Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Csn1s2a-209ENSMUST00000200322 797 ntAPPRIS ALT2 TSL 2 BASIC5.01□□□□□ -1.61
Traf1P39428 4930598N05Rik-204ENSMUST00000207733 675 ntTSL 3 BASIC5.01□□□□□ -1.61
Traf1P39428 AC153382.1-201ENSMUST00000217953 1007 ntTSL 5 BASIC5.01□□□□□ -1.61
Traf1P39428 AC159472.1-201ENSMUST00000218178 463 ntBASIC5.01□□□□□ -1.61
Traf1P39428 AC160756.1-201ENSMUST00000227266 235 ntBASIC5.01□□□□□ -1.61
Traf1P39428 Stap1-201ENSMUST00000031171 909 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Traf1P39428 E330017A01Rik-201ENSMUST00000053249 1108 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Traf1P39428 Sprr2e-201ENSMUST00000068399 647 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Traf1P39428 Vmn1r80-201ENSMUST00000075053 927 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Traf1P39428 Olfr262-201ENSMUST00000087818 939 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Traf1P39428 Olfr205-202ENSMUST00000213910 1650 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Traf1P39428 Gm3665-201ENSMUST00000177214 2461 ntBASIC5.01□□□□□ -1.61
Traf1P39428 Vmn2r-ps51-201ENSMUST00000177271 2461 ntBASIC5.01□□□□□ -1.61
Traf1P39428 Gm43059-201ENSMUST00000202437 1388 ntBASIC5.01□□□□□ -1.61
Traf1P39428 Has2-201ENSMUST00000050544 4237 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Traf1P39428 Tenm1-203ENSMUST00000115059 12879 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
Traf1P39428 Vmn1r42-202ENSMUST00000226436 4045 ntAPPRIS P1 BASIC5□□□□□ -1.61
Traf1P39428 AY358078-201ENSMUST00000053821 1461 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Traf1P39428 Olfr1270-206ENSMUST00000217139 4803 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Traf1P39428 Olfr112-204ENSMUST00000208832 3173 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Traf1P39428 Zscan4f-202ENSMUST00000145237 1829 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Traf1P39428 Cdh7-209ENSMUST00000172005 3353 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Traf1P39428 Gm37742-201ENSMUST00000193263 3979 ntBASIC5□□□□□ -1.61
Traf1P39428 4930503E14Rik-201ENSMUST00000100688 1287 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Traf1P39428 Igkv11-125-201ENSMUST00000103311 350 ntAPPRIS ALT2 BASIC5□□□□□ -1.61
Traf1P39428 Gm14305-201ENSMUST00000108980 1167 ntTSL 1 (best) BASIC5□□□□□ -1.61
Traf1P39428 Ctps2-203ENSMUST00000112300 741 ntTSL 3 BASIC5□□□□□ -1.61
Traf1P39428 Gm14365-201ENSMUST00000117535 587 ntBASIC5□□□□□ -1.61
Traf1P39428 Gm6373-201ENSMUST00000121026 360 ntBASIC5□□□□□ -1.61
Traf1P39428 Gm24592-201ENSMUST00000122505 106 ntBASIC5□□□□□ -1.61
Traf1P39428 Gm26187-201ENSMUST00000157693 101 ntBASIC5□□□□□ -1.61
Traf1P39428 Gm25386-201ENSMUST00000157814 288 ntBASIC5□□□□□ -1.61
Traf1P39428 Vmn2r-ps85-201ENSMUST00000174022 940 ntBASIC5□□□□□ -1.61
Traf1P39428 Gm8807-201ENSMUST00000179328 492 ntBASIC5□□□□□ -1.61
Traf1P39428 Mir6537-201ENSMUST00000184150 110 ntBASIC5□□□□□ -1.61
Traf1P39428 Gm27899-201ENSMUST00000184715 64 ntBASIC5□□□□□ -1.61
Traf1P39428 Gm3259-205ENSMUST00000185432 1077 ntTSL 3 BASIC5□□□□□ -1.61
Traf1P39428 Gm28625-201ENSMUST00000188309 205 ntBASIC5□□□□□ -1.61
Traf1P39428 Galntl6-205ENSMUST00000188531 1056 ntTSL 5 BASIC5□□□□□ -1.61
Traf1P39428 Gm4035-202ENSMUST00000190684 526 ntTSL 1 (best) BASIC5□□□□□ -1.61
Traf1P39428 Gm29359-201ENSMUST00000191007 495 ntTSL 5 BASIC5□□□□□ -1.61
Traf1P39428 Gm43635-201ENSMUST00000202533 352 ntTSL 3 BASIC5□□□□□ -1.61
Traf1P39428 Gm36633-201ENSMUST00000205873 647 ntTSL 1 (best) BASIC5□□□□□ -1.61
Traf1P39428 9430099M06Rik-201ENSMUST00000210409 742 ntBASIC5□□□□□ -1.61
Traf1P39428 AC154264.1-201ENSMUST00000216064 386 ntTSL 5 BASIC5□□□□□ -1.61
Traf1P39428 AC166263.1-201ENSMUST00000218586 238 ntBASIC5□□□□□ -1.61
Traf1P39428 Gm32443-202ENSMUST00000220011 773 ntTSL 5 BASIC5□□□□□ -1.61
Traf1P39428 1700011B04Rik-211ENSMUST00000222690 394 ntTSL 5 BASIC5□□□□□ -1.61
Traf1P39428 AC139750.2-201ENSMUST00000224424 386 ntBASIC5□□□□□ -1.61
Traf1P39428 AL606513.1-201ENSMUST00000225369 579 ntBASIC5□□□□□ -1.61
Traf1P39428 Vmn1r2-202ENSMUST00000226198 1126 ntAPPRIS P1 BASIC5□□□□□ -1.61
Traf1P39428 AC154239.2-201ENSMUST00000227859 233 ntBASIC5□□□□□ -1.61
Traf1P39428 Olfr844-201ENSMUST00000054106 930 ntBASIC5□□□□□ -1.61
Traf1P39428 Olfr1202-201ENSMUST00000072057 930 ntAPPRIS P1 BASIC5□□□□□ -1.61
Traf1P39428 n-R5s160-201ENSMUST00000083096 120 ntBASIC5□□□□□ -1.61
Traf1P39428 Olfr1249-201ENSMUST00000099769 957 ntAPPRIS P1 BASIC5□□□□□ -1.61
Traf1P39428 Gm4631-202ENSMUST00000121393 4402 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
Traf1P39428 A630033H20Rik-201ENSMUST00000067249 3004 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Traf1P39428 Fat3-205ENSMUST00000217308 18760 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Traf1P39428 Akap4-201ENSMUST00000057101 2851 ntAPPRIS P4 TSL 1 (best) BASIC5□□□□□ -1.61
Traf1P39428 Gm43871-201ENSMUST00000204931 1955 ntBASIC5□□□□□ -1.61
Traf1P39428 Tenm1-202ENSMUST00000115058 12837 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
Traf1P39428 Gm45160-201ENSMUST00000207112 3099 ntBASIC5□□□□□ -1.61
Traf1P39428 Cd180-201ENSMUST00000022124 2650 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Traf1P39428 Slfn9-202ENSMUST00000092840 3862 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Traf1P39428 Olfr1484-202ENSMUST00000208104 3621 ntTSL 2 BASIC4.99□□□□□ -1.61
Traf1P39428 Olfr1484-206ENSMUST00000217451 3628 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Traf1P39428 Fbxw28-204ENSMUST00000200156 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
Traf1P39428 Gm44682-201ENSMUST00000208501 2614 ntBASIC4.99□□□□□ -1.61
Traf1P39428 AC124446.1-201ENSMUST00000221027 2644 ntBASIC4.99□□□□□ -1.61
Traf1P39428 Cntn3-201ENSMUST00000032159 5183 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
Traf1P39428 Mef2c-201ENSMUST00000005722 6217 ntTSL 5 BASIC4.99□□□□□ -1.61
Traf1P39428 Gm15933-201ENSMUST00000117215 616 ntBASIC4.99□□□□□ -1.61
Traf1P39428 Gm12311-201ENSMUST00000118803 374 ntBASIC4.99□□□□□ -1.61
Traf1P39428 Gm15361-201ENSMUST00000119320 444 ntBASIC4.99□□□□□ -1.61
Traf1P39428 Gm14649-201ENSMUST00000121814 324 ntBASIC4.99□□□□□ -1.61
Traf1P39428 Gm25177-201ENSMUST00000122634 117 ntBASIC4.99□□□□□ -1.61
Traf1P39428 4930451E10Rik-201ENSMUST00000130840 409 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Traf1P39428 4931428L18Rik-202ENSMUST00000135245 889 ntAPPRIS P5 TSL 1 (best) BASIC4.99□□□□□ -1.61
Traf1P39428 Gm11775-201ENSMUST00000136500 773 ntTSL 5 BASIC4.99□□□□□ -1.61
Traf1P39428 C330018D20Rik-202ENSMUST00000139243 726 ntAPPRIS P1 TSL 3 BASIC4.99□□□□□ -1.61
Traf1P39428 Gm16084-201ENSMUST00000148122 620 ntTSL 3 BASIC4.99□□□□□ -1.61
Traf1P39428 4930505K14Rik-201ENSMUST00000155504 515 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Traf1P39428 Gm25598-201ENSMUST00000179031 107 ntBASIC4.99□□□□□ -1.61
Traf1P39428 Gm20812-201ENSMUST00000179220 684 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Traf1P39428 Gm28304-201ENSMUST00000185977 312 ntBASIC4.99□□□□□ -1.61
Traf1P39428 Gm28709-201ENSMUST00000186967 456 ntTSL 5 BASIC4.99□□□□□ -1.61
Traf1P39428 Gm29256-201ENSMUST00000189094 312 ntBASIC4.99□□□□□ -1.61
Traf1P39428 Gm28612-201ENSMUST00000189214 416 ntTSL 5 BASIC4.99□□□□□ -1.61
Traf1P39428 Gm28484-201ENSMUST00000190606 312 ntBASIC4.99□□□□□ -1.61
Traf1P39428 Gm44389-201ENSMUST00000203795 182 ntBASIC4.99□□□□□ -1.61
Traf1P39428 A730082K24Rik-201ENSMUST00000205365 465 ntTSL 3 BASIC4.99□□□□□ -1.61
Traf1P39428 Gm44773-201ENSMUST00000207374 557 ntBASIC4.99□□□□□ -1.61
Traf1P39428 Gm2516-201ENSMUST00000210011 954 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Traf1P39428 Olfr589-201ENSMUST00000061055 954 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Traf1P39428 Olfr1356-201ENSMUST00000061289 963 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Traf1P39428 Prl6a1-202ENSMUST00000091680 868 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
Traf1P39428 Olfr1162-201ENSMUST00000099837 945 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Traf1P39428 Olfr1309-206ENSMUST00000217452 5257 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Traf1P39428 1700017N19Rik-206ENSMUST00000190386 1483 ntTSL 5 BASIC4.99□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 91.4 ms