Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Carf-209ENSMUST00000187978 5463 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
Cdh23Q99PF4 Naip6-202ENSMUST00000118574 6827 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Cdh23Q99PF4 4933400A11Rik-203ENSMUST00000112102 1101 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Cdh23Q99PF4 Gm15387-201ENSMUST00000120421 648 ntBASIC3.69□□□□□ -1.82
Cdh23Q99PF4 Gm15522-201ENSMUST00000134467 785 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Cdh23Q99PF4 Hmgb1-ps7-201ENSMUST00000173370 648 ntBASIC3.69□□□□□ -1.82
Cdh23Q99PF4 Gm44399-201ENSMUST00000205043 226 ntBASIC3.69□□□□□ -1.82
Cdh23Q99PF4 Gm17917-201ENSMUST00000218561 953 ntBASIC3.69□□□□□ -1.82
Cdh23Q99PF4 Hspe1-ps1-201ENSMUST00000222955 330 ntBASIC3.69□□□□□ -1.82
Cdh23Q99PF4 Gm5518-201ENSMUST00000084171 648 ntBASIC3.69□□□□□ -1.82
Cdh23Q99PF4 Kif20b-201ENSMUST00000087341 5564 ntAPPRIS P2 TSL 5 BASIC3.69□□□□□ -1.82
Cdh23Q99PF4 Gm43887-201ENSMUST00000204727 3186 ntBASIC3.69□□□□□ -1.82
Cdh23Q99PF4 Olfr267-202ENSMUST00000216719 4050 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Cdh23Q99PF4 Gm14062-201ENSMUST00000134795 4134 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Cdh23Q99PF4 Hspb11-202ENSMUST00000106749 607 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Cdh23Q99PF4 Gm13787-201ENSMUST00000120422 168 ntBASIC3.68□□□□□ -1.82
Cdh23Q99PF4 Gm10057-201ENSMUST00000144098 984 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
Cdh23Q99PF4 1700010H22Rik-202ENSMUST00000187592 1003 ntTSL 5 BASIC3.68□□□□□ -1.82
Cdh23Q99PF4 Cyp2b26-ps-201ENSMUST00000206238 1090 ntBASIC3.68□□□□□ -1.82
Cdh23Q99PF4 Cfap54-211ENSMUST00000212902 9516 ntAPPRIS P5 TSL 1 (best) BASIC3.68□□□□□ -1.82
Cdh23Q99PF4 Cnr1-202ENSMUST00000084736 5761 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
Cdh23Q99PF4 Ehf-201ENSMUST00000090475 4469 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Cdh23Q99PF4 Robo2-210ENSMUST00000226478 8059 ntBASIC3.68□□□□□ -1.82
Cdh23Q99PF4 Gm13630-201ENSMUST00000127849 3650 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Cdh23Q99PF4 Gnpnat1-206ENSMUST00000227468 1490 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Cdh23Q99PF4 Nsa2-201ENSMUST00000073456 2700 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Cdh23Q99PF4 Mir292-201ENSMUST00000104847 82 ntBASIC3.68□□□□□ -1.82
Cdh23Q99PF4 Gm18342-201ENSMUST00000186987 694 ntBASIC3.68□□□□□ -1.82
Cdh23Q99PF4 Gm36816-202ENSMUST00000205197 504 ntTSL 5 BASIC3.68□□□□□ -1.82
Cdh23Q99PF4 Gm30198-201ENSMUST00000222873 824 ntTSL 2 BASIC3.68□□□□□ -1.82
Cdh23Q99PF4 Olfr1325-201ENSMUST00000054541 948 ntAPPRIS P2 BASIC3.68□□□□□ -1.82
Cdh23Q99PF4 Gm23615-201ENSMUST00000082602 65 ntBASIC3.68□□□□□ -1.82
Cdh23Q99PF4 Gm7754-201ENSMUST00000223075 2064 ntBASIC3.68□□□□□ -1.82
Cdh23Q99PF4 Olfr982-201ENSMUST00000054051 5576 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Cdh23Q99PF4 Pola1-201ENSMUST00000006856 5346 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Cdh23Q99PF4 Akap13-201ENSMUST00000166315 12543 ntAPPRIS P2 TSL 5 BASIC3.68□□□□□ -1.82
Cdh23Q99PF4 Fancb-201ENSMUST00000057150 2422 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
Cdh23Q99PF4 Gm4064-201ENSMUST00000187482 1561 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Cdh23Q99PF4 Gm38093-201ENSMUST00000195210 710 ntTSL 3 BASIC3.68□□□□□ -1.82
Cdh23Q99PF4 AC091783.4-201ENSMUST00000224940 611 ntBASIC3.68□□□□□ -1.82
Cdh23Q99PF4 CT025548.1-201ENSMUST00000227459 257 ntBASIC3.68□□□□□ -1.82
Cdh23Q99PF4 Ktn1-210ENSMUST00000187839 7945 ntAPPRIS P3 TSL 5 BASIC3.68□□□□□ -1.82
Cdh23Q99PF4 Gm43300-201ENSMUST00000198540 2043 ntBASIC3.67□□□□□ -1.82
Cdh23Q99PF4 Olfr644-203ENSMUST00000213991 3506 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Cdh23Q99PF4 Zzz3-203ENSMUST00000106101 7539 ntAPPRIS P3 TSL 5 BASIC3.67□□□□□ -1.82
Cdh23Q99PF4 4930444F02Rik-201ENSMUST00000215429 6871 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Cdh23Q99PF4 Mef2c-202ENSMUST00000163888 6277 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Cdh23Q99PF4 Gm8681-201ENSMUST00000219115 618 ntBASIC3.67□□□□□ -1.82
Cdh23Q99PF4 1700024I08Rik-203ENSMUST00000222372 754 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Cdh23Q99PF4 AC130477.2-201ENSMUST00000228158 274 ntBASIC3.67□□□□□ -1.82
Cdh23Q99PF4 Olfr744-201ENSMUST00000066457 1105 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Cdh23Q99PF4 Olfr847-201ENSMUST00000079620 939 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Cdh23Q99PF4 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Cdh23Q99PF4 Gm43829-201ENSMUST00000196191 3802 ntBASIC3.67□□□□□ -1.82
Cdh23Q99PF4 Gm31592-201ENSMUST00000217529 3471 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Cdh23Q99PF4 Dennd4c-204ENSMUST00000142837 5870 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
Cdh23Q99PF4 Cnot7-203ENSMUST00000132032 2542 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Cdh23Q99PF4 Trav6-7-dv9-201ENSMUST00000103638 379 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Cdh23Q99PF4 Gm13873-201ENSMUST00000119208 427 ntBASIC3.67□□□□□ -1.82
Cdh23Q99PF4 Gm14788-201ENSMUST00000119457 375 ntBASIC3.67□□□□□ -1.82
Cdh23Q99PF4 Gm24681-201ENSMUST00000158760 107 ntBASIC3.67□□□□□ -1.82
Cdh23Q99PF4 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC3.67□□□□□ -1.82
Cdh23Q99PF4 Gm29318-201ENSMUST00000185308 975 ntTSL 5 BASIC3.67□□□□□ -1.82
Cdh23Q99PF4 Gm42468-201ENSMUST00000200360 703 ntTSL 3 BASIC3.67□□□□□ -1.82
Cdh23Q99PF4 Olfr746-201ENSMUST00000080616 945 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Cdh23Q99PF4 Olfr591-202ENSMUST00000216581 4802 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Cdh23Q99PF4 Slfn8-203ENSMUST00000108152 3083 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Cdh23Q99PF4 Trav8d-2-201ENSMUST00000103605 334 ntAPPRIS ALT2 BASIC3.66□□□□□ -1.82
Cdh23Q99PF4 Gm12311-201ENSMUST00000118803 374 ntBASIC3.66□□□□□ -1.82
Cdh23Q99PF4 Hba-ps4-201ENSMUST00000128900 447 ntBASIC3.66□□□□□ -1.82
Cdh23Q99PF4 Gm4468-201ENSMUST00000170206 294 ntBASIC3.66□□□□□ -1.82
Cdh23Q99PF4 Gm17224-201ENSMUST00000171429 500 ntTSL 3 BASIC3.66□□□□□ -1.82
Cdh23Q99PF4 Gm29062-201ENSMUST00000186032 694 ntBASIC3.66□□□□□ -1.82
Cdh23Q99PF4 Gm29259-201ENSMUST00000186396 694 ntBASIC3.66□□□□□ -1.82
Cdh23Q99PF4 Gm28255-201ENSMUST00000187101 694 ntBASIC3.66□□□□□ -1.82
Cdh23Q99PF4 2610044O15Rik8-203ENSMUST00000188757 413 ntTSL 2 BASIC3.66□□□□□ -1.82
Cdh23Q99PF4 Gm29545-201ENSMUST00000188878 694 ntBASIC3.66□□□□□ -1.82
Cdh23Q99PF4 Gm43521-201ENSMUST00000197838 255 ntBASIC3.66□□□□□ -1.82
Cdh23Q99PF4 Gm43107-201ENSMUST00000198729 255 ntBASIC3.66□□□□□ -1.82
Cdh23Q99PF4 Olfr926-201ENSMUST00000078289 1051 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Cdh23Q99PF4 Fras1-201ENSMUST00000036019 15848 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Cdh23Q99PF4 Cd28-201ENSMUST00000027165 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Cdh23Q99PF4 Olfr843-203ENSMUST00000214267 7071 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Cdh23Q99PF4 Olfr344-202ENSMUST00000215879 7675 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Cdh23Q99PF4 Ssxb9-201ENSMUST00000115584 879 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Cdh23Q99PF4 Gm15057-201ENSMUST00000121516 534 ntBASIC3.66□□□□□ -1.82
Cdh23Q99PF4 Gm11349-201ENSMUST00000122209 1116 ntBASIC3.66□□□□□ -1.82
Cdh23Q99PF4 Gm23115-201ENSMUST00000158480 108 ntBASIC3.66□□□□□ -1.82
Cdh23Q99PF4 Gm18445-201ENSMUST00000195502 774 ntBASIC3.66□□□□□ -1.82
Cdh23Q99PF4 n-TSaga9-201ENSMUST00000197675 107 ntBASIC3.66□□□□□ -1.82
Cdh23Q99PF4 Olfr536-205ENSMUST00000215768 4231 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Cdh23Q99PF4 Ssxb1-201ENSMUST00000037297 875 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Cdh23Q99PF4 Gm28044-201ENSMUST00000044819 551 ntAPPRIS P1 TSL 3 BASIC3.66□□□□□ -1.82
Cdh23Q99PF4 Pum2-216ENSMUST00000178015 5874 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
Cdh23Q99PF4 Abca15-202ENSMUST00000121265 5335 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
Cdh23Q99PF4 Abca15-201ENSMUST00000076272 5335 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
Cdh23Q99PF4 Gm13762-201ENSMUST00000144908 2612 ntAPPRIS P1 TSL 3 BASIC3.66□□□□□ -1.82
Cdh23Q99PF4 Spag9-203ENSMUST00000075695 6910 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Cdh23Q99PF4 Ankrd17-205ENSMUST00000197021 8067 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
Cdh23Q99PF4 Olfr1101-202ENSMUST00000214411 3235 ntAPPRIS P1 TSL 3 BASIC3.66□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 72.9 ms