Protein–RNA interactions for Protein: Q3TP92

Ctdnep1, CTD nuclear envelope phosphatase 1, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1Q3TP92 Gm32647-201ENSMUST00000206116 3288 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Ctdnep1Q3TP92 Olfr1012-203ENSMUST00000214958 3076 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
Ctdnep1Q3TP92 Gm15613-201ENSMUST00000118396 326 ntBASIC4.27□□□□□ -1.73
Ctdnep1Q3TP92 Gm11869-201ENSMUST00000118701 329 ntBASIC4.27□□□□□ -1.73
Ctdnep1Q3TP92 Gm12873-201ENSMUST00000119988 422 ntBASIC4.27□□□□□ -1.73
Ctdnep1Q3TP92 Gm15263-201ENSMUST00000121556 642 ntBASIC4.27□□□□□ -1.73
Ctdnep1Q3TP92 Spin2-ps4-201ENSMUST00000126395 762 ntBASIC4.27□□□□□ -1.73
Ctdnep1Q3TP92 4930556G01Rik-201ENSMUST00000128925 891 ntTSL 5 BASIC4.27□□□□□ -1.73
Ctdnep1Q3TP92 4930412F09Rik-201ENSMUST00000139006 1017 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Ctdnep1Q3TP92 Spin2-ps3-201ENSMUST00000148147 762 ntBASIC4.27□□□□□ -1.73
Ctdnep1Q3TP92 Gm13985-201ENSMUST00000154409 621 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Ctdnep1Q3TP92 Gm23958-201ENSMUST00000157207 105 ntBASIC4.27□□□□□ -1.73
Ctdnep1Q3TP92 Gm25456-201ENSMUST00000157952 109 ntBASIC4.27□□□□□ -1.73
Ctdnep1Q3TP92 Gm22890-201ENSMUST00000158642 144 ntBASIC4.27□□□□□ -1.73
Ctdnep1Q3TP92 Gm26362-201ENSMUST00000158865 315 ntBASIC4.27□□□□□ -1.73
Ctdnep1Q3TP92 Gm8247-202ENSMUST00000178759 375 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
Ctdnep1Q3TP92 Gm28967-201ENSMUST00000187351 281 ntBASIC4.27□□□□□ -1.73
Ctdnep1Q3TP92 Gm37571-201ENSMUST00000195048 614 ntTSL 3 BASIC4.27□□□□□ -1.73
Ctdnep1Q3TP92 Gm37791-201ENSMUST00000195081 286 ntBASIC4.27□□□□□ -1.73
Ctdnep1Q3TP92 Gm42926-201ENSMUST00000200496 697 ntBASIC4.27□□□□□ -1.73
Ctdnep1Q3TP92 Gm43892-201ENSMUST00000204373 265 ntBASIC4.27□□□□□ -1.73
Ctdnep1Q3TP92 Gm44559-201ENSMUST00000207177 1012 ntBASIC4.27□□□□□ -1.73
Ctdnep1Q3TP92 Gm45269-201ENSMUST00000210359 282 ntBASIC4.27□□□□□ -1.73
Ctdnep1Q3TP92 Olfr337-ps1-202ENSMUST00000213375 526 ntBASIC4.27□□□□□ -1.73
Ctdnep1Q3TP92 AC156504.1-201ENSMUST00000214608 157 ntBASIC4.27□□□□□ -1.73
Ctdnep1Q3TP92 2210414F02Rik-201ENSMUST00000215316 396 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Ctdnep1Q3TP92 AC127270.2-201ENSMUST00000221337 247 ntBASIC4.27□□□□□ -1.73
Ctdnep1Q3TP92 AC117202.1-201ENSMUST00000227007 445 ntBASIC4.27□□□□□ -1.73
Ctdnep1Q3TP92 Olfr1197-201ENSMUST00000099815 945 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Ctdnep1Q3TP92 Olfr154-201ENSMUST00000099918 1079 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Ctdnep1Q3TP92 Atrx-202ENSMUST00000113573 10275 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Ctdnep1Q3TP92 Hyal6-201ENSMUST00000031690 3452 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Ctdnep1Q3TP92 Cfap97-206ENSMUST00000164504 4521 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
Ctdnep1Q3TP92 Rab30-201ENSMUST00000032879 9456 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Ctdnep1Q3TP92 Gm37114-201ENSMUST00000195065 1804 ntBASIC4.26□□□□□ -1.73
Ctdnep1Q3TP92 Pkhd1l1-203ENSMUST00000209244 12949 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Ctdnep1Q3TP92 Lztfl1-201ENSMUST00000026274 4070 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Ctdnep1Q3TP92 Trav8n-2-201ENSMUST00000103632 408 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Ctdnep1Q3TP92 Gm11939-201ENSMUST00000104931 300 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Ctdnep1Q3TP92 Cyp4b1-ps2-201ENSMUST00000119563 333 ntBASIC4.26□□□□□ -1.73
Ctdnep1Q3TP92 Gm12379-201ENSMUST00000119607 391 ntBASIC4.26□□□□□ -1.73
Ctdnep1Q3TP92 Gm5924-201ENSMUST00000132554 871 ntBASIC4.26□□□□□ -1.73
Ctdnep1Q3TP92 Mir5112-201ENSMUST00000174897 60 ntBASIC4.26□□□□□ -1.73
Ctdnep1Q3TP92 Gm8356-203ENSMUST00000178896 615 ntTSL 5 BASIC4.26□□□□□ -1.73
Ctdnep1Q3TP92 Gm28010-201ENSMUST00000179485 126 ntBASIC4.26□□□□□ -1.73
Ctdnep1Q3TP92 Gm26944-201ENSMUST00000182265 633 ntTSL 3 BASIC4.26□□□□□ -1.73
Ctdnep1Q3TP92 Mir6899-201ENSMUST00000184798 64 ntBASIC4.26□□□□□ -1.73
Ctdnep1Q3TP92 Mir6943-201ENSMUST00000185186 66 ntBASIC4.26□□□□□ -1.73
Ctdnep1Q3TP92 Gm44176-201ENSMUST00000204336 276 ntTSL 5 BASIC4.26□□□□□ -1.73
Ctdnep1Q3TP92 Gm31717-201ENSMUST00000213044 668 ntTSL 5 BASIC4.26□□□□□ -1.73
Ctdnep1Q3TP92 AC132384.5-201ENSMUST00000218562 226 ntBASIC4.26□□□□□ -1.73
Ctdnep1Q3TP92 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC4.26□□□□□ -1.73
Ctdnep1Q3TP92 AC126033.1-201ENSMUST00000227628 6773 ntBASIC4.26□□□□□ -1.73
Ctdnep1Q3TP92 Mrpl1-203ENSMUST00000121477 1550 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Ctdnep1Q3TP92 Gm13757-201ENSMUST00000126038 4460 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
Ctdnep1Q3TP92 A230057D06Rik-202ENSMUST00000207061 3717 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Ctdnep1Q3TP92 Elavl4-202ENSMUST00000102723 4024 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Ctdnep1Q3TP92 Nlrp9a-204ENSMUST00000122040 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
Ctdnep1Q3TP92 4921501E09Rik-201ENSMUST00000024121 3916 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Ctdnep1Q3TP92 AI987944-202ENSMUST00000205338 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
Ctdnep1Q3TP92 Olfr1270-202ENSMUST00000213946 4930 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Ctdnep1Q3TP92 n-R5s68-201ENSMUST00000122639 82 ntBASIC4.25□□□□□ -1.73
Ctdnep1Q3TP92 Gm14902-201ENSMUST00000145576 1007 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Ctdnep1Q3TP92 Gm23123-201ENSMUST00000157648 144 ntBASIC4.25□□□□□ -1.73
Ctdnep1Q3TP92 Gm24727-201ENSMUST00000158231 144 ntBASIC4.25□□□□□ -1.73
Ctdnep1Q3TP92 Vmn1r-ps55-201ENSMUST00000174634 392 ntBASIC4.25□□□□□ -1.73
Ctdnep1Q3TP92 Obox4-ps29-201ENSMUST00000175956 1134 ntBASIC4.25□□□□□ -1.73
Ctdnep1Q3TP92 Scgb2a2-201ENSMUST00000179814 1107 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Ctdnep1Q3TP92 Mpc1-ps-201ENSMUST00000181662 330 ntBASIC4.25□□□□□ -1.73
Ctdnep1Q3TP92 Gm26983-201ENSMUST00000182051 388 ntBASIC4.25□□□□□ -1.73
Ctdnep1Q3TP92 Mir7676-1-201ENSMUST00000183491 62 ntBASIC4.25□□□□□ -1.73
Ctdnep1Q3TP92 Mir7676-2-201ENSMUST00000183523 62 ntBASIC4.25□□□□□ -1.73
Ctdnep1Q3TP92 Mir6418-201ENSMUST00000185075 115 ntBASIC4.25□□□□□ -1.73
Ctdnep1Q3TP92 2210017I01Rik-201ENSMUST00000195278 822 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Ctdnep1Q3TP92 Gm44376-201ENSMUST00000197570 128 ntBASIC4.25□□□□□ -1.73
Ctdnep1Q3TP92 Gm42824-201ENSMUST00000199361 247 ntBASIC4.25□□□□□ -1.73
Ctdnep1Q3TP92 Gm15927-204ENSMUST00000206075 372 ntTSL 3 BASIC4.25□□□□□ -1.73
Ctdnep1Q3TP92 Gm44869-201ENSMUST00000208836 357 ntBASIC4.25□□□□□ -1.73
Ctdnep1Q3TP92 Gm6929-201ENSMUST00000210930 468 ntBASIC4.25□□□□□ -1.73
Ctdnep1Q3TP92 Gm45789-201ENSMUST00000213038 364 ntBASIC4.25□□□□□ -1.73
Ctdnep1Q3TP92 Gm39348-202ENSMUST00000217239 375 ntTSL 2 BASIC4.25□□□□□ -1.73
Ctdnep1Q3TP92 2410024N13Rik-201ENSMUST00000090704 669 ntBASIC4.25□□□□□ -1.73
Ctdnep1Q3TP92 Ang6-201ENSMUST00000096869 444 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Ctdnep1Q3TP92 Zfp260-202ENSMUST00000108200 3604 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Ctdnep1Q3TP92 Serpinb3c-201ENSMUST00000027565 1659 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Ctdnep1Q3TP92 Gm38207-201ENSMUST00000193009 3505 ntBASIC4.25□□□□□ -1.73
Ctdnep1Q3TP92 Olfr665-204ENSMUST00000216971 3248 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Ctdnep1Q3TP92 Olfr1000-202ENSMUST00000213837 1915 ntAPPRIS P1 TSL 3 BASIC4.25□□□□□ -1.73
Ctdnep1Q3TP92 Olfr907-203ENSMUST00000214264 1910 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Ctdnep1Q3TP92 Gm336-201ENSMUST00000186376 1480 ntBASIC4.24□□□□□ -1.73
Ctdnep1Q3TP92 Ddx60-201ENSMUST00000070631 6535 ntAPPRIS P2 TSL 5 BASIC4.24□□□□□ -1.73
Ctdnep1Q3TP92 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
Ctdnep1Q3TP92 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
Ctdnep1Q3TP92 Gm45264-201ENSMUST00000210090 3995 ntBASIC4.24□□□□□ -1.73
Ctdnep1Q3TP92 Olfr263-202ENSMUST00000215804 3963 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Ctdnep1Q3TP92 AC135119.1-201ENSMUST00000227935 3717 ntBASIC4.24□□□□□ -1.73
Ctdnep1Q3TP92 Mir690-201ENSMUST00000102110 109 ntBASIC4.24□□□□□ -1.73
Ctdnep1Q3TP92 Bsph2-201ENSMUST00000108526 532 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Ctdnep1Q3TP92 Gm13737-201ENSMUST00000119793 232 ntBASIC4.24□□□□□ -1.73
Ctdnep1Q3TP92 Gm12849-201ENSMUST00000120013 739 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 89 ms