Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Gm8724-201ENSMUST00000081668 483 ntBASIC6.08□□□□□ -1.44
Pde6bP23440 Gm24207-201ENSMUST00000082781 108 ntBASIC6.08□□□□□ -1.44
Pde6bP23440 Gm25793-201ENSMUST00000083287 107 ntBASIC6.08□□□□□ -1.44
Pde6bP23440 Rlf-203ENSMUST00000168615 6585 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
Pde6bP23440 Ehf-203ENSMUST00000111176 3696 ntTSL 5 BASIC6.08□□□□□ -1.44
Pde6bP23440 Acvr1c-202ENSMUST00000100085 4289 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Pde6bP23440 Vmn2r-ps120-201ENSMUST00000176341 2409 ntBASIC6.08□□□□□ -1.44
Pde6bP23440 Vmn2r80-201ENSMUST00000165834 2690 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Pde6bP23440 Mmp1a-202ENSMUST00000217651 2011 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Pde6bP23440 AC162910.1-201ENSMUST00000221219 1723 ntBASIC6.08□□□□□ -1.44
Pde6bP23440 Iqca-207ENSMUST00000212394 2574 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
Pde6bP23440 Spp1-202ENSMUST00000086833 1411 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
Pde6bP23440 Map9-206ENSMUST00000195640 6162 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Pde6bP23440 Olfr1262-202ENSMUST00000111508 6068 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
Pde6bP23440 BC048559-202ENSMUST00000215667 3561 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Pde6bP23440 Hdlbp-204ENSMUST00000186164 3808 ntTSL 5 BASIC6.07□□□□□ -1.44
Pde6bP23440 Kcnu1-201ENSMUST00000098858 3536 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Pde6bP23440 Gm26791-201ENSMUST00000180942 1605 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Pde6bP23440 Epha3-201ENSMUST00000064405 5659 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Pde6bP23440 Vmn2r-ps123-201ENSMUST00000176763 2410 ntBASIC6.07□□□□□ -1.44
Pde6bP23440 Zkscan8-204ENSMUST00000224362 6954 ntAPPRIS ALT2 BASIC6.07□□□□□ -1.44
Pde6bP23440 A330087D11Rik-201ENSMUST00000187265 1334 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Pde6bP23440 Gm43843-201ENSMUST00000202396 1587 ntBASIC6.07□□□□□ -1.44
Pde6bP23440 Tbc1d23-201ENSMUST00000023431 3690 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Pde6bP23440 Wrn-202ENSMUST00000033991 6262 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Pde6bP23440 Map7d3-201ENSMUST00000114766 2891 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Pde6bP23440 Gm42686-201ENSMUST00000199172 4108 ntBASIC6.07□□□□□ -1.44
Pde6bP23440 Neb-201ENSMUST00000028320 10298 ntTSL 5 BASIC6.07□□□□□ -1.44
Pde6bP23440 G930045G22Rik-201ENSMUST00000101402 480 ntTSL 5 BASIC6.07□□□□□ -1.44
Pde6bP23440 Gm26396-201ENSMUST00000104093 132 ntBASIC6.07□□□□□ -1.44
Pde6bP23440 Gm25563-201ENSMUST00000104603 74 ntBASIC6.07□□□□□ -1.44
Pde6bP23440 Gm11898-201ENSMUST00000117161 385 ntBASIC6.07□□□□□ -1.44
Pde6bP23440 Gm9059-201ENSMUST00000118319 183 ntBASIC6.07□□□□□ -1.44
Pde6bP23440 Gm12808-201ENSMUST00000120597 404 ntBASIC6.07□□□□□ -1.44
Pde6bP23440 Gm11677-201ENSMUST00000121349 977 ntBASIC6.07□□□□□ -1.44
Pde6bP23440 Gm13007-201ENSMUST00000121866 365 ntBASIC6.07□□□□□ -1.44
Pde6bP23440 Gm11418-201ENSMUST00000156193 626 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Pde6bP23440 4430402I18Rik-203ENSMUST00000160542 1057 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Pde6bP23440 Gm4134-201ENSMUST00000173244 563 ntBASIC6.07□□□□□ -1.44
Pde6bP23440 Gm29433-201ENSMUST00000191241 253 ntTSL 5 BASIC6.07□□□□□ -1.44
Pde6bP23440 Gm37760-201ENSMUST00000194726 3841 ntBASIC6.07□□□□□ -1.44
Pde6bP23440 Gm38234-201ENSMUST00000195204 421 ntBASIC6.07□□□□□ -1.44
Pde6bP23440 Gm43617-201ENSMUST00000196418 606 ntTSL 2 BASIC6.07□□□□□ -1.44
Pde6bP23440 Gm43779-201ENSMUST00000196691 829 ntBASIC6.07□□□□□ -1.44
Pde6bP23440 Gm43467-201ENSMUST00000197441 437 ntBASIC6.07□□□□□ -1.44
Pde6bP23440 Gm5660-201ENSMUST00000197453 1149 ntBASIC6.07□□□□□ -1.44
Pde6bP23440 Gm29736-201ENSMUST00000198189 385 ntBASIC6.07□□□□□ -1.44
Pde6bP23440 4930434O05Rik-201ENSMUST00000203259 387 ntBASIC6.07□□□□□ -1.44
Pde6bP23440 Gm36159-201ENSMUST00000206737 549 ntTSL 3 BASIC6.07□□□□□ -1.44
Pde6bP23440 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC6.07□□□□□ -1.44
Pde6bP23440 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC6.07□□□□□ -1.44
Pde6bP23440 Gm45868-201ENSMUST00000210247 473 ntTSL 3 BASIC6.07□□□□□ -1.44
Pde6bP23440 Gm39348-202ENSMUST00000217239 375 ntTSL 2 BASIC6.07□□□□□ -1.44
Pde6bP23440 Gm36543-201ENSMUST00000217933 542 ntTSL 5 BASIC6.07□□□□□ -1.44
Pde6bP23440 Gm6049-201ENSMUST00000222369 458 ntBASIC6.07□□□□□ -1.44
Pde6bP23440 Gpx8-201ENSMUST00000022282 1018 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Pde6bP23440 AC154598.1-201ENSMUST00000227079 347 ntBASIC6.07□□□□□ -1.44
Pde6bP23440 Ifnk-201ENSMUST00000058595 805 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Pde6bP23440 Wfdc15a-201ENSMUST00000063251 488 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Pde6bP23440 Gm26056-201ENSMUST00000083043 104 ntBASIC6.07□□□□□ -1.44
Pde6bP23440 Mir134-201ENSMUST00000083492 71 ntBASIC6.07□□□□□ -1.44
Pde6bP23440 Olfr535-203ENSMUST00000213715 5033 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Pde6bP23440 Sult1b1-201ENSMUST00000031199 2604 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Pde6bP23440 Ppp1r1c-202ENSMUST00000090760 2644 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Pde6bP23440 Parp4-201ENSMUST00000161553 6387 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Pde6bP23440 Zfy2-202ENSMUST00000187148 2846 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Pde6bP23440 Eps8-202ENSMUST00000100841 4151 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Pde6bP23440 Vmn1r45-204ENSMUST00000227426 3205 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Pde6bP23440 Gm38590-202ENSMUST00000210654 1803 ntTSL 5 BASIC6.06□□□□□ -1.44
Pde6bP23440 Ing3-201ENSMUST00000031680 3800 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Pde6bP23440 Macf1-204ENSMUST00000106213 18957 ntTSL 5 BASIC6.06□□□□□ -1.44
Pde6bP23440 Olfr813-202ENSMUST00000204622 2410 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Pde6bP23440 Gm4841-201ENSMUST00000090260 2838 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
Pde6bP23440 Trhr-202ENSMUST00000110289 1745 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
Pde6bP23440 Arl13a-201ENSMUST00000064476 1740 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Pde6bP23440 Trps1-203ENSMUST00000183421 3446 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Pde6bP23440 AC115910.1-201ENSMUST00000221188 4275 ntBASIC6.06□□□□□ -1.44
Pde6bP23440 Igkv4-92-201ENSMUST00000103332 351 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Pde6bP23440 Trav8n-2-201ENSMUST00000103632 408 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Pde6bP23440 Ppih-202ENSMUST00000106317 613 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Pde6bP23440 Gm14459-201ENSMUST00000115573 540 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Pde6bP23440 Gm11262-201ENSMUST00000119326 833 ntBASIC6.06□□□□□ -1.44
Pde6bP23440 Gm11216-201ENSMUST00000125240 354 ntTSL 5 BASIC6.06□□□□□ -1.44
Pde6bP23440 Gm16321-201ENSMUST00000155184 574 ntTSL 3 BASIC6.06□□□□□ -1.44
Pde6bP23440 Mir1963-201ENSMUST00000158594 59 ntBASIC6.06□□□□□ -1.44
Pde6bP23440 Ear-ps3-201ENSMUST00000168308 445 ntBASIC6.06□□□□□ -1.44
Pde6bP23440 Gm3170-201ENSMUST00000168753 850 ntBASIC6.06□□□□□ -1.44
Pde6bP23440 Rab26os-202ENSMUST00000176921 298 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Pde6bP23440 Gm3348-201ENSMUST00000177813 850 ntBASIC6.06□□□□□ -1.44
Pde6bP23440 Mir6481-201ENSMUST00000184617 110 ntBASIC6.06□□□□□ -1.44
Pde6bP23440 Mir7087-201ENSMUST00000184840 70 ntBASIC6.06□□□□□ -1.44
Pde6bP23440 Gm29596-201ENSMUST00000185710 385 ntBASIC6.06□□□□□ -1.44
Pde6bP23440 Snhg14-205ENSMUST00000186345 456 ntTSL 5 BASIC6.06□□□□□ -1.44
Pde6bP23440 1700113H08Rik-203ENSMUST00000189775 798 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Pde6bP23440 Gm5734-201ENSMUST00000189787 913 ntBASIC6.06□□□□□ -1.44
Pde6bP23440 Gm38046-201ENSMUST00000192733 550 ntBASIC6.06□□□□□ -1.44
Pde6bP23440 Gm44040-201ENSMUST00000203360 545 ntTSL 3 BASIC6.06□□□□□ -1.44
Pde6bP23440 Gm44110-201ENSMUST00000203871 475 ntTSL 2 BASIC6.06□□□□□ -1.44
Pde6bP23440 Gm44852-201ENSMUST00000207950 369 ntBASIC6.06□□□□□ -1.44
Pde6bP23440 Olfr546-ps1-201ENSMUST00000210328 326 ntBASIC6.06□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 80.2 ms