Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Gm22460-201ENSMUST00000175269 124 ntBASIC2.58□□□□□ -2
PrkdcP97313 Gm24365-201ENSMUST00000175384 125 ntBASIC2.58□□□□□ -2
PrkdcP97313 Gm44310-201ENSMUST00000175424 126 ntBASIC2.58□□□□□ -2
PrkdcP97313 Gm22639-201ENSMUST00000175591 125 ntBASIC2.58□□□□□ -2
PrkdcP97313 Obox4-ps15-201ENSMUST00000178057 1140 ntBASIC2.58□□□□□ -2
PrkdcP97313 Obox4-ps19-201ENSMUST00000178284 1140 ntBASIC2.58□□□□□ -2
PrkdcP97313 Gm24979-201ENSMUST00000178626 126 ntBASIC2.58□□□□□ -2
PrkdcP97313 Obox4-ps20-201ENSMUST00000179591 1140 ntBASIC2.58□□□□□ -2
PrkdcP97313 Obox4-ps21-201ENSMUST00000179856 1140 ntBASIC2.58□□□□□ -2
PrkdcP97313 Mir7669-201ENSMUST00000183442 58 ntBASIC2.58□□□□□ -2
PrkdcP97313 Gm27743-201ENSMUST00000185136 126 ntBASIC2.58□□□□□ -2
PrkdcP97313 Gm36934-201ENSMUST00000192007 306 ntBASIC2.58□□□□□ -2
PrkdcP97313 AC133517.1-203ENSMUST00000225570 390 ntBASIC2.58□□□□□ -2
PrkdcP97313 Tnip3-201ENSMUST00000114236 3769 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
PrkdcP97313 Olfr635-202ENSMUST00000209473 8565 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
PrkdcP97313 Havcr2-201ENSMUST00000020668 2721 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
PrkdcP97313 Zfp951-201ENSMUST00000089906 1356 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
PrkdcP97313 Kcnt2-202ENSMUST00000120709 5790 ntTSL 5 BASIC2.58□□□□□ -2
PrkdcP97313 Gm44676-201ENSMUST00000208520 3055 ntBASIC2.58□□□□□ -2
PrkdcP97313 Chst9-201ENSMUST00000053017 1620 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
PrkdcP97313 Gm24138-201ENSMUST00000157572 114 ntBASIC2.58□□□□□ -2
PrkdcP97313 Pcgf1-204ENSMUST00000176089 492 ntTSL 5 BASIC2.58□□□□□ -2
PrkdcP97313 AC165366.1-201ENSMUST00000225905 505 ntAPPRIS P1 BASIC2.58□□□□□ -2
PrkdcP97313 Olfr1249-201ENSMUST00000099769 957 ntAPPRIS P1 BASIC2.58□□□□□ -2
PrkdcP97313 Larp4-201ENSMUST00000057632 6527 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
PrkdcP97313 Olfr895-202ENSMUST00000212156 1558 ntAPPRIS P1 TSL 3 BASIC2.58□□□□□ -2
PrkdcP97313 Mbd5-202ENSMUST00000112745 6037 ntTSL 1 (best) BASIC2.58□□□□□ -2
PrkdcP97313 AC152981.1-201ENSMUST00000218320 2480 ntBASIC2.58□□□□□ -2
PrkdcP97313 Olfr1028-201ENSMUST00000080698 3474 ntAPPRIS P1 BASIC2.58□□□□□ -2
PrkdcP97313 Gm6545-201ENSMUST00000217186 1786 ntBASIC2.58□□□□□ -2
PrkdcP97313 Ssxb9-201ENSMUST00000115584 879 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
PrkdcP97313 Gm25519-201ENSMUST00000158392 127 ntBASIC2.57□□□□□ -2
PrkdcP97313 Gm2427-201ENSMUST00000189121 881 ntBASIC2.57□□□□□ -2
PrkdcP97313 1700024B18Rik-201ENSMUST00000190088 423 ntTSL 1 (best) BASIC2.57□□□□□ -2
PrkdcP97313 Cyp2b26-ps-201ENSMUST00000206238 1090 ntBASIC2.57□□□□□ -2
PrkdcP97313 Smarca2-220ENSMUST00000207054 2333 ntTSL 5 BASIC2.57□□□□□ -2
PrkdcP97313 Olfr91-203ENSMUST00000217372 3809 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
PrkdcP97313 Rapgef4-201ENSMUST00000028525 4109 ntTSL 1 (best) BASIC2.57□□□□□ -2
PrkdcP97313 Ssxb1-201ENSMUST00000037297 875 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
PrkdcP97313 Vmn1r26-201ENSMUST00000049694 1020 ntAPPRIS P1 BASIC2.57□□□□□ -2
PrkdcP97313 Olfr266-201ENSMUST00000059486 1027 ntAPPRIS P1 BASIC2.57□□□□□ -2
PrkdcP97313 Olfr586-201ENSMUST00000084811 954 ntAPPRIS P2 BASIC2.57□□□□□ -2
PrkdcP97313 Gm34885-201ENSMUST00000217440 4070 ntTSL 1 (best) BASIC2.57□□□□□ -2
PrkdcP97313 4921501E09Rik-201ENSMUST00000024121 3916 ntAPPRIS P1 BASIC2.57□□□□□ -2
PrkdcP97313 Olfr711-202ENSMUST00000207200 2966 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
PrkdcP97313 Ryr3-201ENSMUST00000080673 15422 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
PrkdcP97313 Trps1-206ENSMUST00000184458 5293 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
PrkdcP97313 Gm40020-201ENSMUST00000215677 1635 ntBASIC2.57□□□□□ -2
PrkdcP97313 Ncl-201ENSMUST00000027438 8202 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
PrkdcP97313 Tet2-201ENSMUST00000098603 9179 ntAPPRIS P3 TSL 5 BASIC2.57□□□□□ -2
PrkdcP97313 Sphkap-205ENSMUST00000160953 8154 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
PrkdcP97313 Uqcrh-ps2-201ENSMUST00000121613 269 ntBASIC2.57□□□□□ -2
PrkdcP97313 Mir3075-201ENSMUST00000175340 85 ntBASIC2.57□□□□□ -2
PrkdcP97313 Gm29064-201ENSMUST00000187014 813 ntBASIC2.57□□□□□ -2
PrkdcP97313 Gm43308-201ENSMUST00000197236 373 ntBASIC2.57□□□□□ -2
PrkdcP97313 1700042D02Rik-201ENSMUST00000198232 389 ntTSL 1 (best) BASIC2.57□□□□□ -2
PrkdcP97313 Olfr806-201ENSMUST00000095245 942 ntAPPRIS P1 BASIC2.57□□□□□ -2
PrkdcP97313 Olfr1012-202ENSMUST00000214255 3115 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
PrkdcP97313 Mbnl1-207ENSMUST00000192607 4552 ntTSL 1 (best) BASIC2.57□□□□□ -2
PrkdcP97313 Gm45257-201ENSMUST00000210301 3998 ntBASIC2.57□□□□□ -2
PrkdcP97313 Vmn2r51-201ENSMUST00000094863 2559 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
PrkdcP97313 Gm44678-201ENSMUST00000207828 2775 ntBASIC2.57□□□□□ -2
PrkdcP97313 Gm19514-201ENSMUST00000206856 4489 ntBASIC2.57□□□□□ -2
PrkdcP97313 Gm3543-201ENSMUST00000111870 899 ntAPPRIS P1 TSL 3 BASIC2.57□□□□□ -2
PrkdcP97313 Gm12543-201ENSMUST00000120410 543 ntBASIC2.57□□□□□ -2
PrkdcP97313 Gm15323-201ENSMUST00000156109 429 ntTSL 3 BASIC2.57□□□□□ -2
PrkdcP97313 Gm16563-201ENSMUST00000162673 423 ntBASIC2.57□□□□□ -2
PrkdcP97313 AC154527.5-201ENSMUST00000224448 496 ntBASIC2.57□□□□□ -2
PrkdcP97313 Gm24533-201ENSMUST00000083138 196 ntBASIC2.57□□□□□ -2
PrkdcP97313 Wdr17-206ENSMUST00000144711 4720 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
PrkdcP97313 Gm44625-201ENSMUST00000207838 1561 ntBASIC2.57□□□□□ -2
PrkdcP97313 Gm4788-201ENSMUST00000027612 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
PrkdcP97313 Senp8-201ENSMUST00000051039 3682 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
PrkdcP97313 Olfr1484-206ENSMUST00000217451 3628 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
PrkdcP97313 St18-208ENSMUST00000140079 5892 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
PrkdcP97313 Gm45160-201ENSMUST00000207112 3099 ntBASIC2.57□□□□□ -2
PrkdcP97313 Angpt1-201ENSMUST00000022921 4260 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
PrkdcP97313 Gm14861-201ENSMUST00000119451 455 ntBASIC2.57□□□□□ -2
PrkdcP97313 Gm25714-201ENSMUST00000158626 296 ntBASIC2.57□□□□□ -2
PrkdcP97313 Gm26556-201ENSMUST00000180645 320 ntBASIC2.57□□□□□ -2
PrkdcP97313 Gm44308-201ENSMUST00000197080 99 ntBASIC2.57□□□□□ -2
PrkdcP97313 CT485612.3-201ENSMUST00000222179 408 ntBASIC2.57□□□□□ -2
PrkdcP97313 CT025548.1-201ENSMUST00000227459 257 ntBASIC2.57□□□□□ -2
PrkdcP97313 Dock10-209ENSMUST00000190983 6672 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
PrkdcP97313 Gm16794-201ENSMUST00000180727 2100 ntTSL 1 (best) BASIC2.56□□□□□ -2
PrkdcP97313 Olfr1202-202ENSMUST00000214703 3665 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
PrkdcP97313 Gm14661-201ENSMUST00000152669 2051 ntTSL 5 BASIC2.56□□□□□ -2
PrkdcP97313 Scaper-205ENSMUST00000217647 4370 ntAPPRIS P2 TSL 5 BASIC2.56□□□□□ -2
PrkdcP97313 Olfr571-202ENSMUST00000214160 4999 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
PrkdcP97313 Gm37611-201ENSMUST00000195250 2028 ntBASIC2.56□□□□□ -2
PrkdcP97313 Vmn1r79-202ENSMUST00000226953 5636 ntAPPRIS P1 BASIC2.56□□□□□ -2
PrkdcP97313 Agl-201ENSMUST00000040603 9625 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
PrkdcP97313 Olfr361-202ENSMUST00000214969 2749 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
PrkdcP97313 Gm12087-201ENSMUST00000121878 258 ntBASIC2.56□□□□□ -2
PrkdcP97313 Gm14435-202ENSMUST00000127687 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
PrkdcP97313 Gm42694-201ENSMUST00000196951 358 ntBASIC2.56□□□□□ -2
PrkdcP97313 AC132324.1-201ENSMUST00000221855 584 ntTSL 5 BASIC2.56□□□□□ -2
PrkdcP97313 AC130477.2-201ENSMUST00000228158 274 ntBASIC2.56□□□□□ -2
PrkdcP97313 Olfr19-202ENSMUST00000206365 1967 ntAPPRIS P1 TSL 3 BASIC2.56□□□□□ -2
PrkdcP97313 Csnk1g1-201ENSMUST00000034949 7208 ntAPPRIS P2 TSL 1 (best) BASIC2.56□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms