Protein–RNA interactions for Protein: Q9D6Y1

Ccdc3, Coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3Q9D6Y1 Homer1-208ENSMUST00000109495 813 ntTSL 5 BASIC3.92□□□□□ -1.78
Ccdc3Q9D6Y1 Gm11866-201ENSMUST00000120209 335 ntBASIC3.92□□□□□ -1.78
Ccdc3Q9D6Y1 Gm12885-201ENSMUST00000122246 328 ntBASIC3.92□□□□□ -1.78
Ccdc3Q9D6Y1 Gm13335-201ENSMUST00000129994 471 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Ccdc3Q9D6Y1 Platr3-201ENSMUST00000146980 412 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Ccdc3Q9D6Y1 Gm23781-201ENSMUST00000157940 308 ntBASIC3.92□□□□□ -1.78
Ccdc3Q9D6Y1 Gm22857-201ENSMUST00000174969 134 ntBASIC3.92□□□□□ -1.78
Ccdc3Q9D6Y1 Gm22254-201ENSMUST00000179186 110 ntBASIC3.92□□□□□ -1.78
Ccdc3Q9D6Y1 Gm29408-201ENSMUST00000187536 216 ntBASIC3.92□□□□□ -1.78
Ccdc3Q9D6Y1 Gm21742-201ENSMUST00000189352 548 ntBASIC3.92□□□□□ -1.78
Ccdc3Q9D6Y1 4930420N18Rik-201ENSMUST00000191831 676 ntBASIC3.92□□□□□ -1.78
Ccdc3Q9D6Y1 Gm19214-201ENSMUST00000191956 1083 ntBASIC3.92□□□□□ -1.78
Ccdc3Q9D6Y1 Gm6303-201ENSMUST00000210123 471 ntBASIC3.92□□□□□ -1.78
Ccdc3Q9D6Y1 Gm19269-201ENSMUST00000211401 804 ntBASIC3.92□□□□□ -1.78
Ccdc3Q9D6Y1 AC152062.1-201ENSMUST00000218129 386 ntBASIC3.92□□□□□ -1.78
Ccdc3Q9D6Y1 AC187103.4-202ENSMUST00000225091 230 ntBASIC3.92□□□□□ -1.78
Ccdc3Q9D6Y1 AC154738.2-201ENSMUST00000227403 1110 ntBASIC3.92□□□□□ -1.78
Ccdc3Q9D6Y1 AC155167.1-201ENSMUST00000228931 614 ntBASIC3.92□□□□□ -1.78
Ccdc3Q9D6Y1 Serpinb9d-201ENSMUST00000067198 1250 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Ccdc3Q9D6Y1 4933400A11Rik-201ENSMUST00000068874 1230 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Ccdc3Q9D6Y1 Olfr1188-201ENSMUST00000090701 968 ntAPPRIS P2 BASIC3.92□□□□□ -1.78
Ccdc3Q9D6Y1 Olfr1242-201ENSMUST00000099777 1053 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Ccdc3Q9D6Y1 Vmn1r81-203ENSMUST00000227973 14002 ntAPPRIS P2 BASIC3.92□□□□□ -1.78
Ccdc3Q9D6Y1 Gm3623-201ENSMUST00000173643 2747 ntBASIC3.92□□□□□ -1.78
Ccdc3Q9D6Y1 Vmn1r81-205ENSMUST00000228764 13763 ntAPPRIS P2 BASIC3.92□□□□□ -1.78
Ccdc3Q9D6Y1 Gm44860-201ENSMUST00000208473 2346 ntBASIC3.92□□□□□ -1.78
Ccdc3Q9D6Y1 Btbd35f3-201ENSMUST00000140300 1943 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Ccdc3Q9D6Y1 Olfr1196-203ENSMUST00000216977 4225 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Ccdc3Q9D6Y1 Olfr916-203ENSMUST00000214093 3685 ntAPPRIS P1 TSL 3 BASIC3.91□□□□□ -1.78
Ccdc3Q9D6Y1 Atad1-201ENSMUST00000070210 2813 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Ccdc3Q9D6Y1 Gm24935-201ENSMUST00000103770 110 ntBASIC3.91□□□□□ -1.78
Ccdc3Q9D6Y1 Gm24608-201ENSMUST00000104381 136 ntBASIC3.91□□□□□ -1.78
Ccdc3Q9D6Y1 Gm24067-201ENSMUST00000104514 85 ntBASIC3.91□□□□□ -1.78
Ccdc3Q9D6Y1 C87499-203ENSMUST00000107143 1431 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
Ccdc3Q9D6Y1 Gm14282-201ENSMUST00000119484 240 ntBASIC3.91□□□□□ -1.78
Ccdc3Q9D6Y1 Gm14228-201ENSMUST00000131908 798 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Ccdc3Q9D6Y1 Rap1gapos-201ENSMUST00000135358 471 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Ccdc3Q9D6Y1 Myhas-202ENSMUST00000145021 950 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Ccdc3Q9D6Y1 Gm26276-201ENSMUST00000157099 109 ntBASIC3.91□□□□□ -1.78
Ccdc3Q9D6Y1 Obox4-ps9-201ENSMUST00000176927 1136 ntBASIC3.91□□□□□ -1.78
Ccdc3Q9D6Y1 1700027I24Rik-201ENSMUST00000183612 696 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Ccdc3Q9D6Y1 Gm37416-201ENSMUST00000193596 318 ntBASIC3.91□□□□□ -1.78
Ccdc3Q9D6Y1 Gm37898-201ENSMUST00000193781 174 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Ccdc3Q9D6Y1 Gm43491-201ENSMUST00000197133 784 ntBASIC3.91□□□□□ -1.78
Ccdc3Q9D6Y1 Gm43449-201ENSMUST00000202955 371 ntTSL 3 BASIC3.91□□□□□ -1.78
Ccdc3Q9D6Y1 CAAA01216754.6-201ENSMUST00000217183 398 ntTSL 5 BASIC3.91□□□□□ -1.78
Ccdc3Q9D6Y1 AC122317.1-201ENSMUST00000218404 708 ntTSL 5 BASIC3.91□□□□□ -1.78
Ccdc3Q9D6Y1 AC134864.1-201ENSMUST00000226326 511 ntBASIC3.91□□□□□ -1.78
Ccdc3Q9D6Y1 Mir28a-201ENSMUST00000083560 86 ntBASIC3.91□□□□□ -1.78
Ccdc3Q9D6Y1 n-R5s182-201ENSMUST00000083889 107 ntBASIC3.91□□□□□ -1.78
Ccdc3Q9D6Y1 Dnah12-201ENSMUST00000022433 12009 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Ccdc3Q9D6Y1 Foxp2-203ENSMUST00000115470 2692 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Ccdc3Q9D6Y1 Cd180-201ENSMUST00000022124 2650 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Ccdc3Q9D6Y1 Olfr992-203ENSMUST00000214895 2222 ntAPPRIS P1 TSL 3 BASIC3.91□□□□□ -1.78
Ccdc3Q9D6Y1 AC134596.1-201ENSMUST00000222016 1922 ntBASIC3.91□□□□□ -1.78
Ccdc3Q9D6Y1 Olfr1493-ps1-201ENSMUST00000207208 1777 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Ccdc3Q9D6Y1 Olfr290-202ENSMUST00000214501 5196 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Ccdc3Q9D6Y1 Olfr290-204ENSMUST00000216367 5182 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Ccdc3Q9D6Y1 Gm18180-201ENSMUST00000187562 1484 ntBASIC3.91□□□□□ -1.78
Ccdc3Q9D6Y1 Nlrp4e-201ENSMUST00000076470 3382 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Ccdc3Q9D6Y1 Pds5b-203ENSMUST00000110486 2900 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Ccdc3Q9D6Y1 Olfr38-202ENSMUST00000215796 2782 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Ccdc3Q9D6Y1 Olfr741-202ENSMUST00000205518 3406 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
Ccdc3Q9D6Y1 Olfr716-207ENSMUST00000216871 4062 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
Ccdc3Q9D6Y1 Gm43260-201ENSMUST00000197378 2430 ntBASIC3.9□□□□□ -1.78
Ccdc3Q9D6Y1 Olfr810-202ENSMUST00000214206 4809 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
Ccdc3Q9D6Y1 Gm6754-201ENSMUST00000117124 913 ntBASIC3.9□□□□□ -1.79
Ccdc3Q9D6Y1 Gm4596-201ENSMUST00000117197 442 ntBASIC3.9□□□□□ -1.79
Ccdc3Q9D6Y1 Ube2v2-204ENSMUST00000118236 893 ntTSL 5 BASIC3.9□□□□□ -1.79
Ccdc3Q9D6Y1 Gm15403-201ENSMUST00000119343 1227 ntBASIC3.9□□□□□ -1.79
Ccdc3Q9D6Y1 Gm12335-201ENSMUST00000119738 327 ntBASIC3.9□□□□□ -1.79
Ccdc3Q9D6Y1 V1rd19-201ENSMUST00000173571 1157 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Ccdc3Q9D6Y1 Gm20830-201ENSMUST00000178016 684 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Ccdc3Q9D6Y1 Gm33093-201ENSMUST00000197751 790 ntTSL 5 BASIC3.9□□□□□ -1.79
Ccdc3Q9D6Y1 Gm43424-201ENSMUST00000200484 253 ntBASIC3.9□□□□□ -1.79
Ccdc3Q9D6Y1 Olfr1486-ps1-201ENSMUST00000208835 220 ntBASIC3.9□□□□□ -1.79
Ccdc3Q9D6Y1 Gm7786-201ENSMUST00000210494 436 ntBASIC3.9□□□□□ -1.79
Ccdc3Q9D6Y1 Olfr1449-204ENSMUST00000215325 1149 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
Ccdc3Q9D6Y1 AC163621.2-201ENSMUST00000222229 682 ntBASIC3.9□□□□□ -1.79
Ccdc3Q9D6Y1 CU024892.1-201ENSMUST00000224869 515 ntBASIC3.9□□□□□ -1.79
Ccdc3Q9D6Y1 AC154419.1-201ENSMUST00000227627 272 ntBASIC3.9□□□□□ -1.79
Ccdc3Q9D6Y1 Olfr509-201ENSMUST00000061690 1075 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Ccdc3Q9D6Y1 Olfr855-201ENSMUST00000061693 992 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Ccdc3Q9D6Y1 Olfr924-201ENSMUST00000072977 927 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Ccdc3Q9D6Y1 Mir365-2-201ENSMUST00000083555 112 ntBASIC3.9□□□□□ -1.79
Ccdc3Q9D6Y1 Olfr1061-201ENSMUST00000099889 942 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Ccdc3Q9D6Y1 Zfp72-201ENSMUST00000091481 1629 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Ccdc3Q9D6Y1 Cd200r3-209ENSMUST00000166731 3876 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
Ccdc3Q9D6Y1 Olfr1323-203ENSMUST00000213556 5431 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
Ccdc3Q9D6Y1 Sorbs2-203ENSMUST00000124544 3798 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Ccdc3Q9D6Y1 Gm37011-201ENSMUST00000195543 2935 ntBASIC3.9□□□□□ -1.79
Ccdc3Q9D6Y1 Gm6902-202ENSMUST00000191169 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Ccdc3Q9D6Y1 Olfr172-202ENSMUST00000214139 1778 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Ccdc3Q9D6Y1 3110080E11Rik-201ENSMUST00000210736 3477 ntBASIC3.89□□□□□ -1.79
Ccdc3Q9D6Y1 Usp34-208ENSMUST00000180046 12200 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Ccdc3Q9D6Y1 Trappc13-205ENSMUST00000144060 3538 ntAPPRIS ALT1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Ccdc3Q9D6Y1 Gm14062-201ENSMUST00000134795 4134 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Ccdc3Q9D6Y1 Gm43508-201ENSMUST00000197251 3783 ntBASIC3.89□□□□□ -1.79
Ccdc3Q9D6Y1 Fbxo48-202ENSMUST00000109635 1098 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Ccdc3Q9D6Y1 Gm14605-201ENSMUST00000120599 268 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 99.3 ms