Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 A230057D06Rik-202ENSMUST00000207061 3717 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Trim43aQ3TL54 Gm37124-201ENSMUST00000192140 1992 ntBASIC4.22□□□□□ -1.73
Trim43aQ3TL54 Gmnc-201ENSMUST00000089832 4083 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Trim43aQ3TL54 Gm12638-201ENSMUST00000119531 298 ntBASIC4.22□□□□□ -1.73
Trim43aQ3TL54 Vmn1r-ps135-201ENSMUST00000120909 595 ntBASIC4.22□□□□□ -1.73
Trim43aQ3TL54 Gm8244-201ENSMUST00000121254 264 ntBASIC4.22□□□□□ -1.73
Trim43aQ3TL54 Gm15075-201ENSMUST00000122187 477 ntBASIC4.22□□□□□ -1.73
Trim43aQ3TL54 Gm12224-202ENSMUST00000127107 726 ntTSL 3 BASIC4.22□□□□□ -1.73
Trim43aQ3TL54 Gm15534-201ENSMUST00000137642 562 ntBASIC4.22□□□□□ -1.73
Trim43aQ3TL54 Gm12278-201ENSMUST00000153718 407 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Trim43aQ3TL54 2610001J05Rik-202ENSMUST00000155856 1077 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Trim43aQ3TL54 Gm25606-201ENSMUST00000158363 95 ntBASIC4.22□□□□□ -1.73
Trim43aQ3TL54 Clec9a-203ENSMUST00000164513 714 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
Trim43aQ3TL54 Gm21070-201ENSMUST00000182425 985 ntBASIC4.22□□□□□ -1.73
Trim43aQ3TL54 Mir3620-201ENSMUST00000184710 61 ntBASIC4.22□□□□□ -1.73
Trim43aQ3TL54 1700109I08Rik-201ENSMUST00000185680 396 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Trim43aQ3TL54 Gm36964-201ENSMUST00000191876 198 ntBASIC4.22□□□□□ -1.73
Trim43aQ3TL54 Gm8823-201ENSMUST00000193158 433 ntBASIC4.22□□□□□ -1.73
Trim43aQ3TL54 Ighv10-4-201ENSMUST00000193702 299 ntBASIC4.22□□□□□ -1.73
Trim43aQ3TL54 Gm43841-201ENSMUST00000199491 586 ntBASIC4.22□□□□□ -1.73
Trim43aQ3TL54 Gm43651-201ENSMUST00000199796 439 ntBASIC4.22□□□□□ -1.73
Trim43aQ3TL54 Gm38944-201ENSMUST00000208218 512 ntTSL 2 BASIC4.22□□□□□ -1.73
Trim43aQ3TL54 Gm45434-201ENSMUST00000210550 293 ntBASIC4.22□□□□□ -1.73
Trim43aQ3TL54 Calml4-203ENSMUST00000213643 710 ntTSL 2 BASIC4.22□□□□□ -1.73
Trim43aQ3TL54 AC158686.2-201ENSMUST00000218599 976 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Trim43aQ3TL54 AC153917.1-201ENSMUST00000218959 856 ntTSL 5 BASIC4.22□□□□□ -1.73
Trim43aQ3TL54 AC099612.2-201ENSMUST00000226824 721 ntBASIC4.22□□□□□ -1.73
Trim43aQ3TL54 E330017A01Rik-201ENSMUST00000053249 1108 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Trim43aQ3TL54 Snord22-201ENSMUST00000083153 126 ntBASIC4.22□□□□□ -1.73
Trim43aQ3TL54 n-R5s85-201ENSMUST00000083453 113 ntBASIC4.22□□□□□ -1.73
Trim43aQ3TL54 Mir383-201ENSMUST00000083523 70 ntBASIC4.22□□□□□ -1.73
Trim43aQ3TL54 Mir346-201ENSMUST00000083547 98 ntBASIC4.22□□□□□ -1.73
Trim43aQ3TL54 2410024N13Rik-201ENSMUST00000090704 669 ntBASIC4.22□□□□□ -1.73
Trim43aQ3TL54 Jrkl-201ENSMUST00000110582 3223 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Trim43aQ3TL54 Olfr665-202ENSMUST00000215761 2522 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Trim43aQ3TL54 Gm14062-201ENSMUST00000134795 4134 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Trim43aQ3TL54 Gm36229-201ENSMUST00000218737 1855 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Trim43aQ3TL54 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.73
Trim43aQ3TL54 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.73
Trim43aQ3TL54 Ktn1-226ENSMUST00000191511 3962 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.73
Trim43aQ3TL54 Gm37407-201ENSMUST00000194793 1316 ntBASIC4.21□□□□□ -1.73
Trim43aQ3TL54 AC167360.1-201ENSMUST00000222596 2494 ntBASIC4.21□□□□□ -1.73
Trim43aQ3TL54 Gm2042-207ENSMUST00000181326 2440 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
Trim43aQ3TL54 4930467E23Rik-201ENSMUST00000098909 2514 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Trim43aQ3TL54 Gm15148-201ENSMUST00000117602 156 ntBASIC4.21□□□□□ -1.74
Trim43aQ3TL54 Gm13737-201ENSMUST00000119793 232 ntBASIC4.21□□□□□ -1.74
Trim43aQ3TL54 Gm11260-201ENSMUST00000121163 942 ntBASIC4.21□□□□□ -1.74
Trim43aQ3TL54 Gm11216-201ENSMUST00000125240 354 ntTSL 5 BASIC4.21□□□□□ -1.74
Trim43aQ3TL54 Sval2-201ENSMUST00000014248 585 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Trim43aQ3TL54 Rgs2-204ENSMUST00000153527 588 ntTSL 2 BASIC4.21□□□□□ -1.74
Trim43aQ3TL54 Gm11640-201ENSMUST00000155987 272 ntTSL 3 BASIC4.21□□□□□ -1.74
Trim43aQ3TL54 Gm25427-201ENSMUST00000157605 103 ntBASIC4.21□□□□□ -1.74
Trim43aQ3TL54 Gm23215-201ENSMUST00000178153 121 ntBASIC4.21□□□□□ -1.74
Trim43aQ3TL54 Rpl31-ps18-201ENSMUST00000180885 377 ntBASIC4.21□□□□□ -1.74
Trim43aQ3TL54 Scgb2b17-203ENSMUST00000182673 434 ntAPPRIS P2 TSL 2 BASIC4.21□□□□□ -1.74
Trim43aQ3TL54 Scgb2b15-201ENSMUST00000182975 434 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
Trim43aQ3TL54 Mir6715-201ENSMUST00000184990 57 ntBASIC4.21□□□□□ -1.74
Trim43aQ3TL54 Gm29443-202ENSMUST00000190297 410 ntTSL 3 BASIC4.21□□□□□ -1.74
Trim43aQ3TL54 Gm29479-201ENSMUST00000190352 455 ntBASIC4.21□□□□□ -1.74
Trim43aQ3TL54 Gm9722-201ENSMUST00000194568 802 ntBASIC4.21□□□□□ -1.74
Trim43aQ3TL54 Gm37505-201ENSMUST00000195670 461 ntTSL 5 BASIC4.21□□□□□ -1.74
Trim43aQ3TL54 Gm7041-201ENSMUST00000201227 524 ntBASIC4.21□□□□□ -1.74
Trim43aQ3TL54 Gm4045-201ENSMUST00000204076 310 ntBASIC4.21□□□□□ -1.74
Trim43aQ3TL54 Gm45604-201ENSMUST00000209665 550 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Trim43aQ3TL54 CT025680.1-201ENSMUST00000217375 375 ntBASIC4.21□□□□□ -1.74
Trim43aQ3TL54 Gm40884-201ENSMUST00000223505 541 ntTSL 3 BASIC4.21□□□□□ -1.74
Trim43aQ3TL54 AC133517.1-202ENSMUST00000224409 233 ntBASIC4.21□□□□□ -1.74
Trim43aQ3TL54 AC166095.1-203ENSMUST00000224591 233 ntBASIC4.21□□□□□ -1.74
Trim43aQ3TL54 AC154323.3-201ENSMUST00000226927 1660 ntBASIC4.21□□□□□ -1.74
Trim43aQ3TL54 Olfr106-ps-202ENSMUST00000214704 1791 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Trim43aQ3TL54 Olfr642-202ENSMUST00000214299 4715 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Trim43aQ3TL54 Slc9c1-201ENSMUST00000159945 3836 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Trim43aQ3TL54 Gm13084-201ENSMUST00000075045 1805 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
Trim43aQ3TL54 AC142245.1-201ENSMUST00000226611 1505 ntBASIC4.21□□□□□ -1.74
Trim43aQ3TL54 Gm7646-201ENSMUST00000198590 1346 ntBASIC4.21□□□□□ -1.74
Trim43aQ3TL54 Olfr215-201ENSMUST00000061723 4112 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Trim43aQ3TL54 AC126033.1-201ENSMUST00000227628 6773 ntBASIC4.2□□□□□ -1.74
Trim43aQ3TL54 Gm43990-201ENSMUST00000203790 1691 ntBASIC4.2□□□□□ -1.74
Trim43aQ3TL54 Vmn1r36-203ENSMUST00000226728 1458 ntBASIC4.2□□□□□ -1.74
Trim43aQ3TL54 Spata31d1c-201ENSMUST00000099427 3390 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Trim43aQ3TL54 Igkv11-106-201ENSMUST00000103331 346 ntBASIC4.2□□□□□ -1.74
Trim43aQ3TL54 Gm13501-201ENSMUST00000118477 979 ntBASIC4.2□□□□□ -1.74
Trim43aQ3TL54 Gm13314-201ENSMUST00000118742 335 ntBASIC4.2□□□□□ -1.74
Trim43aQ3TL54 Gm5943-201ENSMUST00000119458 459 ntBASIC4.2□□□□□ -1.74
Trim43aQ3TL54 Gm8757-201ENSMUST00000119660 372 ntBASIC4.2□□□□□ -1.74
Trim43aQ3TL54 Gm25177-201ENSMUST00000122634 117 ntBASIC4.2□□□□□ -1.74
Trim43aQ3TL54 Olfr1234-203ENSMUST00000137692 3827 ntAPPRIS P1 TSL 3 BASIC4.2□□□□□ -1.74
Trim43aQ3TL54 Gm12204-201ENSMUST00000147412 333 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Trim43aQ3TL54 Gm16243-201ENSMUST00000160351 494 ntTSL 3 BASIC4.2□□□□□ -1.74
Trim43aQ3TL54 Gm5263-201ENSMUST00000163646 601 ntBASIC4.2□□□□□ -1.74
Trim43aQ3TL54 Gm15099-201ENSMUST00000179833 573 ntTSL 5 BASIC4.2□□□□□ -1.74
Trim43aQ3TL54 Mir6414-201ENSMUST00000183685 82 ntBASIC4.2□□□□□ -1.74
Trim43aQ3TL54 Gm28935-201ENSMUST00000185737 568 ntTSL 2 BASIC4.2□□□□□ -1.74
Trim43aQ3TL54 Gm4644-201ENSMUST00000197587 400 ntBASIC4.2□□□□□ -1.74
Trim43aQ3TL54 Gm8035-201ENSMUST00000204625 687 ntBASIC4.2□□□□□ -1.74
Trim43aQ3TL54 Gm5358-201ENSMUST00000212814 353 ntBASIC4.2□□□□□ -1.74
Trim43aQ3TL54 AC153382.1-201ENSMUST00000217953 1007 ntTSL 5 BASIC4.2□□□□□ -1.74
Trim43aQ3TL54 Gm16381-201ENSMUST00000220528 503 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Trim43aQ3TL54 Gm2001-201ENSMUST00000223236 503 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Trim43aQ3TL54 AC121542.1-201ENSMUST00000227245 721 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms