Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm27568-201ENSMUST00000184220 99 ntBASIC3.13□□□□□ -1.91
Hmgb3O54879 Gm28574-201ENSMUST00000185757 699 ntBASIC3.13□□□□□ -1.91
Hmgb3O54879 Gm28781-201ENSMUST00000185760 696 ntBASIC3.13□□□□□ -1.91
Hmgb3O54879 Gm28339-201ENSMUST00000185845 696 ntBASIC3.13□□□□□ -1.91
Hmgb3O54879 Gm29062-201ENSMUST00000186032 694 ntBASIC3.13□□□□□ -1.91
Hmgb3O54879 Gm29574-201ENSMUST00000186226 696 ntBASIC3.13□□□□□ -1.91
Hmgb3O54879 Gm28828-201ENSMUST00000186601 696 ntBASIC3.13□□□□□ -1.91
Hmgb3O54879 Gm28057-201ENSMUST00000186603 615 ntBASIC3.13□□□□□ -1.91
Hmgb3O54879 Gm28255-201ENSMUST00000187101 694 ntBASIC3.13□□□□□ -1.91
Hmgb3O54879 Gm29307-201ENSMUST00000187367 696 ntBASIC3.13□□□□□ -1.91
Hmgb3O54879 Gm28397-201ENSMUST00000187970 699 ntBASIC3.13□□□□□ -1.91
Hmgb3O54879 Gm28896-201ENSMUST00000188609 696 ntBASIC3.13□□□□□ -1.91
Hmgb3O54879 Gm29545-201ENSMUST00000188878 694 ntBASIC3.13□□□□□ -1.91
Hmgb3O54879 Gm29196-201ENSMUST00000189239 618 ntBASIC3.13□□□□□ -1.91
Hmgb3O54879 Gm29339-201ENSMUST00000189613 696 ntBASIC3.13□□□□□ -1.91
Hmgb3O54879 Gm28159-201ENSMUST00000190296 696 ntBASIC3.13□□□□□ -1.91
Hmgb3O54879 Gm29366-201ENSMUST00000190481 699 ntBASIC3.13□□□□□ -1.91
Hmgb3O54879 Gm29407-201ENSMUST00000191468 696 ntBASIC3.13□□□□□ -1.91
Hmgb3O54879 Gm37433-201ENSMUST00000192695 678 ntBASIC3.13□□□□□ -1.91
Hmgb3O54879 Gm37898-201ENSMUST00000193781 174 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Hmgb3O54879 Gm37441-201ENSMUST00000194430 678 ntBASIC3.13□□□□□ -1.91
Hmgb3O54879 Gm38107-201ENSMUST00000194873 696 ntBASIC3.13□□□□□ -1.91
Hmgb3O54879 Gm32780-201ENSMUST00000201402 540 ntTSL 3 BASIC3.13□□□□□ -1.91
Hmgb3O54879 Gm8035-201ENSMUST00000204625 687 ntBASIC3.13□□□□□ -1.91
Hmgb3O54879 Cyp2b26-ps-201ENSMUST00000206238 1090 ntBASIC3.13□□□□□ -1.91
Hmgb3O54879 Gm7587-201ENSMUST00000207618 1021 ntBASIC3.13□□□□□ -1.91
Hmgb3O54879 Znrd1as-204ENSMUST00000209623 1218 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
Hmgb3O54879 Gm45651-201ENSMUST00000210857 335 ntBASIC3.13□□□□□ -1.91
Hmgb3O54879 AC138330.1-201ENSMUST00000220690 1127 ntTSL 5 BASIC3.13□□□□□ -1.91
Hmgb3O54879 CR974429.1-201ENSMUST00000220877 827 ntBASIC3.13□□□□□ -1.91
Hmgb3O54879 Gm18441-201ENSMUST00000223539 617 ntBASIC3.13□□□□□ -1.91
Hmgb3O54879 Gm28044-201ENSMUST00000044819 551 ntAPPRIS P1 TSL 3 BASIC3.13□□□□□ -1.91
Hmgb3O54879 Gm24919-201ENSMUST00000083020 106 ntBASIC3.13□□□□□ -1.91
Hmgb3O54879 Mir129-2-201ENSMUST00000083577 90 ntBASIC3.13□□□□□ -1.91
Hmgb3O54879 Ccdc144b-201ENSMUST00000166644 1685 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Hmgb3O54879 Olfr1446-203ENSMUST00000216805 2417 ntAPPRIS P1 TSL 3 BASIC3.13□□□□□ -1.91
Hmgb3O54879 Cdc27-203ENSMUST00000106962 3160 ntTSL 5 BASIC3.13□□□□□ -1.91
Hmgb3O54879 Wdr49-203ENSMUST00000204341 1344 ntTSL 5 BASIC3.13□□□□□ -1.91
Hmgb3O54879 Olfr1093-203ENSMUST00000219561 2124 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Hmgb3O54879 Olfr699-202ENSMUST00000215952 3669 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Hmgb3O54879 Calcrl-202ENSMUST00000099944 3973 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Hmgb3O54879 2310057J18Rik-202ENSMUST00000140558 1445 ntTSL 5 BASIC3.12□□□□□ -1.91
Hmgb3O54879 Nlrp4b-201ENSMUST00000047809 3274 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Hmgb3O54879 Tom1l1-201ENSMUST00000020849 4308 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Hmgb3O54879 Vmn1r71-208ENSMUST00000228374 3717 ntAPPRIS P2 BASIC3.12□□□□□ -1.91
Hmgb3O54879 Cntn6-202ENSMUST00000161070 3515 ntTSL 5 BASIC3.12□□□□□ -1.91
Hmgb3O54879 Olfr510-203ENSMUST00000216331 3101 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Hmgb3O54879 Serpina7-201ENSMUST00000033626 2330 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Hmgb3O54879 Gm25919-201ENSMUST00000104271 132 ntBASIC3.12□□□□□ -1.91
Hmgb3O54879 Gm24160-201ENSMUST00000104594 126 ntBASIC3.12□□□□□ -1.91
Hmgb3O54879 Gm3443-201ENSMUST00000112772 285 ntAPPRIS P1 TSL 3 BASIC3.12□□□□□ -1.91
Hmgb3O54879 Gm15333-201ENSMUST00000118825 364 ntBASIC3.12□□□□□ -1.91
Hmgb3O54879 Olfr1118-201ENSMUST00000121296 996 ntAPPRIS P2 BASIC3.12□□□□□ -1.91
Hmgb3O54879 Gm26476-201ENSMUST00000122618 313 ntBASIC3.12□□□□□ -1.91
Hmgb3O54879 Gm23465-201ENSMUST00000157134 262 ntBASIC3.12□□□□□ -1.91
Hmgb3O54879 Gm23905-201ENSMUST00000157568 109 ntBASIC3.12□□□□□ -1.91
Hmgb3O54879 Gm26036-201ENSMUST00000158149 144 ntBASIC3.12□□□□□ -1.91
Hmgb3O54879 Cst12-202ENSMUST00000168443 546 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
Hmgb3O54879 Gm11983-202ENSMUST00000184940 318 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Hmgb3O54879 Mrgprc4-ps-201ENSMUST00000186018 964 ntBASIC3.12□□□□□ -1.91
Hmgb3O54879 Gm8641-201ENSMUST00000186995 826 ntBASIC3.12□□□□□ -1.91
Hmgb3O54879 Gm37640-201ENSMUST00000195407 300 ntTSL 3 BASIC3.12□□□□□ -1.91
Hmgb3O54879 Gm37134-201ENSMUST00000195810 628 ntTSL 3 BASIC3.12□□□□□ -1.91
Hmgb3O54879 Gm43084-201ENSMUST00000200696 947 ntBASIC3.12□□□□□ -1.91
Hmgb3O54879 Olfr27-201ENSMUST00000214052 1076 ntAPPRIS P1 TSL 3 BASIC3.12□□□□□ -1.91
Hmgb3O54879 Gm19073-201ENSMUST00000219978 555 ntBASIC3.12□□□□□ -1.91
Hmgb3O54879 AC121804.1-201ENSMUST00000221016 394 ntBASIC3.12□□□□□ -1.91
Hmgb3O54879 Gm7045-201ENSMUST00000221466 605 ntBASIC3.12□□□□□ -1.91
Hmgb3O54879 AC133598.4-202ENSMUST00000225267 469 ntBASIC3.12□□□□□ -1.91
Hmgb3O54879 CT030194.1-201ENSMUST00000225507 532 ntBASIC3.12□□□□□ -1.91
Hmgb3O54879 CT030662.3-201ENSMUST00000228751 476 ntBASIC3.12□□□□□ -1.91
Hmgb3O54879 Olfr357-201ENSMUST00000069578 1092 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Hmgb3O54879 Olfr294-201ENSMUST00000078588 1008 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Hmgb3O54879 Olfr1051-201ENSMUST00000099898 927 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Hmgb3O54879 Vmn2r100-201ENSMUST00000166081 2553 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Hmgb3O54879 Gm43886-201ENSMUST00000205039 2386 ntBASIC3.12□□□□□ -1.91
Hmgb3O54879 Olfr1137-202ENSMUST00000214209 3073 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Hmgb3O54879 Olfr263-202ENSMUST00000215804 3963 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Hmgb3O54879 Olfr918-202ENSMUST00000215461 3783 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
Hmgb3O54879 Olfr1009-203ENSMUST00000216443 4047 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Hmgb3O54879 Vmn2r-ps43-201ENSMUST00000173798 2473 ntBASIC3.12□□□□□ -1.91
Hmgb3O54879 Olfr1469-202ENSMUST00000216910 4106 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Hmgb3O54879 Gm6639-202ENSMUST00000196841 2666 ntTSL 5 BASIC3.11□□□□□ -1.91
Hmgb3O54879 Gm10488-201ENSMUST00000101657 874 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Hmgb3O54879 Gm5935-201ENSMUST00000101667 875 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Hmgb3O54879 Gm23608-201ENSMUST00000104545 128 ntBASIC3.11□□□□□ -1.91
Hmgb3O54879 Gm23879-201ENSMUST00000116874 126 ntBASIC3.11□□□□□ -1.91
Hmgb3O54879 Gm11718-201ENSMUST00000119942 537 ntBASIC3.11□□□□□ -1.91
Hmgb3O54879 Gm11510-201ENSMUST00000120278 347 ntBASIC3.11□□□□□ -1.91
Hmgb3O54879 8030453O22Rik-201ENSMUST00000128919 370 ntTSL 3 BASIC3.11□□□□□ -1.91
Hmgb3O54879 Gm2892-201ENSMUST00000145537 711 ntBASIC3.11□□□□□ -1.91
Hmgb3O54879 Gm22519-201ENSMUST00000158270 178 ntBASIC3.11□□□□□ -1.91
Hmgb3O54879 Vmn1r166-201ENSMUST00000164045 921 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Hmgb3O54879 Gm8453-201ENSMUST00000167253 921 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Hmgb3O54879 Gm4498-201ENSMUST00000168580 921 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Hmgb3O54879 Vmn1r113-201ENSMUST00000168794 894 ntTSL 5 BASIC3.11□□□□□ -1.91
Hmgb3O54879 Vmn1r118-201ENSMUST00000172322 921 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Hmgb3O54879 Gm20397-201ENSMUST00000174520 362 ntBASIC3.11□□□□□ -1.91
Hmgb3O54879 Mir5106-201ENSMUST00000174936 73 ntBASIC3.11□□□□□ -1.91
Hmgb3O54879 Gm22398-201ENSMUST00000174941 125 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms