Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Olfr220-202ENSMUST00000194229 3286 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
Cux1P53564 Olfr642-202ENSMUST00000214299 4715 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Cux1P53564 Gm38374-201ENSMUST00000194417 2033 ntBASIC5.73□□□□□ -1.49
Cux1P53564 Cp-201ENSMUST00000003714 4092 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Cux1P53564 Zfp950-204ENSMUST00000143264 4825 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Cux1P53564 Cfhr1-201ENSMUST00000023965 1793 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Cux1P53564 Peli1-202ENSMUST00000101477 3703 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Cux1P53564 Olfr1322-202ENSMUST00000217355 3886 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Cux1P53564 Gm24118-201ENSMUST00000103972 126 ntBASIC5.73□□□□□ -1.49
Cux1P53564 Gm13650-201ENSMUST00000117729 433 ntBASIC5.73□□□□□ -1.49
Cux1P53564 Gm13459-201ENSMUST00000121558 646 ntBASIC5.73□□□□□ -1.49
Cux1P53564 Gm13508-201ENSMUST00000121639 775 ntBASIC5.73□□□□□ -1.49
Cux1P53564 Gm13874-201ENSMUST00000130680 809 ntTSL 5 BASIC5.73□□□□□ -1.49
Cux1P53564 4930527E20Rik-201ENSMUST00000135700 351 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Cux1P53564 Gm28924-201ENSMUST00000190012 241 ntBASIC5.73□□□□□ -1.49
Cux1P53564 Gm43155-201ENSMUST00000202661 494 ntBASIC5.73□□□□□ -1.49
Cux1P53564 AC153544.1-201ENSMUST00000217988 400 ntBASIC5.73□□□□□ -1.49
Cux1P53564 AC100590.2-201ENSMUST00000219028 215 ntBASIC5.73□□□□□ -1.49
Cux1P53564 Tsx-201ENSMUST00000033691 812 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Cux1P53564 Gm9765-201ENSMUST00000043170 321 ntBASIC5.73□□□□□ -1.49
Cux1P53564 Vmn2r19-201ENSMUST00000073948 2565 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Cux1P53564 Steap2-204ENSMUST00000115426 10408 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Cux1P53564 Abi3bp-204ENSMUST00000171000 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Cux1P53564 Gm43824-201ENSMUST00000199042 2588 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Cux1P53564 Nlrp9a-204ENSMUST00000122040 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Cux1P53564 Frmpd3-201ENSMUST00000044702 3141 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Cux1P53564 Olfr476-202ENSMUST00000217173 2539 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Cux1P53564 Olfr1274-ps-202ENSMUST00000216111 3395 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Cux1P53564 Gm20775-201ENSMUST00000100115 1851 ntBASIC5.72□□□□□ -1.49
Cux1P53564 Sult2a1-201ENSMUST00000108522 1020 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Cux1P53564 Gm15387-201ENSMUST00000120421 648 ntBASIC5.72□□□□□ -1.49
Cux1P53564 Gm12005-201ENSMUST00000121451 379 ntBASIC5.72□□□□□ -1.49
Cux1P53564 Gm24936-201ENSMUST00000122598 247 ntBASIC5.72□□□□□ -1.49
Cux1P53564 Gm11195-201ENSMUST00000135030 441 ntTSL 3 BASIC5.72□□□□□ -1.49
Cux1P53564 Gm24059-201ENSMUST00000157493 312 ntBASIC5.72□□□□□ -1.49
Cux1P53564 Hmgb1-ps7-201ENSMUST00000173370 648 ntBASIC5.72□□□□□ -1.49
Cux1P53564 Gm26607-201ENSMUST00000180661 867 ntBASIC5.72□□□□□ -1.49
Cux1P53564 Gm35625-202ENSMUST00000211040 266 ntTSL 3 BASIC5.72□□□□□ -1.49
Cux1P53564 Gm35857-201ENSMUST00000212739 178 ntBASIC5.72□□□□□ -1.49
Cux1P53564 Olfr1029-201ENSMUST00000082191 1061 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Cux1P53564 Snord35b-201ENSMUST00000082833 87 ntBASIC5.72□□□□□ -1.49
Cux1P53564 Mir128-1-201ENSMUST00000083586 70 ntBASIC5.72□□□□□ -1.49
Cux1P53564 Gm5518-201ENSMUST00000084171 648 ntBASIC5.72□□□□□ -1.49
Cux1P53564 Olfr298-203ENSMUST00000216968 3451 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Cux1P53564 Vmn2r3-201ENSMUST00000170244 2670 ntAPPRIS P2 TSL 5 BASIC5.71□□□□□ -1.49
Cux1P53564 Gm40020-201ENSMUST00000215677 1635 ntBASIC5.71□□□□□ -1.49
Cux1P53564 Vmn2r-ps36-201ENSMUST00000172589 2562 ntBASIC5.71□□□□□ -1.49
Cux1P53564 Gm4064-201ENSMUST00000187482 1561 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Cux1P53564 Gm42486-201ENSMUST00000200369 3486 ntBASIC5.71□□□□□ -1.5
Cux1P53564 Gm45030-201ENSMUST00000207575 1774 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Cux1P53564 Tfpi2-201ENSMUST00000031674 1530 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Cux1P53564 Gm34885-201ENSMUST00000217440 4070 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Cux1P53564 Gm10375-201ENSMUST00000100692 836 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Cux1P53564 Cldn34d-201ENSMUST00000114054 1003 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Cux1P53564 Gm13664-201ENSMUST00000117304 345 ntBASIC5.71□□□□□ -1.5
Cux1P53564 Gm16064-201ENSMUST00000154997 464 ntTSL 2 BASIC5.71□□□□□ -1.5
Cux1P53564 Gm24402-201ENSMUST00000157873 91 ntBASIC5.71□□□□□ -1.5
Cux1P53564 Gm18330-201ENSMUST00000199246 547 ntBASIC5.71□□□□□ -1.5
Cux1P53564 Olfr1498-ps1-201ENSMUST00000208721 991 ntBASIC5.71□□□□□ -1.5
Cux1P53564 Olfr944-202ENSMUST00000213908 1257 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
Cux1P53564 Vmn1r179-201ENSMUST00000049819 972 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Cux1P53564 Olfr294-201ENSMUST00000078588 1008 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Cux1P53564 Gm8724-201ENSMUST00000081668 483 ntBASIC5.71□□□□□ -1.5
Cux1P53564 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Cux1P53564 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
Cux1P53564 Gm14305-202ENSMUST00000108981 1646 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
Cux1P53564 Steap2-209ENSMUST00000164219 10089 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
Cux1P53564 Cyp3a25-201ENSMUST00000068317 2000 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Cux1P53564 Vmn2r67-201ENSMUST00000168730 2556 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Cux1P53564 Cdh19-201ENSMUST00000094626 3914 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Cux1P53564 Cysltr1-202ENSMUST00000113480 5142 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Cux1P53564 Gm12125-201ENSMUST00000117261 736 ntBASIC5.7□□□□□ -1.5
Cux1P53564 Gm3788-201ENSMUST00000119949 136 ntBASIC5.7□□□□□ -1.5
Cux1P53564 Gm24739-201ENSMUST00000158855 292 ntBASIC5.7□□□□□ -1.5
Cux1P53564 Gm4540-201ENSMUST00000170669 429 ntBASIC5.7□□□□□ -1.5
Cux1P53564 1810022K09Rik-203ENSMUST00000185423 278 ntTSL 3 BASIC5.7□□□□□ -1.5
Cux1P53564 1700054K19Rik-201ENSMUST00000186102 452 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Cux1P53564 Gm18342-201ENSMUST00000186987 694 ntBASIC5.7□□□□□ -1.5
Cux1P53564 Gm37853-201ENSMUST00000195748 660 ntTSL 3 BASIC5.7□□□□□ -1.5
Cux1P53564 Gm43491-201ENSMUST00000197133 784 ntBASIC5.7□□□□□ -1.5
Cux1P53564 Gm43150-201ENSMUST00000200931 636 ntTSL 3 BASIC5.7□□□□□ -1.5
Cux1P53564 Gm9712-201ENSMUST00000210842 311 ntBASIC5.7□□□□□ -1.5
Cux1P53564 AC117656.3-202ENSMUST00000225842 1055 ntBASIC5.7□□□□□ -1.5
Cux1P53564 Serpinb3d-201ENSMUST00000023861 1216 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Cux1P53564 Olfr164-201ENSMUST00000056727 1095 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Cux1P53564 Olfr926-201ENSMUST00000078289 1051 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Cux1P53564 Jrkl-201ENSMUST00000110582 3223 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Cux1P53564 Vmn1r209-202ENSMUST00000227038 6461 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Cux1P53564 Cfh-203ENSMUST00000111977 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Cux1P53564 Igsf10-202ENSMUST00000193455 8484 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Cux1P53564 Polk-205ENSMUST00000221899 2319 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Cux1P53564 Vmn1r201-203ENSMUST00000226965 4741 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Cux1P53564 Mdn1-201ENSMUST00000071642 17970 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
Cux1P53564 Vmn1r39-207ENSMUST00000228862 2398 ntAPPRIS P2 BASIC5.7□□□□□ -1.5
Cux1P53564 Olfr17-202ENSMUST00000210568 3666 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Cux1P53564 Gm23322-201ENSMUST00000104464 167 ntBASIC5.69□□□□□ -1.5
Cux1P53564 Gm12412-201ENSMUST00000121867 328 ntBASIC5.69□□□□□ -1.5
Cux1P53564 Crem-231ENSMUST00000152108 654 ntTSL 5 BASIC5.69□□□□□ -1.5
Cux1P53564 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Cux1P53564 Gm29327-201ENSMUST00000188229 388 ntTSL 5 BASIC5.69□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 86.7 ms