Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Gm21748-201ENSMUST00000179623 309 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
RaraP11416 Gm22621-201ENSMUST00000179678 74 ntBASIC6.01□□□□□ -1.45
RaraP11416 Gm10410-201ENSMUST00000180138 384 ntBASIC6.01□□□□□ -1.45
RaraP11416 Gm27796-201ENSMUST00000183863 261 ntBASIC6.01□□□□□ -1.45
RaraP11416 Gm27161-201ENSMUST00000183960 562 ntBASIC6.01□□□□□ -1.45
RaraP11416 Mir6481-201ENSMUST00000184617 110 ntBASIC6.01□□□□□ -1.45
RaraP11416 Gm27190-201ENSMUST00000184890 542 ntBASIC6.01□□□□□ -1.45
RaraP11416 Gm18505-201ENSMUST00000187360 790 ntBASIC6.01□□□□□ -1.45
RaraP11416 Gm37375-201ENSMUST00000193859 387 ntBASIC6.01□□□□□ -1.45
RaraP11416 Gm37385-201ENSMUST00000195223 387 ntBASIC6.01□□□□□ -1.45
RaraP11416 Mir6516-201ENSMUST00000196236 110 ntBASIC6.01□□□□□ -1.45
RaraP11416 Gm43798-201ENSMUST00000202056 394 ntBASIC6.01□□□□□ -1.45
RaraP11416 Gm18423-201ENSMUST00000205144 1074 ntBASIC6.01□□□□□ -1.45
RaraP11416 Gm44580-201ENSMUST00000206333 877 ntBASIC6.01□□□□□ -1.45
RaraP11416 Gm44516-201ENSMUST00000208794 833 ntTSL 5 BASIC6.01□□□□□ -1.45
RaraP11416 Gm18467-201ENSMUST00000208805 434 ntBASIC6.01□□□□□ -1.45
RaraP11416 Gm7706-202ENSMUST00000211278 590 ntTSL 3 BASIC6.01□□□□□ -1.45
RaraP11416 AC159821.1-201ENSMUST00000214934 248 ntTSL 3 BASIC6.01□□□□□ -1.45
RaraP11416 4930555G07Rik-202ENSMUST00000219879 750 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
RaraP11416 AC155922.1-201ENSMUST00000220100 373 ntBASIC6.01□□□□□ -1.45
RaraP11416 AC126554.2-201ENSMUST00000223259 400 ntBASIC6.01□□□□□ -1.45
RaraP11416 AC154640.2-201ENSMUST00000226324 472 ntBASIC6.01□□□□□ -1.45
RaraP11416 U90926-201ENSMUST00000031356 520 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
RaraP11416 Olfr690-201ENSMUST00000061920 1062 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
RaraP11416 Gm43282-201ENSMUST00000201848 2157 ntBASIC6.01□□□□□ -1.45
RaraP11416 Olfr430-202ENSMUST00000213425 3873 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
RaraP11416 Slc22a29-201ENSMUST00000113298 2271 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
RaraP11416 Vmn2r2-202ENSMUST00000177151 2727 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
RaraP11416 Atf2-207ENSMUST00000112017 2396 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
RaraP11416 4930503L19Rik-204ENSMUST00000212155 1585 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
RaraP11416 Olfr448-202ENSMUST00000213952 3024 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
RaraP11416 Olfr303-205ENSMUST00000216409 4106 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
RaraP11416 AC120375.2-201ENSMUST00000226532 1853 ntBASIC6□□□□□ -1.45
RaraP11416 Ncoa7-203ENSMUST00000213836 2989 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
RaraP11416 Olfr1215-203ENSMUST00000216271 2608 ntAPPRIS P1 TSL 3 BASIC6□□□□□ -1.45
RaraP11416 Gm42600-201ENSMUST00000202081 3588 ntBASIC6□□□□□ -1.45
RaraP11416 Mtx3-201ENSMUST00000076169 6275 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
RaraP11416 Map2-201ENSMUST00000024639 5195 ntTSL 5 BASIC6□□□□□ -1.45
RaraP11416 Zfp78-204ENSMUST00000207347 3883 ntAPPRIS P4 TSL 1 (best) BASIC6□□□□□ -1.45
RaraP11416 Gm15177-201ENSMUST00000120491 577 ntBASIC6□□□□□ -1.45
RaraP11416 Gm12924-201ENSMUST00000121747 318 ntBASIC6□□□□□ -1.45
RaraP11416 Crem-206ENSMUST00000124747 973 ntTSL 2 BASIC6□□□□□ -1.45
RaraP11416 Gm14216-201ENSMUST00000136046 409 ntTSL 3 BASIC6□□□□□ -1.45
RaraP11416 Gm23124-201ENSMUST00000157650 107 ntBASIC6□□□□□ -1.45
RaraP11416 Gm23995-201ENSMUST00000158060 129 ntBASIC6□□□□□ -1.45
RaraP11416 Gm15900-201ENSMUST00000161584 342 ntBASIC6□□□□□ -1.45
RaraP11416 Gm17081-201ENSMUST00000167363 478 ntBASIC6□□□□□ -1.45
RaraP11416 Tspy-ps-202ENSMUST00000172304 321 ntTSL 1 (best) BASIC6□□□□□ -1.45
RaraP11416 Gm23806-201ENSMUST00000175157 109 ntBASIC6□□□□□ -1.45
RaraP11416 AU023070-201ENSMUST00000176972 387 ntTSL 2 BASIC6□□□□□ -1.45
RaraP11416 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
RaraP11416 Gm27679-201ENSMUST00000184612 84 ntBASIC6□□□□□ -1.45
RaraP11416 Snurf-201ENSMUST00000194059 216 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
RaraP11416 Gm38008-201ENSMUST00000195333 518 ntBASIC6□□□□□ -1.45
RaraP11416 Gm8953-201ENSMUST00000198497 904 ntTSL 5 BASIC6□□□□□ -1.45
RaraP11416 Gm43083-201ENSMUST00000199594 476 ntBASIC6□□□□□ -1.45
RaraP11416 Pomp-203ENSMUST00000201376 383 ntTSL 3 BASIC6□□□□□ -1.45
RaraP11416 Gm19060-201ENSMUST00000201959 421 ntBASIC6□□□□□ -1.45
RaraP11416 1700019F05Rik-201ENSMUST00000202487 533 ntTSL 1 (best) BASIC6□□□□□ -1.45
RaraP11416 Gm19761-201ENSMUST00000205372 391 ntBASIC6□□□□□ -1.45
RaraP11416 Gm29521-203ENSMUST00000216148 805 ntTSL 5 BASIC6□□□□□ -1.45
RaraP11416 AC133650.1-201ENSMUST00000217243 578 ntBASIC6□□□□□ -1.45
RaraP11416 AC153141.1-201ENSMUST00000218636 501 ntBASIC6□□□□□ -1.45
RaraP11416 CT025616.1-201ENSMUST00000221158 412 ntBASIC6□□□□□ -1.45
RaraP11416 Tmed10-203ENSMUST00000222585 619 ntTSL 3 BASIC6□□□□□ -1.45
RaraP11416 AC165347.1-201ENSMUST00000224089 1025 ntBASIC6□□□□□ -1.45
RaraP11416 AL606513.1-201ENSMUST00000225369 579 ntBASIC6□□□□□ -1.45
RaraP11416 AC109172.1-201ENSMUST00000227503 187 ntBASIC6□□□□□ -1.45
RaraP11416 Glod5-201ENSMUST00000033503 673 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
RaraP11416 5430402E10Rik-201ENSMUST00000063127 798 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
RaraP11416 Olfr575-201ENSMUST00000084812 957 ntBASIC6□□□□□ -1.45
RaraP11416 Gm4017-201ENSMUST00000084813 338 ntBASIC6□□□□□ -1.45
RaraP11416 Smcp-201ENSMUST00000098888 861 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
RaraP11416 Lingo2-210ENSMUST00000164772 3562 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
RaraP11416 Abcb7-201ENSMUST00000033695 5667 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
RaraP11416 Gm38451-201ENSMUST00000208329 2646 ntBASIC6□□□□□ -1.45
RaraP11416 Gabra3-202ENSMUST00000114554 1790 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
RaraP11416 AL670757.1-201ENSMUST00000223668 1959 ntBASIC6□□□□□ -1.45
RaraP11416 Gm21955-201ENSMUST00000194137 4968 ntBASIC6□□□□□ -1.45
RaraP11416 Gm8980-201ENSMUST00000140232 2197 ntBASIC6□□□□□ -1.45
RaraP11416 Orc3-202ENSMUST00000108142 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
RaraP11416 Atad2-208ENSMUST00000228783 3472 ntAPPRIS ALT2 BASIC6□□□□□ -1.45
RaraP11416 Alkbh8-204ENSMUST00000211933 7674 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
RaraP11416 Usp29-203ENSMUST00000198068 4420 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
RaraP11416 Olfr55-203ENSMUST00000214891 4428 ntTSL 5 BASIC5.99□□□□□ -1.45
RaraP11416 Emsy-202ENSMUST00000205276 7693 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
RaraP11416 Pum2-210ENSMUST00000169089 3295 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
RaraP11416 Olfr721-ps1-203ENSMUST00000215479 3075 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
RaraP11416 Vmn2r103-201ENSMUST00000172203 2571 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
RaraP11416 Gm29293-201ENSMUST00000189416 2188 ntBASIC5.99□□□□□ -1.45
RaraP11416 Gm35585-201ENSMUST00000195996 1570 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
RaraP11416 Gm8979-201ENSMUST00000183386 7296 ntBASIC5.99□□□□□ -1.45
RaraP11416 Mir92b-201ENSMUST00000102300 83 ntBASIC5.99□□□□□ -1.45
RaraP11416 Tcrg-C2-201ENSMUST00000103561 914 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
RaraP11416 S100a9-202ENSMUST00000117167 519 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RaraP11416 Gm16106-201ENSMUST00000119187 294 ntBASIC5.99□□□□□ -1.45
RaraP11416 Defb44-ps-201ENSMUST00000126871 219 ntBASIC5.99□□□□□ -1.45
RaraP11416 Gm11861-201ENSMUST00000141571 382 ntTSL 3 BASIC5.99□□□□□ -1.45
RaraP11416 Gm15340-201ENSMUST00000144984 704 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
RaraP11416 1700109G15Rik-201ENSMUST00000150735 384 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 117.2 ms