Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm14559-201ENSMUST00000121745 496 ntBASIC3.86□□□□□ -1.79
Cdc40Q9DC48 Gm9003-201ENSMUST00000121810 482 ntBASIC3.86□□□□□ -1.79
Cdc40Q9DC48 Rap1gapos-201ENSMUST00000135358 471 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Cdc40Q9DC48 Gm25432-201ENSMUST00000158284 66 ntBASIC3.86□□□□□ -1.79
Cdc40Q9DC48 Cldn34c1-206ENSMUST00000169445 705 ntAPPRIS P3 TSL 5 BASIC3.86□□□□□ -1.79
Cdc40Q9DC48 Mir3473a-201ENSMUST00000175011 78 ntBASIC3.86□□□□□ -1.79
Cdc40Q9DC48 Gm14419-204ENSMUST00000178182 192 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Cdc40Q9DC48 Gm2004-202ENSMUST00000178872 192 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Cdc40Q9DC48 Gm14295-203ENSMUST00000179435 192 ntTSL 5 BASIC3.86□□□□□ -1.79
Cdc40Q9DC48 Gm8790-201ENSMUST00000194108 322 ntBASIC3.86□□□□□ -1.79
Cdc40Q9DC48 Gm22897-201ENSMUST00000197860 128 ntBASIC3.86□□□□□ -1.79
Cdc40Q9DC48 2510017J16Rik-201ENSMUST00000198718 1263 ntBASIC3.86□□□□□ -1.79
Cdc40Q9DC48 Gm43730-201ENSMUST00000199863 372 ntBASIC3.86□□□□□ -1.79
Cdc40Q9DC48 Gm44023-201ENSMUST00000203710 469 ntBASIC3.86□□□□□ -1.79
Cdc40Q9DC48 Gm44032-201ENSMUST00000204841 166 ntBASIC3.86□□□□□ -1.79
Cdc40Q9DC48 Gm44871-201ENSMUST00000207821 497 ntBASIC3.86□□□□□ -1.79
Cdc40Q9DC48 Gm36445-205ENSMUST00000211729 1100 ntTSL 5 BASIC3.86□□□□□ -1.79
Cdc40Q9DC48 Gm30034-201ENSMUST00000219589 248 ntTSL 5 BASIC3.86□□□□□ -1.79
Cdc40Q9DC48 Gm31931-201ENSMUST00000219666 222 ntBASIC3.86□□□□□ -1.79
Cdc40Q9DC48 AC154635.1-201ENSMUST00000221433 400 ntTSL 3 BASIC3.86□□□□□ -1.79
Cdc40Q9DC48 AC164424.1-201ENSMUST00000221690 170 ntBASIC3.86□□□□□ -1.79
Cdc40Q9DC48 CT025552.1-201ENSMUST00000224561 521 ntBASIC3.86□□□□□ -1.79
Cdc40Q9DC48 AC154738.5-201ENSMUST00000227397 310 ntBASIC3.86□□□□□ -1.79
Cdc40Q9DC48 Gtpbp8-201ENSMUST00000023348 836 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Cdc40Q9DC48 Defb7-201ENSMUST00000047851 306 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Cdc40Q9DC48 AC154329.1-201ENSMUST00000224408 3129 ntBASIC3.86□□□□□ -1.79
Cdc40Q9DC48 Dnah7b-201ENSMUST00000069293 12314 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Cdc40Q9DC48 Adam26a-201ENSMUST00000049577 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Cdc40Q9DC48 Gm45131-201ENSMUST00000208051 2582 ntBASIC3.86□□□□□ -1.79
Cdc40Q9DC48 Olfr570-202ENSMUST00000209778 1423 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Cdc40Q9DC48 Ndst4-204ENSMUST00000173932 7417 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Cdc40Q9DC48 2310003L06Rik-201ENSMUST00000007601 1603 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Cdc40Q9DC48 AC113059.2-201ENSMUST00000213462 3016 ntBASIC3.85□□□□□ -1.79
Cdc40Q9DC48 Gm26869-201ENSMUST00000181241 3523 ntTSL 2 BASIC3.85□□□□□ -1.79
Cdc40Q9DC48 Olfr1130-201ENSMUST00000213103 2643 ntAPPRIS P1 TSL 3 BASIC3.85□□□□□ -1.79
Cdc40Q9DC48 Casp12-201ENSMUST00000027009 2649 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Cdc40Q9DC48 Csmd3-204ENSMUST00000160658 12460 ntTSL 5 BASIC3.85□□□□□ -1.79
Cdc40Q9DC48 Olfr970-203ENSMUST00000215922 1739 ntAPPRIS P1 TSL 3 BASIC3.85□□□□□ -1.79
Cdc40Q9DC48 Bpifc-202ENSMUST00000105304 451 ntTSL 5 BASIC3.85□□□□□ -1.79
Cdc40Q9DC48 Gm23226-201ENSMUST00000116927 103 ntBASIC3.85□□□□□ -1.79
Cdc40Q9DC48 Gm4596-201ENSMUST00000117197 442 ntBASIC3.85□□□□□ -1.79
Cdc40Q9DC48 Gm5757-201ENSMUST00000117494 528 ntBASIC3.85□□□□□ -1.79
Cdc40Q9DC48 Clec2f-201ENSMUST00000121051 374 ntBASIC3.85□□□□□ -1.79
Cdc40Q9DC48 Gm13009-201ENSMUST00000121307 267 ntBASIC3.85□□□□□ -1.79
Cdc40Q9DC48 Gm25177-201ENSMUST00000122634 117 ntBASIC3.85□□□□□ -1.79
Cdc40Q9DC48 Gm13874-201ENSMUST00000130680 809 ntTSL 5 BASIC3.85□□□□□ -1.79
Cdc40Q9DC48 1700080G11Rik-201ENSMUST00000156401 436 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Cdc40Q9DC48 Gm17416-201ENSMUST00000163724 201 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Cdc40Q9DC48 Gm17159-201ENSMUST00000169043 482 ntBASIC3.85□□□□□ -1.79
Cdc40Q9DC48 4930445B16Rik-201ENSMUST00000170085 1123 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Cdc40Q9DC48 Vmn1r23-201ENSMUST00000175817 997 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Cdc40Q9DC48 Gm37857-201ENSMUST00000191784 1199 ntBASIC3.85□□□□□ -1.79
Cdc40Q9DC48 Gm37676-201ENSMUST00000195496 507 ntBASIC3.85□□□□□ -1.79
Cdc40Q9DC48 Gm43028-201ENSMUST00000202561 481 ntBASIC3.85□□□□□ -1.79
Cdc40Q9DC48 Gm19366-201ENSMUST00000206996 156 ntBASIC3.85□□□□□ -1.79
Cdc40Q9DC48 Lyrm1-209ENSMUST00000208424 888 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Cdc40Q9DC48 AU023762-202ENSMUST00000209716 961 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Cdc40Q9DC48 2210414F02Rik-201ENSMUST00000215316 396 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Cdc40Q9DC48 AC158641.1-201ENSMUST00000218933 229 ntBASIC3.85□□□□□ -1.79
Cdc40Q9DC48 Gm6462-201ENSMUST00000081488 304 ntBASIC3.85□□□□□ -1.79
Cdc40Q9DC48 Olfr310-201ENSMUST00000081918 1082 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Cdc40Q9DC48 Gm26165-201ENSMUST00000083791 138 ntBASIC3.85□□□□□ -1.79
Cdc40Q9DC48 Olfr625-ps1-201ENSMUST00000098195 966 ntAPPRIS P5 BASIC3.85□□□□□ -1.79
Cdc40Q9DC48 Gm7646-201ENSMUST00000198590 1346 ntBASIC3.85□□□□□ -1.79
Cdc40Q9DC48 Oog3-201ENSMUST00000050933 1865 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Cdc40Q9DC48 Olfr235-202ENSMUST00000207969 2447 ntAPPRIS P1 TSL 3 BASIC3.85□□□□□ -1.79
Cdc40Q9DC48 Zfp981-201ENSMUST00000105735 3038 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
Cdc40Q9DC48 A630033H20Rik-201ENSMUST00000067249 3004 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Cdc40Q9DC48 5830444F18Rik-201ENSMUST00000194009 1992 ntBASIC3.85□□□□□ -1.79
Cdc40Q9DC48 Vmn1r46-204ENSMUST00000228231 13338 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Cdc40Q9DC48 D3Ertd254e-201ENSMUST00000165956 6503 ntTSL 3 BASIC3.85□□□□□ -1.79
Cdc40Q9DC48 Olfr111-202ENSMUST00000214259 2620 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Cdc40Q9DC48 Plcb4-201ENSMUST00000035646 3635 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Cdc40Q9DC48 Vmn1r171-203ENSMUST00000226321 3067 ntAPPRIS ALT2 BASIC3.84□□□□□ -1.79
Cdc40Q9DC48 Gm7195-201ENSMUST00000190869 1707 ntBASIC3.84□□□□□ -1.79
Cdc40Q9DC48 BB287469-201ENSMUST00000110149 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Cdc40Q9DC48 Gm4027-201ENSMUST00000164838 1850 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Cdc40Q9DC48 Gm44847-201ENSMUST00000207104 1991 ntBASIC3.84□□□□□ -1.79
Cdc40Q9DC48 Gm43508-201ENSMUST00000197251 3783 ntBASIC3.84□□□□□ -1.79
Cdc40Q9DC48 Gm24788-201ENSMUST00000104283 156 ntBASIC3.84□□□□□ -1.79
Cdc40Q9DC48 Gm12173-201ENSMUST00000117622 273 ntBASIC3.84□□□□□ -1.79
Cdc40Q9DC48 Gm6565-201ENSMUST00000121217 438 ntBASIC3.84□□□□□ -1.79
Cdc40Q9DC48 Gm12340-201ENSMUST00000121617 462 ntBASIC3.84□□□□□ -1.79
Cdc40Q9DC48 Gm12103-201ENSMUST00000121892 362 ntBASIC3.84□□□□□ -1.79
Cdc40Q9DC48 4933416E03Rik-201ENSMUST00000133091 1126 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Cdc40Q9DC48 Gm15597-201ENSMUST00000145924 1050 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Cdc40Q9DC48 Snrpe-203ENSMUST00000166291 360 ntTSL 3 BASIC3.84□□□□□ -1.79
Cdc40Q9DC48 Svs4-201ENSMUST00000017142 731 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Cdc40Q9DC48 Gm25999-201ENSMUST00000175398 133 ntBASIC3.84□□□□□ -1.79
Cdc40Q9DC48 Gm27222-201ENSMUST00000183398 427 ntTSL 5 BASIC3.84□□□□□ -1.79
Cdc40Q9DC48 1700010H22Rik-202ENSMUST00000187592 1003 ntTSL 5 BASIC3.84□□□□□ -1.79
Cdc40Q9DC48 Scgb2b9-ps-201ENSMUST00000189522 334 ntBASIC3.84□□□□□ -1.79
Cdc40Q9DC48 Gm37300-201ENSMUST00000193327 280 ntBASIC3.84□□□□□ -1.79
Cdc40Q9DC48 Tgif1-ps-201ENSMUST00000201864 736 ntBASIC3.84□□□□□ -1.79
Cdc40Q9DC48 Gm44059-201ENSMUST00000204048 351 ntBASIC3.84□□□□□ -1.79
Cdc40Q9DC48 2200007N16Rik-201ENSMUST00000206367 238 ntBASIC3.84□□□□□ -1.79
Cdc40Q9DC48 Gm40608-201ENSMUST00000213692 654 ntTSL 3 BASIC3.84□□□□□ -1.79
Cdc40Q9DC48 AC140344.1-201ENSMUST00000223384 387 ntBASIC3.84□□□□□ -1.79
Cdc40Q9DC48 AC132260.2-201ENSMUST00000224482 344 ntBASIC3.84□□□□□ -1.79
Cdc40Q9DC48 Olfr1052-201ENSMUST00000054746 940 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms