Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Gm29314-201ENSMUST00000186800 615 ntBASIC4.64□□□□□ -1.67
Vps28Q9D1C8 Gm9947-202ENSMUST00000187401 687 ntTSL 5 BASIC4.64□□□□□ -1.67
Vps28Q9D1C8 Gm28253-202ENSMUST00000187971 615 ntBASIC4.64□□□□□ -1.67
Vps28Q9D1C8 Gm29169-201ENSMUST00000189835 615 ntBASIC4.64□□□□□ -1.67
Vps28Q9D1C8 Gm29097-201ENSMUST00000190273 422 ntBASIC4.64□□□□□ -1.67
Vps28Q9D1C8 1700063I16Rik-201ENSMUST00000194611 611 ntBASIC4.64□□□□□ -1.67
Vps28Q9D1C8 Gm38216-201ENSMUST00000194872 1214 ntBASIC4.64□□□□□ -1.67
Vps28Q9D1C8 Gm43841-201ENSMUST00000199491 586 ntBASIC4.64□□□□□ -1.67
Vps28Q9D1C8 Olfr1498-ps1-201ENSMUST00000208721 991 ntBASIC4.64□□□□□ -1.67
Vps28Q9D1C8 AC159476.2-201ENSMUST00000216221 418 ntBASIC4.64□□□□□ -1.67
Vps28Q9D1C8 AC154239.2-201ENSMUST00000227859 233 ntBASIC4.64□□□□□ -1.67
Vps28Q9D1C8 Vmn1r24-202ENSMUST00000228315 891 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Vps28Q9D1C8 Olfr1123-201ENSMUST00000054974 972 ntAPPRIS P2 BASIC4.64□□□□□ -1.67
Vps28Q9D1C8 Krtap31-2-201ENSMUST00000058761 935 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Vps28Q9D1C8 Olfr25-201ENSMUST00000071449 1068 ntAPPRIS P2 BASIC4.64□□□□□ -1.67
Vps28Q9D1C8 Olfr776-201ENSMUST00000073704 939 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Vps28Q9D1C8 Olfr996-201ENSMUST00000077075 1068 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Vps28Q9D1C8 Olfr775-201ENSMUST00000097163 939 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Vps28Q9D1C8 Olfr774-201ENSMUST00000097164 939 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Vps28Q9D1C8 Tnfrsf26-202ENSMUST00000208124 3062 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Vps28Q9D1C8 Gm43888-201ENSMUST00000204405 2587 ntBASIC4.64□□□□□ -1.67
Vps28Q9D1C8 Usp9x-201ENSMUST00000089302 11887 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Vps28Q9D1C8 Olfr819-202ENSMUST00000216322 3930 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
Vps28Q9D1C8 Vmn1r39-203ENSMUST00000227285 2245 ntAPPRIS ALT2 BASIC4.64□□□□□ -1.67
Vps28Q9D1C8 Btla-201ENSMUST00000063654 3235 ntAPPRIS P4 TSL 1 (best) BASIC4.63□□□□□ -1.67
Vps28Q9D1C8 Ogt-201ENSMUST00000044475 5384 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
Vps28Q9D1C8 Ddx60-202ENSMUST00000093485 5989 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
Vps28Q9D1C8 Gm24840-201ENSMUST00000122603 147 ntBASIC4.63□□□□□ -1.67
Vps28Q9D1C8 1700061F12Rik-201ENSMUST00000132414 876 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Vps28Q9D1C8 Gm12195-201ENSMUST00000144990 469 ntTSL 3 BASIC4.63□□□□□ -1.67
Vps28Q9D1C8 Platr32-201ENSMUST00000148597 394 ntTSL 5 BASIC4.63□□□□□ -1.67
Vps28Q9D1C8 Gm5258-201ENSMUST00000165437 327 ntBASIC4.63□□□□□ -1.67
Vps28Q9D1C8 Zfp456-202ENSMUST00000172266 679 ntTSL 3 BASIC4.63□□□□□ -1.67
Vps28Q9D1C8 Gm18128-201ENSMUST00000172625 511 ntBASIC4.63□□□□□ -1.67
Vps28Q9D1C8 Olfr421-ps1-201ENSMUST00000179386 1050 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Vps28Q9D1C8 2900009J06Rik-201ENSMUST00000185310 498 ntTSL 2 BASIC4.63□□□□□ -1.67
Vps28Q9D1C8 2310030A07Rik-201ENSMUST00000186460 610 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Vps28Q9D1C8 Gm8641-201ENSMUST00000186995 826 ntBASIC4.63□□□□□ -1.67
Vps28Q9D1C8 Sprr2g-202ENSMUST00000189634 651 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Vps28Q9D1C8 1700020G17Rik-202ENSMUST00000190237 739 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Vps28Q9D1C8 1700023G09Rik-202ENSMUST00000194671 308 ntTSL 3 BASIC4.63□□□□□ -1.67
Vps28Q9D1C8 Gm33093-201ENSMUST00000197751 790 ntTSL 5 BASIC4.63□□□□□ -1.67
Vps28Q9D1C8 Gm44054-201ENSMUST00000203814 372 ntBASIC4.63□□□□□ -1.67
Vps28Q9D1C8 Gm44404-201ENSMUST00000203979 636 ntBASIC4.63□□□□□ -1.67
Vps28Q9D1C8 Gm33626-201ENSMUST00000206790 828 ntBASIC4.63□□□□□ -1.67
Vps28Q9D1C8 Olfr500-ps1-201ENSMUST00000208818 933 ntBASIC4.63□□□□□ -1.67
Vps28Q9D1C8 Gm9375-201ENSMUST00000208899 903 ntBASIC4.63□□□□□ -1.67
Vps28Q9D1C8 Gm45086-201ENSMUST00000209052 462 ntTSL 5 BASIC4.63□□□□□ -1.67
Vps28Q9D1C8 Sult2a7-203ENSMUST00000210034 870 ntTSL 5 BASIC4.63□□□□□ -1.67
Vps28Q9D1C8 Gm6303-201ENSMUST00000210123 471 ntBASIC4.63□□□□□ -1.67
Vps28Q9D1C8 Gm45498-201ENSMUST00000210346 283 ntBASIC4.63□□□□□ -1.67
Vps28Q9D1C8 Gm45392-201ENSMUST00000210441 214 ntBASIC4.63□□□□□ -1.67
Vps28Q9D1C8 Gm45499-201ENSMUST00000211656 280 ntBASIC4.63□□□□□ -1.67
Vps28Q9D1C8 Olfr1073-ps1-202ENSMUST00000215705 478 ntBASIC4.63□□□□□ -1.67
Vps28Q9D1C8 Gm46327-201ENSMUST00000218240 365 ntBASIC4.63□□□□□ -1.67
Vps28Q9D1C8 Olfr1291-ps1-202ENSMUST00000219064 897 ntBASIC4.63□□□□□ -1.67
Vps28Q9D1C8 AC130536.1-201ENSMUST00000224425 271 ntBASIC4.63□□□□□ -1.67
Vps28Q9D1C8 4930568D16Rik-201ENSMUST00000028243 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Vps28Q9D1C8 Hypm-201ENSMUST00000044987 581 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Vps28Q9D1C8 Sprr2g-201ENSMUST00000056590 650 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Vps28Q9D1C8 Tas2r136-201ENSMUST00000065532 984 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Vps28Q9D1C8 Mir504-201ENSMUST00000093602 79 ntBASIC4.63□□□□□ -1.67
Vps28Q9D1C8 Adam34-201ENSMUST00000110411 2584 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Vps28Q9D1C8 Gm43320-201ENSMUST00000196047 2916 ntBASIC4.63□□□□□ -1.67
Vps28Q9D1C8 Serpinb3a-201ENSMUST00000027567 1620 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Vps28Q9D1C8 Gm28940-201ENSMUST00000187929 1682 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Vps28Q9D1C8 Crisp2-201ENSMUST00000024724 1438 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Vps28Q9D1C8 Hnrnpr-207ENSMUST00000148843 21452 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Vps28Q9D1C8 Gm42583-201ENSMUST00000202678 6700 ntBASIC4.62□□□□□ -1.67
Vps28Q9D1C8 Zfp989-202ENSMUST00000146688 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Vps28Q9D1C8 Ms4a2-204ENSMUST00000186978 2391 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Vps28Q9D1C8 Nexn-212ENSMUST00000199470 2392 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
Vps28Q9D1C8 Olfr397-202ENSMUST00000213134 4048 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Vps28Q9D1C8 Mmp8-201ENSMUST00000018765 2425 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Vps28Q9D1C8 Zfp101-204ENSMUST00000174512 3743 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Vps28Q9D1C8 Mef2c-201ENSMUST00000005722 6217 ntTSL 5 BASIC4.62□□□□□ -1.67
Vps28Q9D1C8 Gm14806-201ENSMUST00000116606 2110 ntBASIC4.62□□□□□ -1.67
Vps28Q9D1C8 Gm14879-201ENSMUST00000117308 507 ntBASIC4.62□□□□□ -1.67
Vps28Q9D1C8 Klrd1-203ENSMUST00000119520 919 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
Vps28Q9D1C8 Gm5391-201ENSMUST00000121155 613 ntBASIC4.62□□□□□ -1.67
Vps28Q9D1C8 Olfr660-ps1-201ENSMUST00000121526 375 ntBASIC4.62□□□□□ -1.67
Vps28Q9D1C8 Gm14363-201ENSMUST00000122304 409 ntBASIC4.62□□□□□ -1.67
Vps28Q9D1C8 4930503B20Rik-203ENSMUST00000149825 970 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
Vps28Q9D1C8 Gm15200-201ENSMUST00000149950 410 ntTSL 2 BASIC4.62□□□□□ -1.67
Vps28Q9D1C8 1700019E08Rik-202ENSMUST00000153567 635 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Vps28Q9D1C8 1700058P15Rik-201ENSMUST00000159981 413 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Vps28Q9D1C8 D6Ertd474e-203ENSMUST00000160188 683 ntTSL 3 BASIC4.62□□□□□ -1.67
Vps28Q9D1C8 Gm17657-201ENSMUST00000168877 510 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Vps28Q9D1C8 Gm4181-201ENSMUST00000170249 898 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Vps28Q9D1C8 Vmn1r-ps65-201ENSMUST00000174235 951 ntBASIC4.62□□□□□ -1.67
Vps28Q9D1C8 Gm26992-201ENSMUST00000182089 468 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
Vps28Q9D1C8 Mir6393-201ENSMUST00000183709 94 ntBASIC4.62□□□□□ -1.67
Vps28Q9D1C8 Gm27165-201ENSMUST00000183951 232 ntBASIC4.62□□□□□ -1.67
Vps28Q9D1C8 Gm27875-201ENSMUST00000184425 123 ntBASIC4.62□□□□□ -1.67
Vps28Q9D1C8 A930005H10Rik-205ENSMUST00000187055 436 ntTSL 3 BASIC4.62□□□□□ -1.67
Vps28Q9D1C8 Gm28136-206ENSMUST00000189800 1104 ntTSL 5 BASIC4.62□□□□□ -1.67
Vps28Q9D1C8 Gm29130-201ENSMUST00000191015 618 ntTSL 5 BASIC4.62□□□□□ -1.67
Vps28Q9D1C8 Gm32391-201ENSMUST00000191839 540 ntTSL 2 BASIC4.62□□□□□ -1.67
Vps28Q9D1C8 Gm37209-201ENSMUST00000194109 1276 ntBASIC4.62□□□□□ -1.67
Vps28Q9D1C8 Gm38098-201ENSMUST00000194115 241 ntBASIC4.62□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms