Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Gm28891-202ENSMUST00000189333 927 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Ccdc38Q8CDN8 Gm21094-202ENSMUST00000189577 926 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Ccdc38Q8CDN8 Gm20792-201ENSMUST00000189765 931 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Ccdc38Q8CDN8 Gm28919-201ENSMUST00000190026 920 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Ccdc38Q8CDN8 Gm21861-202ENSMUST00000190806 931 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Ccdc38Q8CDN8 Gm20819-201ENSMUST00000191091 925 ntBASIC4.68□□□□□ -1.66
Ccdc38Q8CDN8 Gm20871-201ENSMUST00000191322 931 ntBASIC4.68□□□□□ -1.66
Ccdc38Q8CDN8 Gm21865-202ENSMUST00000191443 923 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Ccdc38Q8CDN8 Gm30737-201ENSMUST00000192683 923 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Ccdc38Q8CDN8 Gm38250-201ENSMUST00000192691 766 ntTSL 3 BASIC4.68□□□□□ -1.66
Ccdc38Q8CDN8 Gm35134-201ENSMUST00000194086 923 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Ccdc38Q8CDN8 Gm42610-201ENSMUST00000196557 650 ntTSL 3 BASIC4.68□□□□□ -1.66
Ccdc38Q8CDN8 Gm42695-201ENSMUST00000199445 818 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Ccdc38Q8CDN8 Gm20177-201ENSMUST00000203705 334 ntBASIC4.68□□□□□ -1.66
Ccdc38Q8CDN8 Gm34224-201ENSMUST00000204606 364 ntBASIC4.68□□□□□ -1.66
Ccdc38Q8CDN8 Gm21885-202ENSMUST00000208510 775 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Ccdc38Q8CDN8 Gm36371-201ENSMUST00000209043 1103 ntBASIC4.68□□□□□ -1.66
Ccdc38Q8CDN8 AC158686.2-201ENSMUST00000218599 976 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Ccdc38Q8CDN8 Gm17820-201ENSMUST00000220213 1068 ntBASIC4.68□□□□□ -1.66
Ccdc38Q8CDN8 Selenok-ps6-201ENSMUST00000221812 283 ntBASIC4.68□□□□□ -1.66
Ccdc38Q8CDN8 Olfr866-201ENSMUST00000062248 1077 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Ccdc38Q8CDN8 Cysltr1-202ENSMUST00000113480 5142 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Ccdc38Q8CDN8 Cnot6l-202ENSMUST00000113005 3170 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
Ccdc38Q8CDN8 Fbxw14-201ENSMUST00000112041 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
Ccdc38Q8CDN8 Gm8104-201ENSMUST00000168165 1761 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Ccdc38Q8CDN8 Ddx60-201ENSMUST00000070631 6535 ntAPPRIS P2 TSL 5 BASIC4.68□□□□□ -1.66
Ccdc38Q8CDN8 Olfr887-202ENSMUST00000212502 6281 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Ccdc38Q8CDN8 Olfr365-203ENSMUST00000218602 5374 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Ccdc38Q8CDN8 Gm37298-201ENSMUST00000193770 3868 ntBASIC4.67□□□□□ -1.66
Ccdc38Q8CDN8 Gm38104-201ENSMUST00000195121 1895 ntBASIC4.67□□□□□ -1.66
Ccdc38Q8CDN8 Gm45848-201ENSMUST00000212932 1871 ntTSL 5 BASIC4.67□□□□□ -1.66
Ccdc38Q8CDN8 Jmjd1c-206ENSMUST00000173689 8609 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
Ccdc38Q8CDN8 Kctd12b-202ENSMUST00000112572 4851 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Ccdc38Q8CDN8 Gm3683-201ENSMUST00000175701 2513 ntBASIC4.67□□□□□ -1.66
Ccdc38Q8CDN8 Gm26367-201ENSMUST00000104165 132 ntBASIC4.67□□□□□ -1.66
Ccdc38Q8CDN8 Xlr5a-202ENSMUST00000114520 867 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
Ccdc38Q8CDN8 Gm8666-201ENSMUST00000117517 292 ntBASIC4.67□□□□□ -1.66
Ccdc38Q8CDN8 Gm11483-201ENSMUST00000119839 247 ntBASIC4.67□□□□□ -1.66
Ccdc38Q8CDN8 Gm14435-202ENSMUST00000127687 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
Ccdc38Q8CDN8 Gm13335-201ENSMUST00000129994 471 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Ccdc38Q8CDN8 4931428L18Rik-202ENSMUST00000135245 889 ntAPPRIS P5 TSL 1 (best) BASIC4.67□□□□□ -1.66
Ccdc38Q8CDN8 Gm23465-201ENSMUST00000157134 262 ntBASIC4.67□□□□□ -1.66
Ccdc38Q8CDN8 Gm21232-201ENSMUST00000182187 1006 ntBASIC4.67□□□□□ -1.66
Ccdc38Q8CDN8 Gm28439-201ENSMUST00000187714 876 ntBASIC4.67□□□□□ -1.66
Ccdc38Q8CDN8 Gm20812-202ENSMUST00000189550 1230 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Ccdc38Q8CDN8 4930487D11Rik-201ENSMUST00000201983 295 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Ccdc38Q8CDN8 Gm44079-201ENSMUST00000204889 529 ntTSL 5 BASIC4.67□□□□□ -1.66
Ccdc38Q8CDN8 Gm45081-201ENSMUST00000206281 572 ntBASIC4.67□□□□□ -1.66
Ccdc38Q8CDN8 Gm44972-201ENSMUST00000206419 406 ntBASIC4.67□□□□□ -1.66
Ccdc38Q8CDN8 Gm32817-201ENSMUST00000210007 689 ntTSL 5 BASIC4.67□□□□□ -1.66
Ccdc38Q8CDN8 Gm16381-201ENSMUST00000220528 503 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Ccdc38Q8CDN8 Gm2001-201ENSMUST00000223236 503 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Ccdc38Q8CDN8 CU024892.1-201ENSMUST00000224869 515 ntBASIC4.67□□□□□ -1.66
Ccdc38Q8CDN8 AC158388.1-201ENSMUST00000225441 256 ntBASIC4.67□□□□□ -1.66
Ccdc38Q8CDN8 Gm15421-201ENSMUST00000051985 443 ntTSL 3 BASIC4.67□□□□□ -1.66
Ccdc38Q8CDN8 BC023105-201ENSMUST00000073997 1227 ntBASIC4.67□□□□□ -1.66
Ccdc38Q8CDN8 Olfr830-201ENSMUST00000078861 948 ntAPPRIS P2 BASIC4.67□□□□□ -1.66
Ccdc38Q8CDN8 n-R5s151-201ENSMUST00000083959 119 ntBASIC4.67□□□□□ -1.66
Ccdc38Q8CDN8 Gm43320-201ENSMUST00000196047 2916 ntBASIC4.67□□□□□ -1.66
Ccdc38Q8CDN8 AC131720.1-201ENSMUST00000218629 2132 ntBASIC4.67□□□□□ -1.66
Ccdc38Q8CDN8 AI314180-203ENSMUST00000107557 4946 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
Ccdc38Q8CDN8 Gm42486-201ENSMUST00000200369 3486 ntBASIC4.67□□□□□ -1.66
Ccdc38Q8CDN8 Fgd4-206ENSMUST00000161861 8342 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Ccdc38Q8CDN8 Nxt2-202ENSMUST00000112913 2538 ntTSL 3 BASIC4.67□□□□□ -1.66
Ccdc38Q8CDN8 AC152162.1-201ENSMUST00000225910 2917 ntBASIC4.66□□□□□ -1.66
Ccdc38Q8CDN8 Rtl4-201ENSMUST00000096301 1758 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Ccdc38Q8CDN8 n-R5s52-201ENSMUST00000104614 113 ntBASIC4.66□□□□□ -1.66
Ccdc38Q8CDN8 Gm22194-201ENSMUST00000116869 95 ntBASIC4.66□□□□□ -1.66
Ccdc38Q8CDN8 Gm15560-201ENSMUST00000117107 643 ntBASIC4.66□□□□□ -1.66
Ccdc38Q8CDN8 Gm13733-201ENSMUST00000117290 535 ntBASIC4.66□□□□□ -1.66
Ccdc38Q8CDN8 Gm8475-201ENSMUST00000118211 526 ntBASIC4.66□□□□□ -1.66
Ccdc38Q8CDN8 Gm13478-201ENSMUST00000118312 413 ntBASIC4.66□□□□□ -1.66
Ccdc38Q8CDN8 Gm12001-201ENSMUST00000121727 913 ntBASIC4.66□□□□□ -1.66
Ccdc38Q8CDN8 Gm14559-201ENSMUST00000121745 496 ntBASIC4.66□□□□□ -1.66
Ccdc38Q8CDN8 Gm2892-201ENSMUST00000145537 711 ntBASIC4.66□□□□□ -1.66
Ccdc38Q8CDN8 Gm13348-201ENSMUST00000147324 690 ntTSL 5 BASIC4.66□□□□□ -1.66
Ccdc38Q8CDN8 4930441J16Rik-201ENSMUST00000153743 516 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Ccdc38Q8CDN8 Gm24898-201ENSMUST00000158133 106 ntBASIC4.66□□□□□ -1.66
Ccdc38Q8CDN8 Gm25655-201ENSMUST00000158465 290 ntBASIC4.66□□□□□ -1.66
Ccdc38Q8CDN8 Gm16303-201ENSMUST00000161498 390 ntBASIC4.66□□□□□ -1.66
Ccdc38Q8CDN8 Bhlhe40-202ENSMUST00000163617 476 ntTSL 2 BASIC4.66□□□□□ -1.66
Ccdc38Q8CDN8 Malat1-202ENSMUST00000173314 556 ntTSL 3 BASIC4.66□□□□□ -1.66
Ccdc38Q8CDN8 Olfr296-ps1-201ENSMUST00000173904 1102 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Ccdc38Q8CDN8 Vmn1r181-201ENSMUST00000181796 1080 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Ccdc38Q8CDN8 Gm27899-201ENSMUST00000184715 64 ntBASIC4.66□□□□□ -1.66
Ccdc38Q8CDN8 Gm29277-201ENSMUST00000185226 602 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Ccdc38Q8CDN8 Gm29089-201ENSMUST00000186209 602 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Ccdc38Q8CDN8 1700029E06Rik-201ENSMUST00000189036 757 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Ccdc38Q8CDN8 Gm37193-201ENSMUST00000193087 513 ntBASIC4.66□□□□□ -1.66
Ccdc38Q8CDN8 Gm44145-201ENSMUST00000203711 172 ntTSL 3 BASIC4.66□□□□□ -1.66
Ccdc38Q8CDN8 Gm8132-201ENSMUST00000204938 640 ntBASIC4.66□□□□□ -1.66
Ccdc38Q8CDN8 1700065L07Rik-201ENSMUST00000204961 614 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Ccdc38Q8CDN8 Olfr1488-ps1-201ENSMUST00000207436 136 ntBASIC4.66□□□□□ -1.66
Ccdc38Q8CDN8 Gm45072-201ENSMUST00000208673 929 ntBASIC4.66□□□□□ -1.66
Ccdc38Q8CDN8 Gm20586-201ENSMUST00000210122 547 ntBASIC4.66□□□□□ -1.66
Ccdc38Q8CDN8 AC138401.2-201ENSMUST00000220461 365 ntBASIC4.66□□□□□ -1.66
Ccdc38Q8CDN8 AC168881.1-201ENSMUST00000226018 430 ntBASIC4.66□□□□□ -1.66
Ccdc38Q8CDN8 Olfr186-201ENSMUST00000062380 1005 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Ccdc38Q8CDN8 Olfr1148-201ENSMUST00000077580 945 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Ccdc38Q8CDN8 Gm29260-201ENSMUST00000186391 2759 ntTSL 3 BASIC4.66□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 98.7 ms