3 BASIC4.32□□□□□ -1.72
Brf2Q3UAW9 Vmn1r163-201ENSMUST00000164537 924 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Brf2Q3UAW9 Vmn1r135-201ENSMUST00000170931 924 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Brf2Q3UAW9 Vmn1r148-201ENSMUST00000177774 924 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Brf2Q3UAW9 Vmn1r100-201ENSMUST00000177815 924 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Brf2Q3UAW9 Gm21858-201ENSMUST00000177834 498 ntTSL 5 BASIC4.32□□□□□ -1.72
Brf2Q3UAW9 2310031A07Rik-201ENSMUST00000181212 990 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Brf2Q3UAW9 4930519F16Rik-206ENSMUST00000183292 800 ntBASIC4.32□□□□□ -1.72
Brf2Q3UAW9 Gm29668-201ENSMUST00000187802 315 ntBASIC4.32□□□□□ -1.72
Brf2Q3UAW9 Gm37026-201ENSMUST00000191917 535 ntTSL 5 BASIC4.32□□□□□ -1.72
Brf2Q3UAW9 Gm37501-201ENSMUST00000192830 691 ntBASIC4.32□□□□□ -1.72
Brf2Q3UAW9 1700063I16Rik-201ENSMUST00000194611 611 ntBASIC4.32□□□□□ -1.72
Brf2Q3UAW9 Gm38039-201ENSMUST00000195328 443 ntTSL 5 BASIC4.32□□□□□ -1.72
Brf2Q3UAW9 Gm43828-201ENSMUST00000196890 639 ntBASIC4.32□□□□□ -1.72
Brf2Q3UAW9 Mir1892-201ENSMUST00000197752 80 ntBASIC4.32□□□□□ -1.72
Brf2Q3UAW9 Gm43018-201ENSMUST00000198075 1275 ntBASIC4.32□□□□□ -1.72
Brf2Q3UAW9 Gm43144-201ENSMUST00000198256 485 ntBASIC4.32□□□□□ -1.72
Brf2Q3UAW9 Gm18327-201ENSMUST00000202426 830 ntBASIC4.32□□□□□ -1.72
Brf2Q3UAW9 Olfr187-201ENSMUST00000206428 978 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Brf2Q3UAW9 Rpl18a-205ENSMUST00000212494 473 ntTSL 5 BASIC4.32□□□□□ -1.72
Brf2Q3UAW9 1700054O05Rik-201ENSMUST00000214107 555 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Brf2Q3UAW9 Gm39302-201ENSMUST00000215184 636 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Brf2Q3UAW9 AC156832.3-201ENSMUST00000215591 435 ntBASIC4.32□□□□□ -1.72
Brf2Q3UAW9 Gm30239-202ENSMUST00000223193 631 ntTSL 5 BASIC4.32□□□□□ -1.72
Brf2Q3UAW9 AC090496.1-201ENSMUST00000226020 260 ntBASIC4.32□□□□□ -1.72
Brf2Q3UAW9 AC113031.2-201ENSMUST00000226132 579 ntBASIC4.32□□□□□ -1.72
Brf2Q3UAW9 CT573086.3-201ENSMUST00000228762 594 ntBASIC4.32□□□□□ -1.72
Brf2Q3UAW9 Tsx-201ENSMUST00000033691 812 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Brf2Q3UAW9 Spinkl-201ENSMUST00000066328 593 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Brf2Q3UAW9 Gmfg-201ENSMUST00000078845 637 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Brf2Q3UAW9 Mir30b-201ENSMUST00000083542 96 ntBASIC4.32□□□□□ -1.72
Brf2Q3UAW9 Gm24254-201ENSMUST00000083702 104 ntBASIC4.32□□□□□ -1.72
Brf2Q3UAW9 Gm24031-201ENSMUST00000083930 131 ntBASIC4.32□□□□□ -1.72
Brf2Q3UAW9 Vmn2r125-201ENSMUST00000096794 1110 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Brf2Q3UAW9 Nfyc-202ENSMUST00000097906 1008 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Brf2Q3UAW9 Vmn1r125-201ENSMUST00000098739 924 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Brf2Q3UAW9 Olfr1216-201ENSMUST00000099800 936 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Brf2Q3UAW9 Olfr1049-201ENSMUST00000099899 953 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Brf2Q3UAW9 Klri2-201ENSMUST00000050385 3913 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Brf2Q3UAW9 Olfr715b-202ENSMUST00000215713 3879 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Brf2Q3UAW9 Kbtbd8-202ENSMUST00000119582 4518 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Brf2Q3UAW9 Olfr556-202ENSMUST00000213485 3825 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Brf2Q3UAW9 Ankrd31-201ENSMUST00000207464 5146 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Brf2Q3UAW9 Slfn10-ps-201ENSMUST00000100716 3621 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Brf2Q3UAW9 Mbnl1-219ENSMUST00000194201 4319 ntTSL 5 BASIC4.31□□□□□ -1.72
Brf2Q3UAW9 Vmn2r21-201ENSMUST00000163607 2562 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Brf2Q3UAW9 Vmn2r20-201ENSMUST00000172199 2562 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Brf2Q3UAW9 Dnah7a-201ENSMUST00000094964 12245 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Brf2Q3UAW9 AC164297.4-201ENSMUST00000224225 1307 ntBASIC4.31□□□□□ -1.72
Brf2Q3UAW9 Gm37397-201ENSMUST00000194579 2842 ntBASIC4.31□□□□□ -1.72
Brf2Q3UAW9 Gm4342-201ENSMUST00000118982 367 ntBASIC4.31□□□□□ -1.72
Brf2Q3UAW9 Gm12186-201ENSMUST00000119050 945 ntBASIC4.31□□□□□ -1.72
Brf2Q3UAW9 Gm11252-201ENSMUST00000120572 939 ntBASIC4.31□□□□□ -1.72
Brf2Q3UAW9 2610024D14Rik-201ENSMUST00000121233 294 ntBASIC4.31□□□□□ -1.72
Brf2Q3UAW9 Vmn1r-ps3-201ENSMUST00000122439 917 ntBASIC4.31□□□□□ -1.72
Brf2Q3UAW9 A630023P12Rik-204ENSMUST00000142879 524 ntTSL 3 BASIC4.31□□□□□ -1.72
Brf2Q3UAW9 Gm11998-201ENSMUST00000146304 972 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Brf2Q3UAW9 1700129C05Rik-203ENSMUST00000162271 325 ntAPPRIS ALT2 TSL 3 BASIC4.31□□□□□ -1.72
Brf2Q3UAW9 4933440J02Rik-201ENSMUST00000181547 1144 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Brf2Q3UAW9 Mir7022-201ENSMUST00000183749 61 ntBASIC4.31□□□□□ -1.72
Brf2Q3UAW9 Gm4707-202ENSMUST00000183937 276 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Brf2Q3UAW9 Gm28503-201ENSMUST00000185966 147 ntBASIC4.31□□□□□ -1.72
Brf2Q3UAW9 Scgb2b31-ps-201ENSMUST00000188734 328 ntBASIC4.31□□□□□ -1.72
Brf2Q3UAW9 Scgb2b32-ps-201ENSMUST00000190326 337 ntBASIC4.31□□□□□ -1.72
Brf2Q3UAW9 Gm44474-201ENSMUST00000196525 127 ntBASIC4.31□□□□□ -1.72
Brf2Q3UAW9 Gm43619-201ENSMUST00000197267 914 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Brf2Q3UAW9 1700013M08Rik-201ENSMUST00000197709 683 ntTSL 3 BASIC4.31□□□□□ -1.72
Brf2Q3UAW9 Gm43675-201ENSMUST00000199468 1184 ntBASIC4.31□□□□□ -1.72
Brf2Q3UAW9 Gm43309-201ENSMUST00000200837 458 ntBASIC4.31□□□□□ -1.72
Brf2Q3UAW9 Gm43786-201ENSMUST00000201722 524 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Brf2Q3UAW9 Ankrd42-207ENSMUST00000207131 1220 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Brf2Q3UAW9 4930405G09Rik-201ENSMUST00000207912 1060 ntBASIC4.31□□□□□ -1.72
Brf2Q3UAW9 4930503L19Rik-202ENSMUST00000211817 913 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Brf2Q3UAW9 Gm45702-201ENSMUST00000211856 644 ntTSL 2 BASIC4.31□□□□□ -1.72
Brf2Q3UAW9 AC127581.1-201ENSMUST00000214084 771 ntTSL 5 BASIC4.31□□□□□ -1.72
Brf2Q3UAW9 AC127302.1-201ENSMUST00000215973 1111 ntBASIC4.31□□□□□ -1.72
Brf2Q3UAW9 Gm5917-201ENSMUST00000217638 721 ntBASIC4.31□□□□□ -1.72
Brf2Q3UAW9 Olfr603-202ENSMUST00000218246 1021 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Brf2Q3UAW9 Gm4052-201ENSMUST00000220890 451 ntBASIC4.31□□□□□ -1.72
Brf2Q3UAW9 Gm19134-201ENSMUST00000221203 487 ntBASIC4.31□□□□□ -1.72
Brf2Q3UAW9 AC132344.1-201ENSMUST00000221289 376 ntTSL 3 BASIC4.31□□□□□ -1.72
Brf2Q3UAW9 AC125539.1-202ENSMUST00000226449 670 ntBASIC4.31□□□□□ -1.72
Brf2Q3UAW9 Olfr1463-201ENSMUST00000064102 933 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Brf2Q3UAW9 Olfr194-201ENSMUST00000072608 921 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Brf2Q3UAW9 Olfr715b-201ENSMUST00000081044 948 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Brf2Q3UAW9 Gm22220-201ENSMUST00000082671 149 ntBASIC4.31□□□□□ -1.72
Brf2Q3UAW9 Themis-202ENSMUST00000060409 2278 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
Brf2Q3UAW9 4921515E04Rik-202ENSMUST00000226383 1738 ntBASIC4.31□□□□□ -1.72
Brf2Q3UAW9 Cd53-201ENSMUST00000038845 1742 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Brf2Q3UAW9 Olfr1317-203ENSMUST00000214801 2578 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Brf2Q3UAW9 Vmn1r10-202ENSMUST00000228270 2084 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Brf2Q3UAW9 Vmn1r184-202ENSMUST00000227230 7999 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Brf2Q3UAW9 Cpxcr1-201ENSMUST00000101269 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Brf2Q3UAW9 Mid2-203ENSMUST00000112993 5916 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Brf2Q3UAW9 Vmn1r39-207ENSMUST00000228862 2398 ntAPPRIS P2 BASIC4.31□□□□□ -1.72
Brf2Q3UAW9 Ank2-208ENSMUST00000182078 14305 ntAPPRIS P2 TSL 5 BASIC4.31□□□□□ -1.72
Brf2Q3UAW9 Macf1-201ENSMUST00000082108 17331 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Brf2Q3UAW9 Gm42927-201ENSMUST00000200624 3841 ntBASIC4.3□□□□□ -1.72
Brf2Q3UAW9 Gm10256-201ENSMUST00000179404 1358 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 79 ms