Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Gm43853-201ENSMUST00000197162 301 ntBASIC4.34□□□□□ -1.71
Chmp6P0C0A3 Gm42451-201ENSMUST00000197410 244 ntBASIC4.34□□□□□ -1.71
Chmp6P0C0A3 Gm8820-201ENSMUST00000204077 571 ntBASIC4.34□□□□□ -1.71
Chmp6P0C0A3 Gm44784-201ENSMUST00000207396 460 ntTSL 5 BASIC4.34□□□□□ -1.71
Chmp6P0C0A3 Gm35325-201ENSMUST00000208979 771 ntTSL 2 BASIC4.34□□□□□ -1.71
Chmp6P0C0A3 Gm6303-201ENSMUST00000210123 471 ntBASIC4.34□□□□□ -1.71
Chmp6P0C0A3 AC158641.1-201ENSMUST00000218933 229 ntBASIC4.34□□□□□ -1.71
Chmp6P0C0A3 Gm29774-201ENSMUST00000219270 436 ntBASIC4.34□□□□□ -1.71
Chmp6P0C0A3 AC165164.2-201ENSMUST00000220313 392 ntTSL 3 BASIC4.34□□□□□ -1.71
Chmp6P0C0A3 CU024892.1-201ENSMUST00000224869 515 ntBASIC4.34□□□□□ -1.71
Chmp6P0C0A3 Mir27a-201ENSMUST00000083510 87 ntBASIC4.34□□□□□ -1.71
Chmp6P0C0A3 Gm7195-201ENSMUST00000190869 1707 ntBASIC4.34□□□□□ -1.71
Chmp6P0C0A3 Gm8297-202ENSMUST00000171964 1759 ntAPPRIS P5 TSL 5 BASIC4.34□□□□□ -1.71
Chmp6P0C0A3 Sult6b1-204ENSMUST00000169544 2060 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Chmp6P0C0A3 Ugp2-202ENSMUST00000102875 2683 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
Chmp6P0C0A3 4931408C20Rik-201ENSMUST00000097801 4318 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Chmp6P0C0A3 Olfr112-205ENSMUST00000213274 3558 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Chmp6P0C0A3 9430025C20Rik-201ENSMUST00000068663 2115 ntBASIC4.33□□□□□ -1.72
Chmp6P0C0A3 BC002059-202ENSMUST00000190415 1964 ntTSL 2 BASIC4.33□□□□□ -1.72
Chmp6P0C0A3 Gm16294-201ENSMUST00000070382 1459 ntTSL 2 BASIC4.33□□□□□ -1.72
Chmp6P0C0A3 Nat1-201ENSMUST00000026677 1347 ntAPPRIS P2 BASIC4.33□□□□□ -1.72
Chmp6P0C0A3 Csnka2ip-201ENSMUST00000089279 1336 ntAPPRIS P2 BASIC4.33□□□□□ -1.72
Chmp6P0C0A3 Gm11385-201ENSMUST00000121513 570 ntBASIC4.33□□□□□ -1.72
Chmp6P0C0A3 Gm25432-201ENSMUST00000158284 66 ntBASIC4.33□□□□□ -1.72
Chmp6P0C0A3 Gm4222-201ENSMUST00000165784 470 ntBASIC4.33□□□□□ -1.72
Chmp6P0C0A3 Vmn1r-ps148-201ENSMUST00000176775 455 ntBASIC4.33□□□□□ -1.72
Chmp6P0C0A3 Gm3424-202ENSMUST00000178418 618 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
Chmp6P0C0A3 Gm8246-201ENSMUST00000179411 618 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
Chmp6P0C0A3 Gm27695-201ENSMUST00000184301 91 ntBASIC4.33□□□□□ -1.72
Chmp6P0C0A3 Gm28614-201ENSMUST00000186483 458 ntBASIC4.33□□□□□ -1.72
Chmp6P0C0A3 Gm28196-201ENSMUST00000187719 640 ntBASIC4.33□□□□□ -1.72
Chmp6P0C0A3 Gm28060-201ENSMUST00000191554 189 ntBASIC4.33□□□□□ -1.72
Chmp6P0C0A3 4930420N18Rik-201ENSMUST00000191831 676 ntBASIC4.33□□□□□ -1.72
Chmp6P0C0A3 Gm7449-201ENSMUST00000194393 663 ntBASIC4.33□□□□□ -1.72
Chmp6P0C0A3 Gm20559-201ENSMUST00000201032 433 ntTSL 3 BASIC4.33□□□□□ -1.72
Chmp6P0C0A3 Gm7468-201ENSMUST00000203900 652 ntBASIC4.33□□□□□ -1.72
Chmp6P0C0A3 Gm6230-201ENSMUST00000208077 780 ntBASIC4.33□□□□□ -1.72
Chmp6P0C0A3 Gm19269-201ENSMUST00000211401 804 ntBASIC4.33□□□□□ -1.72
Chmp6P0C0A3 Gm46998-201ENSMUST00000221444 330 ntBASIC4.33□□□□□ -1.72
Chmp6P0C0A3 AC167013.2-202ENSMUST00000227035 333 ntBASIC4.33□□□□□ -1.72
Chmp6P0C0A3 Gm23677-201ENSMUST00000083156 104 ntBASIC4.33□□□□□ -1.72
Chmp6P0C0A3 Tas2r115-201ENSMUST00000095394 1033 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Chmp6P0C0A3 Vmn1r49-203ENSMUST00000226368 6276 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Chmp6P0C0A3 Olfr1323-203ENSMUST00000213556 5431 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Chmp6P0C0A3 Ddx60-201ENSMUST00000070631 6535 ntAPPRIS P2 TSL 5 BASIC4.32□□□□□ -1.72
Chmp6P0C0A3 Gm5798-201ENSMUST00000164613 1751 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Chmp6P0C0A3 Gm37323-201ENSMUST00000195771 2773 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Chmp6P0C0A3 Gabra6-202ENSMUST00000109286 1554 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
Chmp6P0C0A3 4921515E04Rik-203ENSMUST00000227364 2309 ntBASIC4.32□□□□□ -1.72
Chmp6P0C0A3 Olfr992-203ENSMUST00000214895 2222 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
Chmp6P0C0A3 AC153522.2-201ENSMUST00000218389 3853 ntBASIC4.32□□□□□ -1.72
Chmp6P0C0A3 Igkv5-45-201ENSMUST00000103366 385 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Chmp6P0C0A3 Gm8475-201ENSMUST00000118211 526 ntBASIC4.32□□□□□ -1.72
Chmp6P0C0A3 Gm15313-201ENSMUST00000119179 282 ntBASIC4.32□□□□□ -1.72
Chmp6P0C0A3 Olfr1118-201ENSMUST00000121296 996 ntAPPRIS P2 BASIC4.32□□□□□ -1.72
Chmp6P0C0A3 Gm7618-201ENSMUST00000121643 171 ntBASIC4.32□□□□□ -1.72
Chmp6P0C0A3 Gm11579-201ENSMUST00000145502 845 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Chmp6P0C0A3 Gm24503-201ENSMUST00000158454 135 ntBASIC4.32□□□□□ -1.72
Chmp6P0C0A3 Gm26362-201ENSMUST00000158865 315 ntBASIC4.32□□□□□ -1.72
Chmp6P0C0A3 Gm16055-201ENSMUST00000161366 626 ntTSL 2 BASIC4.32□□□□□ -1.72
Chmp6P0C0A3 Gm21834-201ENSMUST00000178907 453 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Chmp6P0C0A3 Gm38201-201ENSMUST00000192143 387 ntBASIC4.32□□□□□ -1.72
Chmp6P0C0A3 Gm42500-201ENSMUST00000199898 517 ntTSL 3 BASIC4.32□□□□□ -1.72
Chmp6P0C0A3 Gm10988-201ENSMUST00000209150 1088 ntBASIC4.32□□□□□ -1.72
Chmp6P0C0A3 1700054O05Rik-201ENSMUST00000214107 555 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Chmp6P0C0A3 AC156504.1-201ENSMUST00000214608 157 ntBASIC4.32□□□□□ -1.72
Chmp6P0C0A3 CT010511.1-201ENSMUST00000224570 315 ntBASIC4.32□□□□□ -1.72
Chmp6P0C0A3 AC154738.1-201ENSMUST00000227054 368 ntBASIC4.32□□□□□ -1.72
Chmp6P0C0A3 Creg1-201ENSMUST00000040298 425 ntTSL 3 BASIC4.32□□□□□ -1.72
Chmp6P0C0A3 Olfr832-201ENSMUST00000060601 939 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Chmp6P0C0A3 Olfr996-201ENSMUST00000077075 1068 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Chmp6P0C0A3 Gm24917-201ENSMUST00000083935 104 ntBASIC4.32□□□□□ -1.72
Chmp6P0C0A3 Olfr834-201ENSMUST00000086492 939 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Chmp6P0C0A3 4932414N04Rik-201ENSMUST00000055930 3519 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Chmp6P0C0A3 Cnot6l-202ENSMUST00000113005 3170 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
Chmp6P0C0A3 Gm43443-201ENSMUST00000202337 2393 ntBASIC4.32□□□□□ -1.72
Chmp6P0C0A3 Gm4724-201ENSMUST00000109045 1659 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
Chmp6P0C0A3 Chrdl1-201ENSMUST00000063029 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
Chmp6P0C0A3 Gm14015-201ENSMUST00000130634 3949 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Chmp6P0C0A3 Olfr1477-201ENSMUST00000214274 3913 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Chmp6P0C0A3 Olfr955-203ENSMUST00000220176 1452 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Chmp6P0C0A3 Olfr875-202ENSMUST00000215128 2039 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Chmp6P0C0A3 Syne2-201ENSMUST00000044217 21690 ntAPPRIS P2 TSL 5 BASIC4.31□□□□□ -1.72
Chmp6P0C0A3 4930544M13Rik-202ENSMUST00000181553 1403 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Chmp6P0C0A3 Gm37478-201ENSMUST00000193624 3495 ntBASIC4.31□□□□□ -1.72
Chmp6P0C0A3 Ighv1-34-201ENSMUST00000103512 388 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Chmp6P0C0A3 Trav15-1-dv6-1-201ENSMUST00000103653 349 ntAPPRIS ALT2 BASIC4.31□□□□□ -1.72
Chmp6P0C0A3 Gm5757-201ENSMUST00000117494 528 ntBASIC4.31□□□□□ -1.72
Chmp6P0C0A3 Gm13607-201ENSMUST00000117875 539 ntBASIC4.31□□□□□ -1.72
Chmp6P0C0A3 Gm14875-201ENSMUST00000120881 319 ntBASIC4.31□□□□□ -1.72
Chmp6P0C0A3 Gm11281-201ENSMUST00000141391 576 ntBASIC4.31□□□□□ -1.72
Chmp6P0C0A3 Gm17155-201ENSMUST00000165969 473 ntBASIC4.31□□□□□ -1.72
Chmp6P0C0A3 Gm22398-201ENSMUST00000174941 125 ntBASIC4.31□□□□□ -1.72
Chmp6P0C0A3 Gm25731-201ENSMUST00000175167 125 ntBASIC4.31□□□□□ -1.72
Chmp6P0C0A3 Vmn1r23-201ENSMUST00000175817 997 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Chmp6P0C0A3 1700027I24Rik-201ENSMUST00000183612 696 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Chmp6P0C0A3 Gm11983-202ENSMUST00000184940 318 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Chmp6P0C0A3 1700121L16Rik-201ENSMUST00000189166 561 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Chmp6P0C0A3 Gm19280-201ENSMUST00000190191 205 ntBASIC4.31□□□□□ -1.72
Chmp6P0C0A3 Gm28877-201ENSMUST00000191349 604 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 74 ms