Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Dync2h1-206ENSMUST00000147193 13103 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
Srp54bE9PXC0 Gm37527-201ENSMUST00000192406 3547 ntBASIC4.31□□□□□ -1.72
Srp54bE9PXC0 Gm32061-201ENSMUST00000207232 3478 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Srp54bE9PXC0 Gm29114-201ENSMUST00000187100 2508 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Srp54bE9PXC0 Gm43605-201ENSMUST00000199663 3426 ntBASIC4.31□□□□□ -1.72
Srp54bE9PXC0 Ncoa7-207ENSMUST00000215740 7043 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
Srp54bE9PXC0 Olfr1196-202ENSMUST00000216928 4270 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Srp54bE9PXC0 AC091683.1-201ENSMUST00000222307 2446 ntBASIC4.31□□□□□ -1.72
Srp54bE9PXC0 Olfr1052-202ENSMUST00000215090 1526 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Srp54bE9PXC0 Cmah-206ENSMUST00000167746 9727 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Srp54bE9PXC0 Gm28168-201ENSMUST00000191265 2630 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Srp54bE9PXC0 Gm2396-202ENSMUST00000188232 3433 ntTSL 5 BASIC4.3□□□□□ -1.72
Srp54bE9PXC0 Cntn6-201ENSMUST00000089215 3702 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Srp54bE9PXC0 Cybb-201ENSMUST00000015484 4752 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Srp54bE9PXC0 Skint3-201ENSMUST00000038455 3627 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
Srp54bE9PXC0 Fbxw28-204ENSMUST00000200156 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
Srp54bE9PXC0 AC144772.3-201ENSMUST00000228829 3126 ntBASIC4.3□□□□□ -1.72
Srp54bE9PXC0 Snora64-201ENSMUST00000104521 134 ntBASIC4.3□□□□□ -1.72
Srp54bE9PXC0 Gm13550-201ENSMUST00000118185 525 ntBASIC4.3□□□□□ -1.72
Srp54bE9PXC0 Gm14037-201ENSMUST00000120576 313 ntBASIC4.3□□□□□ -1.72
Srp54bE9PXC0 4930406D18Rik-202ENSMUST00000152827 657 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Srp54bE9PXC0 Gm16064-201ENSMUST00000154997 464 ntTSL 2 BASIC4.3□□□□□ -1.72
Srp54bE9PXC0 Gm22601-201ENSMUST00000157595 250 ntBASIC4.3□□□□□ -1.72
Srp54bE9PXC0 Gm15795-201ENSMUST00000160969 553 ntBASIC4.3□□□□□ -1.72
Srp54bE9PXC0 Gm8902-201ENSMUST00000174341 1096 ntBASIC4.3□□□□□ -1.72
Srp54bE9PXC0 Vmn2r-ps74-201ENSMUST00000174705 917 ntBASIC4.3□□□□□ -1.72
Srp54bE9PXC0 Gm22392-201ENSMUST00000177971 107 ntBASIC4.3□□□□□ -1.72
Srp54bE9PXC0 Gm28709-201ENSMUST00000186967 456 ntTSL 5 BASIC4.3□□□□□ -1.72
Srp54bE9PXC0 Gm28612-201ENSMUST00000189214 416 ntTSL 5 BASIC4.3□□□□□ -1.72
Srp54bE9PXC0 Gm37340-201ENSMUST00000193124 759 ntTSL 5 BASIC4.3□□□□□ -1.72
Srp54bE9PXC0 Gm44300-201ENSMUST00000196792 121 ntBASIC4.3□□□□□ -1.72
Srp54bE9PXC0 Gm43005-201ENSMUST00000199015 648 ntBASIC4.3□□□□□ -1.72
Srp54bE9PXC0 Csn1s2a-209ENSMUST00000200322 797 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
Srp54bE9PXC0 Gm43531-201ENSMUST00000200676 1114 ntBASIC4.3□□□□□ -1.72
Srp54bE9PXC0 Gm43941-201ENSMUST00000203303 1073 ntBASIC4.3□□□□□ -1.72
Srp54bE9PXC0 Gm44023-201ENSMUST00000203710 469 ntBASIC4.3□□□□□ -1.72
Srp54bE9PXC0 Olfr442-ps1-201ENSMUST00000204261 316 ntBASIC4.3□□□□□ -1.72
Srp54bE9PXC0 Gm35325-201ENSMUST00000208979 771 ntTSL 2 BASIC4.3□□□□□ -1.72
Srp54bE9PXC0 4930458B22Rik-201ENSMUST00000209339 754 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Srp54bE9PXC0 AC151843.1-201ENSMUST00000215960 691 ntBASIC4.3□□□□□ -1.72
Srp54bE9PXC0 AC155921.1-201ENSMUST00000216568 3841 ntBASIC4.3□□□□□ -1.72
Srp54bE9PXC0 AL772397.1-201ENSMUST00000216707 606 ntBASIC4.3□□□□□ -1.72
Srp54bE9PXC0 AC159622.1-201ENSMUST00000221004 554 ntBASIC4.3□□□□□ -1.72
Srp54bE9PXC0 CT030194.1-201ENSMUST00000225507 532 ntBASIC4.3□□□□□ -1.72
Srp54bE9PXC0 AC131747.1-201ENSMUST00000226159 793 ntBASIC4.3□□□□□ -1.72
Srp54bE9PXC0 4930504O13Rik-201ENSMUST00000064614 549 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Srp54bE9PXC0 Olfr741-201ENSMUST00000071932 936 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Srp54bE9PXC0 Olfr1458-201ENSMUST00000076729 906 ntAPPRIS ALT2 BASIC4.3□□□□□ -1.72
Srp54bE9PXC0 n-R5s160-201ENSMUST00000083096 120 ntBASIC4.3□□□□□ -1.72
Srp54bE9PXC0 Gm26176-201ENSMUST00000083795 105 ntBASIC4.3□□□□□ -1.72
Srp54bE9PXC0 Olfr1290-201ENSMUST00000099616 939 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Srp54bE9PXC0 Olfr1241-201ENSMUST00000099778 945 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Srp54bE9PXC0 Olfr1216-201ENSMUST00000099800 936 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Srp54bE9PXC0 Olfr1143-203ENSMUST00000111568 1970 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Srp54bE9PXC0 Synpr-207ENSMUST00000223583 3362 ntBASIC4.3□□□□□ -1.72
Srp54bE9PXC0 Gm5248-201ENSMUST00000186108 4046 ntBASIC4.3□□□□□ -1.72
Srp54bE9PXC0 9330158H04Rik-201ENSMUST00000101535 3174 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Srp54bE9PXC0 Fzd3-202ENSMUST00000131309 12734 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Srp54bE9PXC0 Oog1-202ENSMUST00000222112 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
Srp54bE9PXC0 Gpr141-201ENSMUST00000065335 3433 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Srp54bE9PXC0 Gm45160-201ENSMUST00000207112 3099 ntBASIC4.3□□□□□ -1.72
Srp54bE9PXC0 Gm15226-201ENSMUST00000156526 2971 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Srp54bE9PXC0 Lipo5-201ENSMUST00000156818 2003 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Srp54bE9PXC0 Olfr1020-202ENSMUST00000215347 2640 ntAPPRIS P1 TSL 3 BASIC4.29□□□□□ -1.72
Srp54bE9PXC0 Gpm6a-201ENSMUST00000033915 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Srp54bE9PXC0 Gm43059-201ENSMUST00000202437 1388 ntBASIC4.29□□□□□ -1.72
Srp54bE9PXC0 Olfr113-201ENSMUST00000216181 1671 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Srp54bE9PXC0 Mier1-203ENSMUST00000106855 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
Srp54bE9PXC0 Klra4-201ENSMUST00000119096 1245 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Srp54bE9PXC0 Rpl27-ps2-201ENSMUST00000120378 399 ntBASIC4.29□□□□□ -1.72
Srp54bE9PXC0 Olfr1027-ps1-201ENSMUST00000122338 875 ntBASIC4.29□□□□□ -1.72
Srp54bE9PXC0 Chrna1os-201ENSMUST00000125413 680 ntTSL 3 BASIC4.29□□□□□ -1.72
Srp54bE9PXC0 Olfr406-201ENSMUST00000133561 1101 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Srp54bE9PXC0 2210414B05Rik-201ENSMUST00000139600 872 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Srp54bE9PXC0 Crem-222ENSMUST00000144496 978 ntTSL 5 BASIC4.29□□□□□ -1.72
Srp54bE9PXC0 Gm23554-201ENSMUST00000157818 110 ntBASIC4.29□□□□□ -1.72
Srp54bE9PXC0 Ear-ps7-201ENSMUST00000161287 442 ntBASIC4.29□□□□□ -1.72
Srp54bE9PXC0 Gm16134-201ENSMUST00000161714 336 ntBASIC4.29□□□□□ -1.72
Srp54bE9PXC0 Vmn1r174-201ENSMUST00000167551 942 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Srp54bE9PXC0 V1rd19-201ENSMUST00000173571 1157 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Srp54bE9PXC0 Tppp2-202ENSMUST00000177625 627 ntAPPRIS P1 TSL 3 BASIC4.29□□□□□ -1.72
Srp54bE9PXC0 Gm19427-201ENSMUST00000183619 208 ntBASIC4.29□□□□□ -1.72
Srp54bE9PXC0 1110015O18Rik-201ENSMUST00000183632 570 ntTSL 3 BASIC4.29□□□□□ -1.72
Srp54bE9PXC0 Gm30280-201ENSMUST00000192214 262 ntBASIC4.29□□□□□ -1.72
Srp54bE9PXC0 4930503O07Rik-201ENSMUST00000193395 578 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Srp54bE9PXC0 Gm37601-201ENSMUST00000194922 394 ntBASIC4.29□□□□□ -1.72
Srp54bE9PXC0 Gm37505-201ENSMUST00000195670 461 ntTSL 5 BASIC4.29□□□□□ -1.72
Srp54bE9PXC0 Gm44523-201ENSMUST00000205616 417 ntBASIC4.29□□□□□ -1.72
Srp54bE9PXC0 Gm44857-201ENSMUST00000208331 196 ntBASIC4.29□□□□□ -1.72
Srp54bE9PXC0 Gm45086-201ENSMUST00000209052 462 ntTSL 5 BASIC4.29□□□□□ -1.72
Srp54bE9PXC0 4930470O06Rik-201ENSMUST00000209438 662 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Srp54bE9PXC0 Arl2bp-203ENSMUST00000211858 318 ntTSL 5 BASIC4.29□□□□□ -1.72
Srp54bE9PXC0 Gm45727-201ENSMUST00000212886 572 ntBASIC4.29□□□□□ -1.72
Srp54bE9PXC0 Olfr556-202ENSMUST00000213485 3825 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Srp54bE9PXC0 Gm46138-201ENSMUST00000215294 426 ntBASIC4.29□□□□□ -1.72
Srp54bE9PXC0 AC123830.1-201ENSMUST00000217156 609 ntTSL 3 BASIC4.29□□□□□ -1.72
Srp54bE9PXC0 Kcnj1-201ENSMUST00000047334 2987 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Srp54bE9PXC0 Gm23975-201ENSMUST00000082685 106 ntBASIC4.29□□□□□ -1.72
Srp54bE9PXC0 Snord14e-201ENSMUST00000082857 90 ntBASIC4.29□□□□□ -1.72
Srp54bE9PXC0 Vmn1r167-202ENSMUST00000227713 2677 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 83.4 ms