Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Zfp968-203ENSMUST00000131676 1272 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
Trem1Q9JKE2 Gm23046-201ENSMUST00000158369 284 ntBASIC3.8□□□□□ -1.8
Trem1Q9JKE2 Gm16213-201ENSMUST00000160076 639 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Trem1Q9JKE2 Fcf1-202ENSMUST00000171040 731 ntTSL 3 BASIC3.8□□□□□ -1.8
Trem1Q9JKE2 Gm20542-201ENSMUST00000174582 372 ntBASIC3.8□□□□□ -1.8
Trem1Q9JKE2 Gm26621-201ENSMUST00000180413 700 ntTSL 2 BASIC3.8□□□□□ -1.8
Trem1Q9JKE2 Gm26828-201ENSMUST00000180640 172 ntBASIC3.8□□□□□ -1.8
Trem1Q9JKE2 Mir6244-201ENSMUST00000184156 117 ntBASIC3.8□□□□□ -1.8
Trem1Q9JKE2 Gm29563-201ENSMUST00000187249 496 ntBASIC3.8□□□□□ -1.8
Trem1Q9JKE2 Gm18505-201ENSMUST00000187360 790 ntBASIC3.8□□□□□ -1.8
Trem1Q9JKE2 Olfr580-ps1-201ENSMUST00000210528 943 ntBASIC3.8□□□□□ -1.8
Trem1Q9JKE2 Olfr673-ps1-201ENSMUST00000210859 411 ntBASIC3.8□□□□□ -1.8
Trem1Q9JKE2 Gm18225-201ENSMUST00000216708 742 ntBASIC3.8□□□□□ -1.8
Trem1Q9JKE2 AC158803.3-201ENSMUST00000220024 211 ntBASIC3.8□□□□□ -1.8
Trem1Q9JKE2 CT009754.1-201ENSMUST00000223489 558 ntTSL 3 BASIC3.8□□□□□ -1.8
Trem1Q9JKE2 AC124524.2-201ENSMUST00000223940 588 ntBASIC3.8□□□□□ -1.8
Trem1Q9JKE2 AC161884.2-201ENSMUST00000224513 227 ntBASIC3.8□□□□□ -1.8
Trem1Q9JKE2 AC192333.6-201ENSMUST00000224565 725 ntBASIC3.8□□□□□ -1.8
Trem1Q9JKE2 AC090496.1-201ENSMUST00000226020 260 ntBASIC3.8□□□□□ -1.8
Trem1Q9JKE2 AC158142.1-201ENSMUST00000226721 416 ntBASIC3.8□□□□□ -1.8
Trem1Q9JKE2 Snora70-201ENSMUST00000083047 137 ntBASIC3.8□□□□□ -1.8
Trem1Q9JKE2 A730046J19Rik-201ENSMUST00000135687 4707 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Trem1Q9JKE2 Dnah7c-204ENSMUST00000189749 12207 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Trem1Q9JKE2 Olfr736-202ENSMUST00000213402 2402 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Trem1Q9JKE2 Olfr1129-202ENSMUST00000213315 2255 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
Trem1Q9JKE2 Gm18594-201ENSMUST00000175733 1403 ntBASIC3.79□□□□□ -1.8
Trem1Q9JKE2 Vmn1r90-207ENSMUST00000227692 7101 ntAPPRIS P2 BASIC3.79□□□□□ -1.8
Trem1Q9JKE2 Mgat4e-202ENSMUST00000172898 1735 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
Trem1Q9JKE2 Gm43793-201ENSMUST00000201645 1333 ntBASIC3.79□□□□□ -1.8
Trem1Q9JKE2 Traj16-201ENSMUST00000103725 61 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Trem1Q9JKE2 Gm14816-201ENSMUST00000117174 294 ntBASIC3.79□□□□□ -1.8
Trem1Q9JKE2 Hbb-bh3-201ENSMUST00000118954 266 ntBASIC3.79□□□□□ -1.8
Trem1Q9JKE2 Gm11387-201ENSMUST00000120266 772 ntBASIC3.79□□□□□ -1.8
Trem1Q9JKE2 Gm14037-201ENSMUST00000120576 313 ntBASIC3.79□□□□□ -1.8
Trem1Q9JKE2 Gm11882-201ENSMUST00000121463 506 ntBASIC3.79□□□□□ -1.8
Trem1Q9JKE2 Gm23700-201ENSMUST00000158842 102 ntBASIC3.79□□□□□ -1.8
Trem1Q9JKE2 Vmn2r-ps74-201ENSMUST00000174705 917 ntBASIC3.79□□□□□ -1.8
Trem1Q9JKE2 Gm5974-201ENSMUST00000181607 986 ntBASIC3.79□□□□□ -1.8
Trem1Q9JKE2 Mir7687-201ENSMUST00000184722 59 ntBASIC3.79□□□□□ -1.8
Trem1Q9JKE2 1700025M24Rik-203ENSMUST00000191524 725 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Trem1Q9JKE2 Trbv28-201ENSMUST00000192804 264 ntBASIC3.79□□□□□ -1.8
Trem1Q9JKE2 Ighv1-79-201ENSMUST00000200152 350 ntBASIC3.79□□□□□ -1.8
Trem1Q9JKE2 C030038I04Rik-201ENSMUST00000207840 740 ntBASIC3.79□□□□□ -1.8
Trem1Q9JKE2 Olfr1498-ps1-201ENSMUST00000208721 991 ntBASIC3.79□□□□□ -1.8
Trem1Q9JKE2 Gm33601-201ENSMUST00000210001 961 ntBASIC3.79□□□□□ -1.8
Trem1Q9JKE2 Gm43154-210ENSMUST00000210190 1051 ntTSL 5 BASIC3.79□□□□□ -1.8
Trem1Q9JKE2 AC157085.1-201ENSMUST00000216343 162 ntBASIC3.79□□□□□ -1.8
Trem1Q9JKE2 Gm19256-201ENSMUST00000218550 231 ntBASIC3.79□□□□□ -1.8
Trem1Q9JKE2 AC108401.1-201ENSMUST00000219740 361 ntTSL 3 BASIC3.79□□□□□ -1.8
Trem1Q9JKE2 Vmn2r-ps92-201ENSMUST00000220242 388 ntBASIC3.79□□□□□ -1.8
Trem1Q9JKE2 Gm3800-201ENSMUST00000221086 554 ntBASIC3.79□□□□□ -1.8
Trem1Q9JKE2 4930455B14Rik-204ENSMUST00000224776 848 ntBASIC3.79□□□□□ -1.8
Trem1Q9JKE2 Gm5689-201ENSMUST00000041389 294 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Trem1Q9JKE2 Olfr352-201ENSMUST00000065416 948 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Trem1Q9JKE2 4930578G10Rik-201ENSMUST00000068158 614 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Trem1Q9JKE2 Gm10112-201ENSMUST00000075226 354 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Trem1Q9JKE2 Olfr792-201ENSMUST00000076575 936 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Trem1Q9JKE2 n-R5s152-201ENSMUST00000093641 119 ntBASIC3.79□□□□□ -1.8
Trem1Q9JKE2 Gm22444-201ENSMUST00000093693 108 ntBASIC3.79□□□□□ -1.8
Trem1Q9JKE2 Fpr-rs7-201ENSMUST00000095637 1017 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Trem1Q9JKE2 Spint3-201ENSMUST00000099097 557 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Trem1Q9JKE2 Btbd35f10-201ENSMUST00000178621 1952 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Trem1Q9JKE2 Gm11251-201ENSMUST00000119593 2800 ntBASIC3.79□□□□□ -1.8
Trem1Q9JKE2 Olfr1188-202ENSMUST00000217131 1406 ntAPPRIS ALT2 TSL 3 BASIC3.78□□□□□ -1.8
Trem1Q9JKE2 Adgre4-201ENSMUST00000025004 3491 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Trem1Q9JKE2 Olfr714-203ENSMUST00000214429 4324 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Trem1Q9JKE2 Olfr301-201ENSMUST00000174362 1937 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.8
Trem1Q9JKE2 Gm8734-201ENSMUST00000211669 1312 ntBASIC3.78□□□□□ -1.8
Trem1Q9JKE2 Fam111a-204ENSMUST00000151307 3687 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
Trem1Q9JKE2 Olfr1196-203ENSMUST00000216977 4225 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Trem1Q9JKE2 Gm32647-201ENSMUST00000206116 3288 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Trem1Q9JKE2 Ighv9-4-201ENSMUST00000103482 294 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Trem1Q9JKE2 Gm24124-201ENSMUST00000104103 132 ntBASIC3.78□□□□□ -1.8
Trem1Q9JKE2 Gm12285-201ENSMUST00000117347 233 ntBASIC3.78□□□□□ -1.8
Trem1Q9JKE2 Gm11874-201ENSMUST00000117437 130 ntBASIC3.78□□□□□ -1.8
Trem1Q9JKE2 Olfr1149-ps1-201ENSMUST00000118232 691 ntBASIC3.78□□□□□ -1.8
Trem1Q9JKE2 Gm12734-201ENSMUST00000120228 948 ntBASIC3.78□□□□□ -1.8
Trem1Q9JKE2 Gm13511-201ENSMUST00000121167 363 ntBASIC3.78□□□□□ -1.8
Trem1Q9JKE2 Gm13584-201ENSMUST00000137134 603 ntTSL 3 BASIC3.78□□□□□ -1.8
Trem1Q9JKE2 Gm16327-201ENSMUST00000137146 228 ntBASIC3.78□□□□□ -1.8
Trem1Q9JKE2 9130015L21Rik-201ENSMUST00000140319 606 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Trem1Q9JKE2 Gm25898-201ENSMUST00000158303 106 ntBASIC3.78□□□□□ -1.8
Trem1Q9JKE2 1700058P15Rik-201ENSMUST00000159981 413 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Trem1Q9JKE2 Snrpe-201ENSMUST00000164096 669 ntTSL 2 BASIC3.78□□□□□ -1.8
Trem1Q9JKE2 Gm6647-201ENSMUST00000170514 641 ntBASIC3.78□□□□□ -1.8
Trem1Q9JKE2 Vmn2r-ps68-201ENSMUST00000173880 861 ntBASIC3.78□□□□□ -1.8
Trem1Q9JKE2 Gm20428-201ENSMUST00000174365 283 ntBASIC3.78□□□□□ -1.8
Trem1Q9JKE2 Gm24811-201ENSMUST00000175313 100 ntBASIC3.78□□□□□ -1.8
Trem1Q9JKE2 Scgb2b29-ps-201ENSMUST00000187539 331 ntBASIC3.78□□□□□ -1.8
Trem1Q9JKE2 Gm6546-201ENSMUST00000192096 766 ntBASIC3.78□□□□□ -1.8
Trem1Q9JKE2 Gm26801-202ENSMUST00000193187 610 ntTSL 3 BASIC3.78□□□□□ -1.8
Trem1Q9JKE2 Gm37095-201ENSMUST00000195421 205 ntBASIC3.78□□□□□ -1.8
Trem1Q9JKE2 Gm7639-201ENSMUST00000212608 484 ntBASIC3.78□□□□□ -1.8
Trem1Q9JKE2 Gm7198-201ENSMUST00000219635 1074 ntBASIC3.78□□□□□ -1.8
Trem1Q9JKE2 AC133498.1-203ENSMUST00000221213 668 ntTSL 3 BASIC3.78□□□□□ -1.8
Trem1Q9JKE2 AC154441.1-201ENSMUST00000223653 1006 ntBASIC3.78□□□□□ -1.8
Trem1Q9JKE2 AC132260.2-201ENSMUST00000224482 344 ntBASIC3.78□□□□□ -1.8
Trem1Q9JKE2 AL606513.1-201ENSMUST00000225369 579 ntBASIC3.78□□□□□ -1.8
Trem1Q9JKE2 Scrg1-201ENSMUST00000034023 700 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Trem1Q9JKE2 Muc16-201ENSMUST00000034653 1035 ntTSL 2 BASIC3.78□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 108.9 ms