Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Gm22890-201ENSMUST00000158642 144 ntBASIC3.89□□□□□ -1.79
Scn1aA2APX8 Gm35371-201ENSMUST00000216204 579 ntTSL 5 BASIC3.89□□□□□ -1.79
Scn1aA2APX8 Gm19073-201ENSMUST00000219978 555 ntBASIC3.89□□□□□ -1.79
Scn1aA2APX8 AC158631.2-201ENSMUST00000219999 478 ntBASIC3.89□□□□□ -1.79
Scn1aA2APX8 AC136976.1-201ENSMUST00000221440 381 ntTSL 3 BASIC3.89□□□□□ -1.79
Scn1aA2APX8 Snord35b-201ENSMUST00000082833 87 ntBASIC3.89□□□□□ -1.79
Scn1aA2APX8 Mir133a-2-201ENSMUST00000083526 104 ntBASIC3.89□□□□□ -1.79
Scn1aA2APX8 Serpinb6c-202ENSMUST00000172184 1327 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Scn1aA2APX8 Nbeal1-203ENSMUST00000160834 15731 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Scn1aA2APX8 Olfr1312-203ENSMUST00000213961 5345 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Scn1aA2APX8 Olfr816-202ENSMUST00000213438 3306 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Scn1aA2APX8 Atp1b4-201ENSMUST00000016471 4201 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Scn1aA2APX8 Zfp972-202ENSMUST00000108934 561 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Scn1aA2APX8 Gm16005-201ENSMUST00000120515 269 ntBASIC3.88□□□□□ -1.79
Scn1aA2APX8 Mup-ps20-201ENSMUST00000121132 389 ntBASIC3.88□□□□□ -1.79
Scn1aA2APX8 Olfr1003-ps1-201ENSMUST00000122238 717 ntBASIC3.88□□□□□ -1.79
Scn1aA2APX8 Gm23123-201ENSMUST00000157648 144 ntBASIC3.88□□□□□ -1.79
Scn1aA2APX8 Gm24727-201ENSMUST00000158231 144 ntBASIC3.88□□□□□ -1.79
Scn1aA2APX8 Gm24675-201ENSMUST00000158757 259 ntBASIC3.88□□□□□ -1.79
Scn1aA2APX8 Gm20389-201ENSMUST00000174217 1006 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Scn1aA2APX8 Gm25037-201ENSMUST00000175418 110 ntBASIC3.88□□□□□ -1.79
Scn1aA2APX8 Mir6385-201ENSMUST00000184295 105 ntBASIC3.88□□□□□ -1.79
Scn1aA2APX8 4930404A12Rik-201ENSMUST00000199356 726 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Scn1aA2APX8 AC132121.1-201ENSMUST00000220774 332 ntBASIC3.88□□□□□ -1.79
Scn1aA2APX8 1700112M02Rik-201ENSMUST00000221719 348 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Scn1aA2APX8 Frmpd3-201ENSMUST00000044702 3141 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Scn1aA2APX8 Ankar-201ENSMUST00000053499 4571 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
Scn1aA2APX8 Zfp600-204ENSMUST00000168483 4244 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
Scn1aA2APX8 Cdh12-201ENSMUST00000075132 5636 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Scn1aA2APX8 Zfp759-201ENSMUST00000052716 3482 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Scn1aA2APX8 Gm11970-201ENSMUST00000116105 320 ntBASIC3.88□□□□□ -1.79
Scn1aA2APX8 Vmn1r-ps126-201ENSMUST00000117681 926 ntBASIC3.88□□□□□ -1.79
Scn1aA2APX8 Gm12543-201ENSMUST00000120410 543 ntBASIC3.88□□□□□ -1.79
Scn1aA2APX8 Gm13773-201ENSMUST00000156693 583 ntTSL 3 BASIC3.88□□□□□ -1.79
Scn1aA2APX8 Mir1934-201ENSMUST00000158127 83 ntBASIC3.88□□□□□ -1.79
Scn1aA2APX8 Gm27903-201ENSMUST00000175482 126 ntBASIC3.88□□□□□ -1.79
Scn1aA2APX8 Cyp3a63-ps-201ENSMUST00000196626 1170 ntBASIC3.88□□□□□ -1.79
Scn1aA2APX8 Gm43049-202ENSMUST00000198942 559 ntTSL 2 BASIC3.88□□□□□ -1.79
Scn1aA2APX8 Sult1c2-ps1-201ENSMUST00000200231 164 ntBASIC3.88□□□□□ -1.79
Scn1aA2APX8 Gm44475-201ENSMUST00000204041 424 ntBASIC3.88□□□□□ -1.79
Scn1aA2APX8 2500002B13Rik-202ENSMUST00000210752 298 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Scn1aA2APX8 Gm19219-201ENSMUST00000215863 724 ntBASIC3.88□□□□□ -1.79
Scn1aA2APX8 Gm18997-201ENSMUST00000216353 822 ntBASIC3.88□□□□□ -1.79
Scn1aA2APX8 Vmn1r89-206ENSMUST00000227319 985 ntBASIC3.88□□□□□ -1.79
Scn1aA2APX8 Olfr818-201ENSMUST00000074308 957 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Scn1aA2APX8 Gm4987-201ENSMUST00000078326 408 ntBASIC3.88□□□□□ -1.79
Scn1aA2APX8 Gm23736-201ENSMUST00000082553 75 ntBASIC3.88□□□□□ -1.79
Scn1aA2APX8 Gm25205-201ENSMUST00000082841 103 ntBASIC3.88□□□□□ -1.79
Scn1aA2APX8 Gm12888-201ENSMUST00000097905 1181 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Scn1aA2APX8 Olfr393-202ENSMUST00000213365 4048 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Scn1aA2APX8 Olfr1123-203ENSMUST00000216208 5245 ntAPPRIS ALT2 TSL 2 BASIC3.87□□□□□ -1.79
Scn1aA2APX8 Olfr1130-201ENSMUST00000213103 2643 ntAPPRIS P1 TSL 3 BASIC3.87□□□□□ -1.79
Scn1aA2APX8 Olfr1130-202ENSMUST00000216580 2648 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Scn1aA2APX8 AC115034.1-201ENSMUST00000215393 3846 ntBASIC3.87□□□□□ -1.79
Scn1aA2APX8 AC156632.1-201ENSMUST00000220626 3845 ntBASIC3.87□□□□□ -1.79
Scn1aA2APX8 Olfr706-202ENSMUST00000213918 4828 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Scn1aA2APX8 4931428L18Rik-202ENSMUST00000135245 889 ntAPPRIS P5 TSL 1 (best) BASIC3.87□□□□□ -1.79
Scn1aA2APX8 Gm23591-201ENSMUST00000157663 286 ntBASIC3.87□□□□□ -1.79
Scn1aA2APX8 Gm16353-201ENSMUST00000159458 1223 ntBASIC3.87□□□□□ -1.79
Scn1aA2APX8 Gm17191-201ENSMUST00000165200 417 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Scn1aA2APX8 Rhoay-ps3-201ENSMUST00000187648 576 ntBASIC3.87□□□□□ -1.79
Scn1aA2APX8 Faiml-202ENSMUST00000188555 560 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Scn1aA2APX8 Gm7639-201ENSMUST00000212608 484 ntBASIC3.87□□□□□ -1.79
Scn1aA2APX8 Olfr1244-ps1-201ENSMUST00000213226 683 ntBASIC3.87□□□□□ -1.79
Scn1aA2APX8 AC153971.2-201ENSMUST00000214553 777 ntBASIC3.87□□□□□ -1.79
Scn1aA2APX8 AC132465.3-201ENSMUST00000219326 195 ntBASIC3.87□□□□□ -1.79
Scn1aA2APX8 AC155266.1-201ENSMUST00000220762 904 ntBASIC3.87□□□□□ -1.79
Scn1aA2APX8 CT025523.1-201ENSMUST00000228318 694 ntBASIC3.87□□□□□ -1.79
Scn1aA2APX8 Olfr1309-202ENSMUST00000214537 4274 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Scn1aA2APX8 Olfr263-202ENSMUST00000215804 3963 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Scn1aA2APX8 Olfr642-202ENSMUST00000214299 4715 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Scn1aA2APX8 Igkv9-129-201ENSMUST00000103308 350 ntAPPRIS ALT2 BASIC3.87□□□□□ -1.79
Scn1aA2APX8 Gm23540-201ENSMUST00000157543 164 ntBASIC3.87□□□□□ -1.79
Scn1aA2APX8 Ptma-ps1-201ENSMUST00000181079 309 ntBASIC3.87□□□□□ -1.79
Scn1aA2APX8 Mir6408-201ENSMUST00000183643 91 ntBASIC3.87□□□□□ -1.79
Scn1aA2APX8 Obox4-ps1-201ENSMUST00000184446 700 ntBASIC3.87□□□□□ -1.79
Scn1aA2APX8 Gm21139-201ENSMUST00000186594 877 ntBASIC3.87□□□□□ -1.79
Scn1aA2APX8 Gm19086-201ENSMUST00000190772 665 ntBASIC3.87□□□□□ -1.79
Scn1aA2APX8 Olfr1480-203ENSMUST00000207904 1209 ntAPPRIS P1 TSL 3 BASIC3.87□□□□□ -1.79
Scn1aA2APX8 AC152415.1-201ENSMUST00000213320 440 ntBASIC3.87□□□□□ -1.79
Scn1aA2APX8 Gm29674-201ENSMUST00000218791 1139 ntTSL 5 BASIC3.87□□□□□ -1.79
Scn1aA2APX8 AC165164.1-202ENSMUST00000219324 649 ntTSL 3 BASIC3.87□□□□□ -1.79
Scn1aA2APX8 AC121569.2-201ENSMUST00000222557 574 ntTSL 2 BASIC3.87□□□□□ -1.79
Scn1aA2APX8 AC166369.1-201ENSMUST00000228126 351 ntBASIC3.87□□□□□ -1.79
Scn1aA2APX8 Olfr112-201ENSMUST00000085548 3103 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Scn1aA2APX8 Olfr1317-204ENSMUST00000216988 2488 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Scn1aA2APX8 Klhl28-203ENSMUST00000222508 6459 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Scn1aA2APX8 Slc9c1-201ENSMUST00000159945 3836 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Scn1aA2APX8 Vmn1r90-207ENSMUST00000227692 7101 ntAPPRIS P2 BASIC3.86□□□□□ -1.79
Scn1aA2APX8 Olfr629-203ENSMUST00000216300 2277 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Scn1aA2APX8 Vmn1r184-206ENSMUST00000228145 5888 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Scn1aA2APX8 Gm25860-201ENSMUST00000158252 126 ntBASIC3.86□□□□□ -1.79
Scn1aA2APX8 Gm26005-201ENSMUST00000158802 134 ntBASIC3.86□□□□□ -1.79
Scn1aA2APX8 Gm27468-201ENSMUST00000183577 106 ntBASIC3.86□□□□□ -1.79
Scn1aA2APX8 Gm2861-201ENSMUST00000199885 666 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Scn1aA2APX8 Gm45269-201ENSMUST00000210359 282 ntBASIC3.86□□□□□ -1.79
Scn1aA2APX8 AC107864.1-201ENSMUST00000217937 496 ntBASIC3.86□□□□□ -1.79
Scn1aA2APX8 AC080021.1-201ENSMUST00000228104 700 ntBASIC3.86□□□□□ -1.79
Scn1aA2APX8 Serpinb3d-201ENSMUST00000023861 1216 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Scn1aA2APX8 Olfr675-201ENSMUST00000073102 942 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms