Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Olfr1274-ps-202ENSMUST00000216111 3395 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Lima1Q9ERG0 Gm37407-201ENSMUST00000194793 1316 ntBASIC3.87□□□□□ -1.79
Lima1Q9ERG0 Olfr782-202ENSMUST00000213970 1944 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Lima1Q9ERG0 Vmn2r-ps36-201ENSMUST00000172589 2562 ntBASIC3.87□□□□□ -1.79
Lima1Q9ERG0 Gm27008-201ENSMUST00000182400 1360 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Lima1Q9ERG0 Gm43178-201ENSMUST00000197257 1386 ntBASIC3.87□□□□□ -1.79
Lima1Q9ERG0 Olfr1130-201ENSMUST00000213103 2643 ntAPPRIS P1 TSL 3 BASIC3.87□□□□□ -1.79
Lima1Q9ERG0 Casp12-201ENSMUST00000027009 2649 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Lima1Q9ERG0 Gm42993-201ENSMUST00000196856 7325 ntBASIC3.86□□□□□ -1.79
Lima1Q9ERG0 Vmn1r45-205ENSMUST00000227571 2757 ntBASIC3.86□□□□□ -1.79
Lima1Q9ERG0 Gm3972-201ENSMUST00000173960 2861 ntBASIC3.86□□□□□ -1.79
Lima1Q9ERG0 Olfr392-202ENSMUST00000144724 3904 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
Lima1Q9ERG0 Olfr986-202ENSMUST00000214763 3274 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Lima1Q9ERG0 Gm38260-201ENSMUST00000193573 3995 ntBASIC3.86□□□□□ -1.79
Lima1Q9ERG0 Olfr741-203ENSMUST00000213903 3305 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Lima1Q9ERG0 E430024I08Rik-208ENSMUST00000223312 1573 ntTSL 5 BASIC3.86□□□□□ -1.79
Lima1Q9ERG0 0610010F05Rik-201ENSMUST00000043356 4392 ntAPPRIS P2 TSL 5 BASIC3.86□□□□□ -1.79
Lima1Q9ERG0 Gm23063-201ENSMUST00000102350 93 ntBASIC3.86□□□□□ -1.79
Lima1Q9ERG0 Gm25726-201ENSMUST00000104529 129 ntBASIC3.86□□□□□ -1.79
Lima1Q9ERG0 Gm23178-201ENSMUST00000116782 95 ntBASIC3.86□□□□□ -1.79
Lima1Q9ERG0 Rps12-ps26-201ENSMUST00000117751 333 ntBASIC3.86□□□□□ -1.79
Lima1Q9ERG0 Gm12577-201ENSMUST00000119701 574 ntBASIC3.86□□□□□ -1.79
Lima1Q9ERG0 Gm14605-201ENSMUST00000120599 268 ntBASIC3.86□□□□□ -1.79
Lima1Q9ERG0 Hmgb1-ps5-201ENSMUST00000121058 557 ntBASIC3.86□□□□□ -1.79
Lima1Q9ERG0 Gm4852-201ENSMUST00000121202 729 ntBASIC3.86□□□□□ -1.79
Lima1Q9ERG0 Gm13868-201ENSMUST00000122411 294 ntBASIC3.86□□□□□ -1.79
Lima1Q9ERG0 Gm26320-201ENSMUST00000157742 306 ntBASIC3.86□□□□□ -1.79
Lima1Q9ERG0 D6Ertd474e-203ENSMUST00000160188 683 ntTSL 3 BASIC3.86□□□□□ -1.79
Lima1Q9ERG0 Gm18522-201ENSMUST00000173947 650 ntBASIC3.86□□□□□ -1.79
Lima1Q9ERG0 Gm20701-201ENSMUST00000176082 347 ntBASIC3.86□□□□□ -1.79
Lima1Q9ERG0 Gm20795-201ENSMUST00000178528 699 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Lima1Q9ERG0 Gm21425-201ENSMUST00000180318 699 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Lima1Q9ERG0 1700047N06Rik-201ENSMUST00000194474 920 ntBASIC3.86□□□□□ -1.79
Lima1Q9ERG0 Znrd1as-204ENSMUST00000209623 1218 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
Lima1Q9ERG0 AC134528.1-201ENSMUST00000219156 387 ntTSL 2 BASIC3.86□□□□□ -1.79
Lima1Q9ERG0 Gpx8-201ENSMUST00000022282 1018 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Lima1Q9ERG0 9230110F15Rik-201ENSMUST00000054175 1135 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Lima1Q9ERG0 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC3.86□□□□□ -1.79
Lima1Q9ERG0 Olfr986-201ENSMUST00000062229 1016 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Lima1Q9ERG0 Hamp-201ENSMUST00000062620 410 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Lima1Q9ERG0 Vmn1r34-201ENSMUST00000074381 930 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Lima1Q9ERG0 Zfp518a-201ENSMUST00000050092 6840 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
Lima1Q9ERG0 P2ry14-205ENSMUST00000197220 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Lima1Q9ERG0 Vmn1r46-204ENSMUST00000228231 13338 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Lima1Q9ERG0 Calcrl-202ENSMUST00000099944 3973 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Lima1Q9ERG0 4930467E23Rik-201ENSMUST00000098909 2514 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Lima1Q9ERG0 Olfr360-202ENSMUST00000216706 1816 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Lima1Q9ERG0 Kctd4-201ENSMUST00000050120 3998 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Lima1Q9ERG0 Vmn1r36-203ENSMUST00000226728 1458 ntBASIC3.86□□□□□ -1.79
Lima1Q9ERG0 Aspn-202ENSMUST00000177948 2329 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Lima1Q9ERG0 AC142245.1-201ENSMUST00000226611 1505 ntBASIC3.85□□□□□ -1.79
Lima1Q9ERG0 Gm32647-201ENSMUST00000206116 3288 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Lima1Q9ERG0 Gm42728-201ENSMUST00000202644 1552 ntBASIC3.85□□□□□ -1.79
Lima1Q9ERG0 Sult6b1-204ENSMUST00000169544 2060 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Lima1Q9ERG0 Gm18493-201ENSMUST00000192084 1612 ntBASIC3.85□□□□□ -1.79
Lima1Q9ERG0 Zfp955a-201ENSMUST00000008830 1638 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Lima1Q9ERG0 Srek1-204ENSMUST00000210489 6330 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Lima1Q9ERG0 Vmn1r81-203ENSMUST00000227973 14002 ntAPPRIS P2 BASIC3.85□□□□□ -1.79
Lima1Q9ERG0 4930522H14Rik-202ENSMUST00000102725 854 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
Lima1Q9ERG0 Mir761-201ENSMUST00000103245 76 ntBASIC3.85□□□□□ -1.79
Lima1Q9ERG0 Gm14539-201ENSMUST00000117527 174 ntBASIC3.85□□□□□ -1.79
Lima1Q9ERG0 Arl6-203ENSMUST00000118438 875 ntTSL 3 BASIC3.85□□□□□ -1.79
Lima1Q9ERG0 Gm14788-201ENSMUST00000119457 375 ntBASIC3.85□□□□□ -1.79
Lima1Q9ERG0 Gm12807-201ENSMUST00000121546 962 ntBASIC3.85□□□□□ -1.79
Lima1Q9ERG0 Gm23499-201ENSMUST00000157736 268 ntBASIC3.85□□□□□ -1.79
Lima1Q9ERG0 Gm26036-201ENSMUST00000158149 144 ntBASIC3.85□□□□□ -1.79
Lima1Q9ERG0 Gm23023-201ENSMUST00000158767 109 ntBASIC3.85□□□□□ -1.79
Lima1Q9ERG0 4930445B16Rik-201ENSMUST00000170085 1123 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Lima1Q9ERG0 Gm26460-201ENSMUST00000175061 126 ntBASIC3.85□□□□□ -1.79
Lima1Q9ERG0 Mir6996-201ENSMUST00000183922 61 ntBASIC3.85□□□□□ -1.79
Lima1Q9ERG0 Gm29479-201ENSMUST00000190352 455 ntBASIC3.85□□□□□ -1.79
Lima1Q9ERG0 Gm32780-201ENSMUST00000201402 540 ntTSL 3 BASIC3.85□□□□□ -1.79
Lima1Q9ERG0 Clec2f-202ENSMUST00000204981 657 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Lima1Q9ERG0 Gm19726-201ENSMUST00000205008 240 ntBASIC3.85□□□□□ -1.79
Lima1Q9ERG0 Gm5338-201ENSMUST00000209530 639 ntBASIC3.85□□□□□ -1.79
Lima1Q9ERG0 Gm5358-201ENSMUST00000212814 353 ntBASIC3.85□□□□□ -1.79
Lima1Q9ERG0 AC159244.1-201ENSMUST00000220964 594 ntBASIC3.85□□□□□ -1.79
Lima1Q9ERG0 AC173345.3-201ENSMUST00000221245 1093 ntBASIC3.85□□□□□ -1.79
Lima1Q9ERG0 AC118006.1-201ENSMUST00000224211 501 ntBASIC3.85□□□□□ -1.79
Lima1Q9ERG0 AC168059.1-201ENSMUST00000225846 841 ntBASIC3.85□□□□□ -1.79
Lima1Q9ERG0 Gm28044-201ENSMUST00000044819 551 ntAPPRIS P1 TSL 3 BASIC3.85□□□□□ -1.79
Lima1Q9ERG0 Defb7-201ENSMUST00000047851 306 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Lima1Q9ERG0 Gm25581-201ENSMUST00000083410 164 ntBASIC3.85□□□□□ -1.79
Lima1Q9ERG0 Olfr365-203ENSMUST00000218602 5374 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Lima1Q9ERG0 Gm37298-201ENSMUST00000193770 3868 ntBASIC3.85□□□□□ -1.79
Lima1Q9ERG0 Ppef1-201ENSMUST00000071204 2483 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
Lima1Q9ERG0 Btbd35f17-201ENSMUST00000105014 1960 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Lima1Q9ERG0 Olfr1309-203ENSMUST00000214935 5448 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Lima1Q9ERG0 Olfr711-202ENSMUST00000207200 2966 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
Lima1Q9ERG0 4932431L22Rik-201ENSMUST00000193456 3140 ntBASIC3.84□□□□□ -1.79
Lima1Q9ERG0 Gm14062-201ENSMUST00000134795 4134 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Lima1Q9ERG0 Gm6592-201ENSMUST00000115563 507 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Lima1Q9ERG0 Rps15a-ps7-201ENSMUST00000117430 392 ntBASIC3.84□□□□□ -1.79
Lima1Q9ERG0 Gm11923-201ENSMUST00000118135 508 ntBASIC3.84□□□□□ -1.79
Lima1Q9ERG0 Gm6797-201ENSMUST00000119440 512 ntBASIC3.84□□□□□ -1.79
Lima1Q9ERG0 Gm15364-201ENSMUST00000119618 585 ntBASIC3.84□□□□□ -1.79
Lima1Q9ERG0 Gm11350-201ENSMUST00000121436 870 ntBASIC3.84□□□□□ -1.79
Lima1Q9ERG0 Gm14473-201ENSMUST00000122269 557 ntBASIC3.84□□□□□ -1.79
Lima1Q9ERG0 Gm26171-201ENSMUST00000158422 131 ntBASIC3.84□□□□□ -1.79
Lima1Q9ERG0 Gm8653-201ENSMUST00000163096 924 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 71.7 ms