Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Tsx-201ENSMUST00000033691 812 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Scn3aA2ASI5 Olfr818-201ENSMUST00000074308 957 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Scn3aA2ASI5 Elavl4-202ENSMUST00000102723 4024 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Scn3aA2ASI5 Dnah7a-201ENSMUST00000094964 12245 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Scn3aA2ASI5 Rd3l-203ENSMUST00000189759 1427 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Scn3aA2ASI5 Gm8989-201ENSMUST00000184782 7275 ntBASIC4.18□□□□□ -1.74
Scn3aA2ASI5 Gm28362-201ENSMUST00000189430 2420 ntBASIC4.18□□□□□ -1.74
Scn3aA2ASI5 Gm35191-201ENSMUST00000200925 2475 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Scn3aA2ASI5 Ccr9-205ENSMUST00000180093 4239 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Scn3aA2ASI5 Gm15988-201ENSMUST00000118677 367 ntBASIC4.18□□□□□ -1.74
Scn3aA2ASI5 Grip1os2-201ENSMUST00000153898 722 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Scn3aA2ASI5 Gm21959-201ENSMUST00000178439 452 ntBASIC4.18□□□□□ -1.74
Scn3aA2ASI5 Gm38393-201ENSMUST00000179360 1199 ntAPPRIS P5 TSL 5 BASIC4.18□□□□□ -1.74
Scn3aA2ASI5 1700020G17Rik-202ENSMUST00000190237 739 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Scn3aA2ASI5 Gm43049-202ENSMUST00000198942 559 ntTSL 2 BASIC4.18□□□□□ -1.74
Scn3aA2ASI5 AC155167.1-201ENSMUST00000228931 614 ntBASIC4.18□□□□□ -1.74
Scn3aA2ASI5 Mir28a-201ENSMUST00000083560 86 ntBASIC4.18□□□□□ -1.74
Scn3aA2ASI5 Vmn1r171-206ENSMUST00000227386 2570 ntAPPRIS ALT2 BASIC4.18□□□□□ -1.74
Scn3aA2ASI5 Zfp945-205ENSMUST00000160457 6497 ntAPPRIS P4 TSL 1 (best) BASIC4.18□□□□□ -1.74
Scn3aA2ASI5 Dnah7c-204ENSMUST00000189749 12207 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Scn3aA2ASI5 Olfr1484-204ENSMUST00000216014 3842 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
Scn3aA2ASI5 Slfn8-203ENSMUST00000108152 3083 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Scn3aA2ASI5 Nlrp9a-204ENSMUST00000122040 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
Scn3aA2ASI5 Olfr124-202ENSMUST00000215168 4497 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Scn3aA2ASI5 Homer1-205ENSMUST00000109492 1533 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Scn3aA2ASI5 Zfp759-201ENSMUST00000052716 3482 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Scn3aA2ASI5 Arrdc3-201ENSMUST00000099356 4101 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Scn3aA2ASI5 4921515E04Rik-203ENSMUST00000227364 2309 ntBASIC4.17□□□□□ -1.74
Scn3aA2ASI5 Mid2-203ENSMUST00000112993 5916 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Scn3aA2ASI5 Gm24127-201ENSMUST00000104110 130 ntBASIC4.17□□□□□ -1.74
Scn3aA2ASI5 Gm44611-201ENSMUST00000207507 355 ntBASIC4.17□□□□□ -1.74
Scn3aA2ASI5 2500002B13Rik-202ENSMUST00000210752 298 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Scn3aA2ASI5 AC158686.2-201ENSMUST00000218599 976 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Scn3aA2ASI5 4930556N09Rik-202ENSMUST00000219466 1015 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Scn3aA2ASI5 CT025611.2-201ENSMUST00000220475 879 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Scn3aA2ASI5 Olfr945-201ENSMUST00000076903 963 ntAPPRIS P2 BASIC4.17□□□□□ -1.74
Scn3aA2ASI5 Gm25630-201ENSMUST00000084000 162 ntBASIC4.17□□□□□ -1.74
Scn3aA2ASI5 Gm43508-201ENSMUST00000197251 3783 ntBASIC4.17□□□□□ -1.74
Scn3aA2ASI5 Olfr1211-204ENSMUST00000215205 4220 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Scn3aA2ASI5 Spc25-201ENSMUST00000005365 1352 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
Scn3aA2ASI5 Olfr788-202ENSMUST00000213222 4747 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Scn3aA2ASI5 4930415L06Rik-201ENSMUST00000088146 2617 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Scn3aA2ASI5 Gm38010-201ENSMUST00000192592 2784 ntBASIC4.17□□□□□ -1.74
Scn3aA2ASI5 Vmn1r77-203ENSMUST00000227320 8308 ntAPPRIS P2 BASIC4.17□□□□□ -1.74
Scn3aA2ASI5 Gm45066-201ENSMUST00000207528 2551 ntBASIC4.17□□□□□ -1.74
Scn3aA2ASI5 Olfr1177-ps-201ENSMUST00000137895 921 ntAPPRIS ALT2 BASIC4.17□□□□□ -1.74
Scn3aA2ASI5 Gm43464-201ENSMUST00000198003 317 ntTSL 3 BASIC4.17□□□□□ -1.74
Scn3aA2ASI5 Slfn5os-202ENSMUST00000216469 550 ntTSL 5 BASIC4.17□□□□□ -1.74
Scn3aA2ASI5 AC126275.2-201ENSMUST00000225224 253 ntBASIC4.17□□□□□ -1.74
Scn3aA2ASI5 AC117656.3-202ENSMUST00000225842 1055 ntBASIC4.17□□□□□ -1.74
Scn3aA2ASI5 Olfr943-201ENSMUST00000071617 1079 ntAPPRIS P2 TSL 3 BASIC4.17□□□□□ -1.74
Scn3aA2ASI5 Gm4987-201ENSMUST00000078326 408 ntBASIC4.17□□□□□ -1.74
Scn3aA2ASI5 Nlrp4c-201ENSMUST00000037728 3615 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Scn3aA2ASI5 Gm37456-201ENSMUST00000193176 5837 ntBASIC4.16□□□□□ -1.74
Scn3aA2ASI5 Gm38269-201ENSMUST00000194549 3298 ntBASIC4.16□□□□□ -1.74
Scn3aA2ASI5 Nae1-201ENSMUST00000034349 1808 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Scn3aA2ASI5 Gm24608-201ENSMUST00000104381 136 ntBASIC4.16□□□□□ -1.74
Scn3aA2ASI5 Gm12543-201ENSMUST00000120410 543 ntBASIC4.16□□□□□ -1.74
Scn3aA2ASI5 Gm11448-201ENSMUST00000120427 450 ntBASIC4.16□□□□□ -1.74
Scn3aA2ASI5 Gm11349-201ENSMUST00000122209 1116 ntBASIC4.16□□□□□ -1.74
Scn3aA2ASI5 Tarbp2-207ENSMUST00000142114 420 ntTSL 5 BASIC4.16□□□□□ -1.74
Scn3aA2ASI5 Gm15902-201ENSMUST00000146949 469 ntTSL 3 BASIC4.16□□□□□ -1.74
Scn3aA2ASI5 Platr16-202ENSMUST00000150529 545 ntTSL 3 BASIC4.16□□□□□ -1.74
Scn3aA2ASI5 Gm22890-201ENSMUST00000158642 144 ntBASIC4.16□□□□□ -1.74
Scn3aA2ASI5 Obox2-202ENSMUST00000172478 818 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Scn3aA2ASI5 Gm6900-201ENSMUST00000178971 342 ntBASIC4.16□□□□□ -1.74
Scn3aA2ASI5 Gm28314-201ENSMUST00000191276 345 ntBASIC4.16□□□□□ -1.74
Scn3aA2ASI5 Cyp3a63-ps-201ENSMUST00000196626 1170 ntBASIC4.16□□□□□ -1.74
Scn3aA2ASI5 Igkv14-118-2-201ENSMUST00000198287 339 ntBASIC4.16□□□□□ -1.74
Scn3aA2ASI5 Igkv14-126-1-201ENSMUST00000199899 346 ntBASIC4.16□□□□□ -1.74
Scn3aA2ASI5 Igkv8-31-201ENSMUST00000200040 372 ntBASIC4.16□□□□□ -1.74
Scn3aA2ASI5 Gm42723-202ENSMUST00000200561 1254 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Scn3aA2ASI5 Gm44487-201ENSMUST00000205145 325 ntBASIC4.16□□□□□ -1.74
Scn3aA2ASI5 AC158523.1-201ENSMUST00000221398 328 ntBASIC4.16□□□□□ -1.74
Scn3aA2ASI5 AC131997.2-201ENSMUST00000227452 362 ntBASIC4.16□□□□□ -1.74
Scn3aA2ASI5 AC115291.2-201ENSMUST00000228335 437 ntBASIC4.16□□□□□ -1.74
Scn3aA2ASI5 Rps15a-ps1-201ENSMUST00000071120 393 ntBASIC4.16□□□□□ -1.74
Scn3aA2ASI5 Gm23925-201ENSMUST00000082471 132 ntBASIC4.16□□□□□ -1.74
Scn3aA2ASI5 Snord35b-201ENSMUST00000082833 87 ntBASIC4.16□□□□□ -1.74
Scn3aA2ASI5 Snord15a-201ENSMUST00000083888 148 ntBASIC4.16□□□□□ -1.74
Scn3aA2ASI5 Olfr105-ps-202ENSMUST00000215518 3778 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Scn3aA2ASI5 Olfr706-202ENSMUST00000213918 4828 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Scn3aA2ASI5 Cyp3a25-201ENSMUST00000068317 2000 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Scn3aA2ASI5 Gm42481-201ENSMUST00000196822 2178 ntBASIC4.15□□□□□ -1.74
Scn3aA2ASI5 Tex47-202ENSMUST00000159546 1402 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
Scn3aA2ASI5 Gm30302-202ENSMUST00000220773 3511 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
Scn3aA2ASI5 Xlr5a-202ENSMUST00000114520 867 ntAPPRIS P1 TSL 3 BASIC4.15□□□□□ -1.74
Scn3aA2ASI5 Gm14655-201ENSMUST00000120124 578 ntBASIC4.15□□□□□ -1.74
Scn3aA2ASI5 4930406D18Rik-202ENSMUST00000152827 657 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
Scn3aA2ASI5 Gm16353-201ENSMUST00000159458 1223 ntBASIC4.15□□□□□ -1.74
Scn3aA2ASI5 Gm17210-201ENSMUST00000169975 391 ntTSL 3 BASIC4.15□□□□□ -1.74
Scn3aA2ASI5 Gm27903-201ENSMUST00000175482 126 ntBASIC4.15□□□□□ -1.74
Scn3aA2ASI5 Mir6938-201ENSMUST00000184173 63 ntBASIC4.15□□□□□ -1.74
Scn3aA2ASI5 Gm5368-201ENSMUST00000189012 589 ntBASIC4.15□□□□□ -1.74
Scn3aA2ASI5 Gm43491-201ENSMUST00000197133 784 ntBASIC4.15□□□□□ -1.74
Scn3aA2ASI5 Gm32381-201ENSMUST00000203192 476 ntBASIC4.15□□□□□ -1.74
Scn3aA2ASI5 Gm45157-201ENSMUST00000208729 401 ntBASIC4.15□□□□□ -1.74
Scn3aA2ASI5 Gm45826-201ENSMUST00000212226 265 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
Scn3aA2ASI5 Gm35857-201ENSMUST00000212739 178 ntBASIC4.15□□□□□ -1.74
Scn3aA2ASI5 AC155237.2-201ENSMUST00000228487 478 ntBASIC4.15□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 100.6 ms