Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Gm19131-201ENSMUST00000203408 789 ntBASIC3.69□□□□□ -1.82
P20040 C430039J01Rik-201ENSMUST00000205973 957 ntBASIC3.69□□□□□ -1.82
P20040 Gm18462-201ENSMUST00000208112 417 ntBASIC3.69□□□□□ -1.82
P20040 Gm19599-201ENSMUST00000218898 358 ntBASIC3.69□□□□□ -1.82
P20040 Gm7093-201ENSMUST00000223004 581 ntBASIC3.69□□□□□ -1.82
P20040 Gm46401-202ENSMUST00000223425 803 ntTSL 5 BASIC3.69□□□□□ -1.82
P20040 AC156803.1-201ENSMUST00000224407 820 ntBASIC3.69□□□□□ -1.82
P20040 CT025536.1-201ENSMUST00000226744 844 ntBASIC3.69□□□□□ -1.82
P20040 CT573086.3-201ENSMUST00000228762 594 ntBASIC3.69□□□□□ -1.82
P20040 Klhl13-201ENSMUST00000035973 2996 ntTSL 5 BASIC3.69□□□□□ -1.82
P20040 Gm5689-201ENSMUST00000041389 294 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
P20040 4930504O13Rik-201ENSMUST00000064614 549 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
P20040 BC048502-201ENSMUST00000065978 718 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
P20040 Olfr1458-201ENSMUST00000076729 906 ntAPPRIS ALT2 BASIC3.69□□□□□ -1.82
P20040 Gm26064-201ENSMUST00000083381 109 ntBASIC3.69□□□□□ -1.82
P20040 n-R5s7-201ENSMUST00000083755 121 ntBASIC3.69□□□□□ -1.82
P20040 Ccl26-201ENSMUST00000094226 282 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
P20040 AC135119.1-201ENSMUST00000227935 3717 ntBASIC3.69□□□□□ -1.82
P20040 Gm38240-201ENSMUST00000195110 2487 ntBASIC3.69□□□□□ -1.82
P20040 AC153522.2-201ENSMUST00000218389 3853 ntBASIC3.69□□□□□ -1.82
P20040 Olfr149-202ENSMUST00000215192 2806 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
P20040 Cd84-205ENSMUST00000155802 3291 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
P20040 Olfr235-202ENSMUST00000207969 2447 ntAPPRIS P1 TSL 3 BASIC3.69□□□□□ -1.82
P20040 Vmn1r215-202ENSMUST00000228092 2790 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
P20040 Vmn2r7-202ENSMUST00000161972 3583 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
P20040 Gm27162-201ENSMUST00000185169 2478 ntTSL 2 BASIC3.68□□□□□ -1.82
P20040 Olfr969-202ENSMUST00000213266 1597 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
P20040 Tenm1-202ENSMUST00000115058 12837 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
P20040 Vmn1r47-203ENSMUST00000227811 6792 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
P20040 Vmn2r-ps45-201ENSMUST00000174138 2435 ntBASIC3.68□□□□□ -1.82
P20040 AC153964.1-201ENSMUST00000219677 3142 ntBASIC3.68□□□□□ -1.82
P20040 Igkv8-19-201ENSMUST00000103389 305 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
P20040 Gm15148-201ENSMUST00000117602 156 ntBASIC3.68□□□□□ -1.82
P20040 Gm16373-201ENSMUST00000129517 303 ntBASIC3.68□□□□□ -1.82
P20040 Rap1gapos-201ENSMUST00000135358 471 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
P20040 Gm6969-201ENSMUST00000140065 342 ntBASIC3.68□□□□□ -1.82
P20040 Mir1946a-201ENSMUST00000158360 134 ntBASIC3.68□□□□□ -1.82
P20040 Gm22764-201ENSMUST00000158370 92 ntBASIC3.68□□□□□ -1.82
P20040 Spink10-206ENSMUST00000162511 684 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
P20040 Vmn1r174-201ENSMUST00000167551 942 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
P20040 Gm18415-201ENSMUST00000177464 647 ntBASIC3.68□□□□□ -1.82
P20040 Obox4-ps15-201ENSMUST00000178057 1140 ntBASIC3.68□□□□□ -1.82
P20040 Obox4-ps19-201ENSMUST00000178284 1140 ntBASIC3.68□□□□□ -1.82
P20040 Gm8807-201ENSMUST00000179328 492 ntBASIC3.68□□□□□ -1.82
P20040 Obox4-ps20-201ENSMUST00000179591 1140 ntBASIC3.68□□□□□ -1.82
P20040 Obox4-ps21-201ENSMUST00000179856 1140 ntBASIC3.68□□□□□ -1.82
P20040 Rpl31-ps24-201ENSMUST00000181350 379 ntBASIC3.68□□□□□ -1.82
P20040 Snhg14-202ENSMUST00000185693 734 ntTSL 5 BASIC3.68□□□□□ -1.82
P20040 Gm29563-201ENSMUST00000187249 496 ntBASIC3.68□□□□□ -1.82
P20040 Galntl6-205ENSMUST00000188531 1056 ntTSL 5 BASIC3.68□□□□□ -1.82
P20040 Scgb2b9-ps-201ENSMUST00000189522 334 ntBASIC3.68□□□□□ -1.82
P20040 Gm5309-201ENSMUST00000197416 677 ntBASIC3.68□□□□□ -1.82
P20040 Gm5885-202ENSMUST00000203357 528 ntBASIC3.68□□□□□ -1.82
P20040 Gm44002-201ENSMUST00000205134 594 ntBASIC3.68□□□□□ -1.82
P20040 Gm45209-201ENSMUST00000207122 353 ntBASIC3.68□□□□□ -1.82
P20040 Gm3690-201ENSMUST00000211341 262 ntBASIC3.68□□□□□ -1.82
P20040 Gm19134-201ENSMUST00000221203 487 ntBASIC3.68□□□□□ -1.82
P20040 AC154241.1-201ENSMUST00000223952 356 ntBASIC3.68□□□□□ -1.82
P20040 Vmn1r232-201ENSMUST00000077001 1159 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
P20040 Cdr1-201ENSMUST00000166381 2313 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
P20040 Gm4788-202ENSMUST00000111986 2935 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
P20040 Vmn2r77-201ENSMUST00000164996 2565 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
P20040 Gm37626-201ENSMUST00000194332 4563 ntBASIC3.68□□□□□ -1.82
P20040 Themis-202ENSMUST00000060409 2278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
P20040 Vmn1r210-202ENSMUST00000226180 3116 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
P20040 Cubn-201ENSMUST00000091436 11262 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
P20040 Zfp984-202ENSMUST00000122309 2405 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
P20040 Vmn2r100-201ENSMUST00000166081 2553 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
P20040 Olfr1317-203ENSMUST00000214801 2578 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
P20040 Btbd35f10-201ENSMUST00000178621 1952 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
P20040 Gm38260-201ENSMUST00000193573 3995 ntBASIC3.67□□□□□ -1.82
P20040 Zfp595-201ENSMUST00000109735 3896 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
P20040 Rnf128-202ENSMUST00000113027 2641 ntTSL 5 BASIC3.67□□□□□ -1.82
P20040 Trbv19-201ENSMUST00000103276 566 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
P20040 Gm9432-201ENSMUST00000117810 759 ntBASIC3.67□□□□□ -1.82
P20040 Gm8757-201ENSMUST00000119660 372 ntBASIC3.67□□□□□ -1.82
P20040 Gm12884-201ENSMUST00000120371 325 ntBASIC3.67□□□□□ -1.82
P20040 Gm14908-201ENSMUST00000120930 1286 ntBASIC3.67□□□□□ -1.82
P20040 Gm2012-201ENSMUST00000121900 1131 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
P20040 Gm15885-201ENSMUST00000122114 388 ntBASIC3.67□□□□□ -1.82
P20040 Gm15962-201ENSMUST00000124184 750 ntTSL 3 BASIC3.67□□□□□ -1.82
P20040 9130015L21Rik-201ENSMUST00000140319 606 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
P20040 Gm25520-201ENSMUST00000158389 118 ntBASIC3.67□□□□□ -1.82
P20040 Gm16571-201ENSMUST00000159112 291 ntBASIC3.67□□□□□ -1.82
P20040 Gm25037-201ENSMUST00000175418 110 ntBASIC3.67□□□□□ -1.82
P20040 Vmn1r-ps48-201ENSMUST00000176352 886 ntBASIC3.67□□□□□ -1.82
P20040 Gm22395-201ENSMUST00000177427 96 ntBASIC3.67□□□□□ -1.82
P20040 Mir6960-201ENSMUST00000183449 61 ntBASIC3.67□□□□□ -1.82
P20040 1700027I24Rik-201ENSMUST00000183612 696 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
P20040 Mir7028-201ENSMUST00000185016 64 ntBASIC3.67□□□□□ -1.82
P20040 A930005H10Rik-202ENSMUST00000185424 433 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
P20040 Gm28709-201ENSMUST00000186967 456 ntTSL 5 BASIC3.67□□□□□ -1.82
P20040 Gm28612-201ENSMUST00000189214 416 ntTSL 5 BASIC3.67□□□□□ -1.82
P20040 Ms4a2-205ENSMUST00000189641 647 ntTSL 3 BASIC3.67□□□□□ -1.82
P20040 1700027A15Rik-205ENSMUST00000191122 332 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
P20040 Gm37857-201ENSMUST00000191784 1199 ntBASIC3.67□□□□□ -1.82
P20040 Gm37219-201ENSMUST00000192036 926 ntBASIC3.67□□□□□ -1.82
P20040 Gm31942-201ENSMUST00000192534 827 ntTSL 5 BASIC3.67□□□□□ -1.82
P20040 Gm17967-201ENSMUST00000195319 647 ntBASIC3.67□□□□□ -1.82
P20040 Csn1s2a-209ENSMUST00000200322 797 ntAPPRIS ALT2 TSL 2 BASIC3.67□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 73.4 ms