Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Mir20a-201ENSMUST00000083508 107 ntBASIC4.48□□□□□ -1.69
Lire1P11260 Mir338-201ENSMUST00000083666 98 ntBASIC4.48□□□□□ -1.69
Lire1P11260 Mir199a-2-201ENSMUST00000093618 110 ntBASIC4.48□□□□□ -1.69
Lire1P11260 n-R5s13-201ENSMUST00000093707 119 ntBASIC4.48□□□□□ -1.69
Lire1P11260 Ccl26-201ENSMUST00000094226 282 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Lire1P11260 Cp-205ENSMUST00000108329 4564 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
Lire1P11260 Nebl-202ENSMUST00000124270 8079 ntTSL 5 BASIC4.48□□□□□ -1.69
Lire1P11260 Gm15679-201ENSMUST00000161244 1936 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Lire1P11260 Vmn1r45-203ENSMUST00000227122 2861 ntBASIC4.47□□□□□ -1.69
Lire1P11260 Gm28183-201ENSMUST00000191321 1406 ntTSL 5 BASIC4.47□□□□□ -1.69
Lire1P11260 Gm37204-201ENSMUST00000192389 3961 ntBASIC4.47□□□□□ -1.69
Lire1P11260 Olfr1043-204ENSMUST00000216028 1824 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Lire1P11260 Mga-204ENSMUST00000110774 13931 ntAPPRIS P3 TSL 5 BASIC4.47□□□□□ -1.69
Lire1P11260 Rbbp8-202ENSMUST00000115861 3523 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Lire1P11260 Jmjd1c-206ENSMUST00000173689 8609 ntAPPRIS ALT2 TSL 2 BASIC4.47□□□□□ -1.69
Lire1P11260 Gm16400-201ENSMUST00000116523 1029 ntBASIC4.47□□□□□ -1.69
Lire1P11260 Gm13491-201ENSMUST00000118267 235 ntBASIC4.47□□□□□ -1.69
Lire1P11260 Mup-ps18-201ENSMUST00000120145 531 ntBASIC4.47□□□□□ -1.69
Lire1P11260 Gm12105-201ENSMUST00000120846 779 ntBASIC4.47□□□□□ -1.69
Lire1P11260 Gm12007-201ENSMUST00000120978 597 ntBASIC4.47□□□□□ -1.69
Lire1P11260 Gm13131-201ENSMUST00000122228 321 ntBASIC4.47□□□□□ -1.69
Lire1P11260 AI847159-202ENSMUST00000138431 952 ntTSL 2 BASIC4.47□□□□□ -1.69
Lire1P11260 Gm14011-201ENSMUST00000145178 302 ntTSL 2 BASIC4.47□□□□□ -1.69
Lire1P11260 Prlr-212ENSMUST00000148257 1190 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
Lire1P11260 Gm8902-201ENSMUST00000174341 1096 ntBASIC4.47□□□□□ -1.69
Lire1P11260 Tex50-202ENSMUST00000178511 954 ntAPPRIS P1 TSL 3 BASIC4.47□□□□□ -1.69
Lire1P11260 Gm5511-201ENSMUST00000189380 802 ntBASIC4.47□□□□□ -1.69
Lire1P11260 Gm28155-201ENSMUST00000191066 151 ntBASIC4.47□□□□□ -1.69
Lire1P11260 Gm4734-201ENSMUST00000200117 777 ntBASIC4.47□□□□□ -1.69
Lire1P11260 Gm32308-201ENSMUST00000203053 280 ntBASIC4.47□□□□□ -1.69
Lire1P11260 Gm5322-201ENSMUST00000206142 699 ntBASIC4.47□□□□□ -1.69
Lire1P11260 Olfr494-201ENSMUST00000209743 1002 ntAPPRIS P1 TSL 3 BASIC4.47□□□□□ -1.69
Lire1P11260 CT030194.1-201ENSMUST00000225507 532 ntBASIC4.47□□□□□ -1.69
Lire1P11260 AC112142.1-206ENSMUST00000228136 982 ntBASIC4.47□□□□□ -1.69
Lire1P11260 Vmn1r39-206ENSMUST00000228651 2144 ntAPPRIS ALT2 BASIC4.47□□□□□ -1.69
Lire1P11260 Spata19-201ENSMUST00000034473 697 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
Lire1P11260 Gm24611-201ENSMUST00000083272 107 ntBASIC4.47□□□□□ -1.69
Lire1P11260 n-R5s170-201ENSMUST00000083726 113 ntBASIC4.47□□□□□ -1.69
Lire1P11260 Scml2-203ENSMUST00000077375 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
Lire1P11260 Olfr716-207ENSMUST00000216871 4062 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Lire1P11260 Mysm1-201ENSMUST00000075872 7420 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Lire1P11260 Rps6ka3-204ENSMUST00000112493 3671 ntTSL 5 BASIC4.47□□□□□ -1.69
Lire1P11260 Vmn1r46-202ENSMUST00000205088 10770 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.69
Lire1P11260 Ano5-201ENSMUST00000043944 7785 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
Lire1P11260 Ank2-208ENSMUST00000182078 14305 ntAPPRIS P2 TSL 5 BASIC4.46□□□□□ -1.69
Lire1P11260 Gm42842-201ENSMUST00000197736 3004 ntBASIC4.46□□□□□ -1.69
Lire1P11260 AC113059.2-201ENSMUST00000213462 3016 ntBASIC4.46□□□□□ -1.69
Lire1P11260 Gm35835-202ENSMUST00000216984 3350 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Lire1P11260 Rbbp6-203ENSMUST00000098062 6345 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Lire1P11260 Vmn1r21-202ENSMUST00000203488 1673 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
Lire1P11260 Gm28832-201ENSMUST00000188603 1498 ntTSL 5 BASIC4.46□□□□□ -1.7
Lire1P11260 Olfr726-206ENSMUST00000217025 1363 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Lire1P11260 Gm25096-201ENSMUST00000104043 129 ntBASIC4.46□□□□□ -1.7
Lire1P11260 Gm26143-201ENSMUST00000104480 108 ntBASIC4.46□□□□□ -1.7
Lire1P11260 Gm11633-201ENSMUST00000118176 444 ntBASIC4.46□□□□□ -1.7
Lire1P11260 Gm13452-201ENSMUST00000120896 1097 ntBASIC4.46□□□□□ -1.7
Lire1P11260 Gm12466-201ENSMUST00000121199 620 ntBASIC4.46□□□□□ -1.7
Lire1P11260 Gm15905-201ENSMUST00000137042 298 ntBASIC4.46□□□□□ -1.7
Lire1P11260 Gm13617-201ENSMUST00000155350 675 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Lire1P11260 Gm23167-201ENSMUST00000157155 103 ntBASIC4.46□□□□□ -1.7
Lire1P11260 Gm25278-201ENSMUST00000157267 120 ntBASIC4.46□□□□□ -1.7
Lire1P11260 Gm26487-201ENSMUST00000158022 94 ntBASIC4.46□□□□□ -1.7
Lire1P11260 Gm20468-201ENSMUST00000172664 452 ntTSL 3 BASIC4.46□□□□□ -1.7
Lire1P11260 Gm16451-201ENSMUST00000173484 924 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Lire1P11260 Gm16378-201ENSMUST00000179168 342 ntBASIC4.46□□□□□ -1.7
Lire1P11260 Gm27535-201ENSMUST00000183814 157 ntBASIC4.46□□□□□ -1.7
Lire1P11260 Gm8197-201ENSMUST00000192906 363 ntTSL 5 BASIC4.46□□□□□ -1.7
Lire1P11260 Gm38011-201ENSMUST00000193312 279 ntBASIC4.46□□□□□ -1.7
Lire1P11260 Gm18382-201ENSMUST00000194394 582 ntBASIC4.46□□□□□ -1.7
Lire1P11260 Gm19617-201ENSMUST00000202977 308 ntBASIC4.46□□□□□ -1.7
Lire1P11260 Gm44686-201ENSMUST00000206776 540 ntTSL 3 BASIC4.46□□□□□ -1.7
Lire1P11260 Gm19366-201ENSMUST00000206996 156 ntBASIC4.46□□□□□ -1.7
Lire1P11260 Gm8423-201ENSMUST00000211387 607 ntBASIC4.46□□□□□ -1.7
Lire1P11260 Gm45409-201ENSMUST00000211486 252 ntBASIC4.46□□□□□ -1.7
Lire1P11260 AC164087.1-201ENSMUST00000215174 733 ntTSL 3 BASIC4.46□□□□□ -1.7
Lire1P11260 AC126043.1-201ENSMUST00000221304 1141 ntBASIC4.46□□□□□ -1.7
Lire1P11260 AC102575.1-201ENSMUST00000225348 547 ntBASIC4.46□□□□□ -1.7
Lire1P11260 Gm16442-201ENSMUST00000079099 924 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Lire1P11260 Gm22245-201ENSMUST00000082479 103 ntBASIC4.46□□□□□ -1.7
Lire1P11260 Olfr206-201ENSMUST00000084791 1005 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Lire1P11260 Gm43201-201ENSMUST00000195925 3416 ntBASIC4.46□□□□□ -1.7
Lire1P11260 2810428J06Rik-201ENSMUST00000198336 2696 ntBASIC4.46□□□□□ -1.7
Lire1P11260 Olfr887-202ENSMUST00000212502 6281 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Lire1P11260 Tsga10-204ENSMUST00000123082 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
Lire1P11260 Gm28634-201ENSMUST00000191087 2613 ntBASIC4.45□□□□□ -1.7
Lire1P11260 Olfr1009-203ENSMUST00000216443 4047 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Lire1P11260 Gm8104-201ENSMUST00000168165 1761 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Lire1P11260 Btbd35f12-201ENSMUST00000178827 1908 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Lire1P11260 Fbxo48-202ENSMUST00000109635 1098 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Lire1P11260 Gm14560-201ENSMUST00000118672 375 ntBASIC4.45□□□□□ -1.7
Lire1P11260 Gm13172-201ENSMUST00000118685 256 ntBASIC4.45□□□□□ -1.7
Lire1P11260 Gm12358-201ENSMUST00000121842 520 ntBASIC4.45□□□□□ -1.7
Lire1P11260 Gm16189-201ENSMUST00000123707 997 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Lire1P11260 1700061F12Rik-201ENSMUST00000132414 876 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Lire1P11260 Gm25907-201ENSMUST00000158486 125 ntBASIC4.45□□□□□ -1.7
Lire1P11260 D6Ertd474e-203ENSMUST00000160188 683 ntTSL 3 BASIC4.45□□□□□ -1.7
Lire1P11260 Gm20456-201ENSMUST00000174690 385 ntTSL 5 BASIC4.45□□□□□ -1.7
Lire1P11260 Vmn1r-ps22-201ENSMUST00000176017 900 ntBASIC4.45□□□□□ -1.7
Lire1P11260 Rian-217ENSMUST00000183266 687 ntTSL 3 BASIC4.45□□□□□ -1.7
Lire1P11260 Gm27875-201ENSMUST00000184425 123 ntBASIC4.45□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms