Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm16157-201ENSMUST00000124813 534 ntTSL 3 BASIC6.42□□□□□ -1.38
Rfx1P48377 Platr3-201ENSMUST00000146980 412 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Rfx1P48377 Sox5os3-202ENSMUST00000154167 765 ntTSL 3 BASIC6.42□□□□□ -1.38
Rfx1P48377 Gm10177-201ENSMUST00000160052 444 ntBASIC6.42□□□□□ -1.38
Rfx1P48377 Ear-ps3-201ENSMUST00000168308 445 ntBASIC6.42□□□□□ -1.38
Rfx1P48377 Gm26335-201ENSMUST00000178449 107 ntBASIC6.42□□□□□ -1.38
Rfx1P48377 Gm5058-201ENSMUST00000187331 463 ntBASIC6.42□□□□□ -1.38
Rfx1P48377 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Rfx1P48377 Gm29065-201ENSMUST00000188786 487 ntTSL 3 BASIC6.42□□□□□ -1.38
Rfx1P48377 Gm37658-201ENSMUST00000192672 315 ntBASIC6.42□□□□□ -1.38
Rfx1P48377 1700040K01Rik-201ENSMUST00000195145 438 ntBASIC6.42□□□□□ -1.38
Rfx1P48377 Gm43392-201ENSMUST00000196560 434 ntBASIC6.42□□□□□ -1.38
Rfx1P48377 Gm21655-202ENSMUST00000199295 2975 ntTSL 5 BASIC6.42□□□□□ -1.38
Rfx1P48377 Gm21680-201ENSMUST00000200447 2975 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Rfx1P48377 Igkv13-74-1-201ENSMUST00000200611 242 ntBASIC6.42□□□□□ -1.38
Rfx1P48377 Gm36243-201ENSMUST00000211546 610 ntTSL 3 BASIC6.42□□□□□ -1.38
Rfx1P48377 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Rfx1P48377 AC156037.1-201ENSMUST00000221133 127 ntBASIC6.42□□□□□ -1.38
Rfx1P48377 AC125543.3-201ENSMUST00000221991 126 ntBASIC6.42□□□□□ -1.38
Rfx1P48377 AC154426.1-201ENSMUST00000225614 1132 ntBASIC6.42□□□□□ -1.38
Rfx1P48377 AC159205.4-201ENSMUST00000225964 704 ntBASIC6.42□□□□□ -1.38
Rfx1P48377 Ctag2-201ENSMUST00000033524 854 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Rfx1P48377 Gm5168-201ENSMUST00000089165 824 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Rfx1P48377 Ube2v2-201ENSMUST00000096234 609 ntTSL 3 BASIC6.42□□□□□ -1.38
Rfx1P48377 Gm43209-201ENSMUST00000198949 1588 ntBASIC6.42□□□□□ -1.38
Rfx1P48377 Acsm3-202ENSMUST00000106526 2704 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Rfx1P48377 Enpp2-203ENSMUST00000171545 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Rfx1P48377 9330159M07Rik-201ENSMUST00000180712 2702 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Rfx1P48377 9230109A22Rik-202ENSMUST00000228644 1853 ntBASIC6.42□□□□□ -1.38
Rfx1P48377 Slc6a15-201ENSMUST00000074204 3607 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Rfx1P48377 Mef2c-202ENSMUST00000163888 6277 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Rfx1P48377 Olfr1286-203ENSMUST00000213210 3740 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Rfx1P48377 Gm732-201ENSMUST00000101290 1661 ntAPPRIS P2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Rfx1P48377 Zfp456-201ENSMUST00000057070 4126 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Rfx1P48377 Vmn1r90-206ENSMUST00000227566 6901 ntAPPRIS ALT2 BASIC6.42□□□□□ -1.38
Rfx1P48377 Iqch-203ENSMUST00000163624 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Rfx1P48377 Gm37357-201ENSMUST00000192386 3123 ntBASIC6.41□□□□□ -1.38
Rfx1P48377 Tom1l1-204ENSMUST00000107869 1826 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Rfx1P48377 Gm44424-201ENSMUST00000203438 1826 ntBASIC6.41□□□□□ -1.38
Rfx1P48377 Olfr684-202ENSMUST00000215552 3174 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Rfx1P48377 Zfp758-203ENSMUST00000121315 2860 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
Rfx1P48377 Gm44321-201ENSMUST00000204262 2855 ntBASIC6.41□□□□□ -1.38
Rfx1P48377 Zfp606-205ENSMUST00000209403 2211 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
Rfx1P48377 Clca4b-201ENSMUST00000098549 2997 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Rfx1P48377 Rptn-201ENSMUST00000045912 4146 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Rfx1P48377 Olfr721-ps1-203ENSMUST00000215479 3075 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Rfx1P48377 Traj18-201ENSMUST00000103723 66 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Rfx1P48377 Gm11372-201ENSMUST00000117348 570 ntBASIC6.41□□□□□ -1.38
Rfx1P48377 Gm15025-201ENSMUST00000118434 418 ntBASIC6.41□□□□□ -1.38
Rfx1P48377 Rps12-ps16-201ENSMUST00000118529 399 ntBASIC6.41□□□□□ -1.38
Rfx1P48377 Gm14580-201ENSMUST00000119122 718 ntBASIC6.41□□□□□ -1.38
Rfx1P48377 Gm11325-201ENSMUST00000119967 469 ntBASIC6.41□□□□□ -1.38
Rfx1P48377 Gm14434-201ENSMUST00000120521 559 ntTSL 3 BASIC6.41□□□□□ -1.38
Rfx1P48377 Gm15014-201ENSMUST00000120742 258 ntBASIC6.41□□□□□ -1.38
Rfx1P48377 Gm14915-201ENSMUST00000120747 204 ntBASIC6.41□□□□□ -1.38
Rfx1P48377 Gm13259-201ENSMUST00000120792 456 ntBASIC6.41□□□□□ -1.38
Rfx1P48377 Gm13973-201ENSMUST00000121371 894 ntBASIC6.41□□□□□ -1.38
Rfx1P48377 Gm15899-201ENSMUST00000128586 238 ntBASIC6.41□□□□□ -1.38
Rfx1P48377 Gm11659-201ENSMUST00000137561 466 ntTSL 3 BASIC6.41□□□□□ -1.38
Rfx1P48377 Gm22084-201ENSMUST00000157585 105 ntBASIC6.41□□□□□ -1.38
Rfx1P48377 Gm22599-201ENSMUST00000157597 132 ntBASIC6.41□□□□□ -1.38
Rfx1P48377 Gm25846-201ENSMUST00000158013 135 ntBASIC6.41□□□□□ -1.38
Rfx1P48377 Gm23855-201ENSMUST00000158377 135 ntBASIC6.41□□□□□ -1.38
Rfx1P48377 Gm23024-201ENSMUST00000158770 292 ntBASIC6.41□□□□□ -1.38
Rfx1P48377 Gm15995-201ENSMUST00000159897 574 ntTSL 5 BASIC6.41□□□□□ -1.38
Rfx1P48377 Gm16134-201ENSMUST00000161714 336 ntBASIC6.41□□□□□ -1.38
Rfx1P48377 Gm17366-201ENSMUST00000167629 187 ntBASIC6.41□□□□□ -1.38
Rfx1P48377 Vmn1r-ps25-201ENSMUST00000173545 799 ntBASIC6.41□□□□□ -1.38
Rfx1P48377 Rps12-ps13-201ENSMUST00000178365 399 ntBASIC6.41□□□□□ -1.38
Rfx1P48377 Rps12-ps11-201ENSMUST00000178427 399 ntBASIC6.41□□□□□ -1.38
Rfx1P48377 Rps12-ps12-201ENSMUST00000179020 399 ntBASIC6.41□□□□□ -1.38
Rfx1P48377 Rps12-ps17-201ENSMUST00000179067 399 ntBASIC6.41□□□□□ -1.38
Rfx1P48377 Rps12-ps6-201ENSMUST00000179239 399 ntBASIC6.41□□□□□ -1.38
Rfx1P48377 Rps12-ps14-201ENSMUST00000179356 399 ntBASIC6.41□□□□□ -1.38
Rfx1P48377 Rps12-ps18-201ENSMUST00000179420 399 ntBASIC6.41□□□□□ -1.38
Rfx1P48377 Rps12-ps15-201ENSMUST00000179567 399 ntBASIC6.41□□□□□ -1.38
Rfx1P48377 Gm21991-201ENSMUST00000180006 508 ntBASIC6.41□□□□□ -1.38
Rfx1P48377 2310010J17Rik-201ENSMUST00000181189 490 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Rfx1P48377 Rps12l1-201ENSMUST00000183090 399 ntBASIC6.41□□□□□ -1.38
Rfx1P48377 1700108F19Rik-207ENSMUST00000191384 210 ntTSL 3 BASIC6.41□□□□□ -1.38
Rfx1P48377 Gm37404-201ENSMUST00000195726 359 ntBASIC6.41□□□□□ -1.38
Rfx1P48377 Gm43238-201ENSMUST00000196463 359 ntBASIC6.41□□□□□ -1.38
Rfx1P48377 Gm5552-201ENSMUST00000197149 515 ntBASIC6.41□□□□□ -1.38
Rfx1P48377 Gm30484-201ENSMUST00000200327 449 ntTSL 5 BASIC6.41□□□□□ -1.38
Rfx1P48377 Gm19060-201ENSMUST00000201959 421 ntBASIC6.41□□□□□ -1.38
Rfx1P48377 Gm43105-201ENSMUST00000202987 459 ntBASIC6.41□□□□□ -1.38
Rfx1P48377 Gm8719-201ENSMUST00000203602 534 ntBASIC6.41□□□□□ -1.38
Rfx1P48377 Gm45427-201ENSMUST00000209572 1253 ntBASIC6.41□□□□□ -1.38
Rfx1P48377 Gm44992-214ENSMUST00000210787 1079 ntTSL 5 BASIC6.41□□□□□ -1.38
Rfx1P48377 Gm30676-201ENSMUST00000214000 1165 ntTSL 5 BASIC6.41□□□□□ -1.38
Rfx1P48377 Gm2446-201ENSMUST00000220144 772 ntBASIC6.41□□□□□ -1.38
Rfx1P48377 Gm11360-201ENSMUST00000221898 262 ntBASIC6.41□□□□□ -1.38
Rfx1P48377 CT030238.4-201ENSMUST00000228579 801 ntBASIC6.41□□□□□ -1.38
Rfx1P48377 Olfr146-201ENSMUST00000073671 1061 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Rfx1P48377 Mup5-201ENSMUST00000082287 925 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Rfx1P48377 Gm25008-201ENSMUST00000083809 81 ntBASIC6.41□□□□□ -1.38
Rfx1P48377 Pum2-204ENSMUST00000163569 3560 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
Rfx1P48377 Ceacam2-201ENSMUST00000044547 2844 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Rfx1P48377 Gm19335-201ENSMUST00000195836 2069 ntBASIC6.41□□□□□ -1.38
Rfx1P48377 Serpina3b-201ENSMUST00000085052 2070 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms