Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Gm3160-201ENSMUST00000128343 607 ntBASIC4.06□□□□□ -1.76
Lrif1Q8CDD9 Gm15735-201ENSMUST00000136187 514 ntTSL 3 BASIC4.06□□□□□ -1.76
Lrif1Q8CDD9 Gm23231-201ENSMUST00000157299 104 ntBASIC4.06□□□□□ -1.76
Lrif1Q8CDD9 Gm17109-201ENSMUST00000163985 358 ntBASIC4.06□□□□□ -1.76
Lrif1Q8CDD9 Vmn2r-ps59-201ENSMUST00000174596 135 ntBASIC4.06□□□□□ -1.76
Lrif1Q8CDD9 Gm27864-201ENSMUST00000183704 190 ntBASIC4.06□□□□□ -1.76
Lrif1Q8CDD9 4930533P14Rik-201ENSMUST00000189056 583 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Lrif1Q8CDD9 2610001A08Rik-201ENSMUST00000193315 867 ntBASIC4.06□□□□□ -1.76
Lrif1Q8CDD9 Gm38080-201ENSMUST00000194035 268 ntBASIC4.06□□□□□ -1.76
Lrif1Q8CDD9 Gm36985-201ENSMUST00000195595 379 ntBASIC4.06□□□□□ -1.76
Lrif1Q8CDD9 Gm5876-201ENSMUST00000203735 243 ntBASIC4.06□□□□□ -1.76
Lrif1Q8CDD9 Gm44371-201ENSMUST00000204148 467 ntBASIC4.06□□□□□ -1.76
Lrif1Q8CDD9 Gm38991-201ENSMUST00000205504 138 ntTSL 5 BASIC4.06□□□□□ -1.76
Lrif1Q8CDD9 Gm8556-201ENSMUST00000210437 664 ntBASIC4.06□□□□□ -1.76
Lrif1Q8CDD9 Olfr840-ps1-201ENSMUST00000211827 917 ntBASIC4.06□□□□□ -1.76
Lrif1Q8CDD9 Gm18377-201ENSMUST00000215141 607 ntBASIC4.06□□□□□ -1.76
Lrif1Q8CDD9 Olfr1119-ps1-201ENSMUST00000215282 634 ntBASIC4.06□□□□□ -1.76
Lrif1Q8CDD9 AC153526.4-201ENSMUST00000217713 379 ntBASIC4.06□□□□□ -1.76
Lrif1Q8CDD9 AC138401.2-201ENSMUST00000220461 365 ntBASIC4.06□□□□□ -1.76
Lrif1Q8CDD9 CR974429.1-201ENSMUST00000220877 827 ntBASIC4.06□□□□□ -1.76
Lrif1Q8CDD9 AC122924.1-201ENSMUST00000222044 163 ntBASIC4.06□□□□□ -1.76
Lrif1Q8CDD9 AC119241.1-201ENSMUST00000223651 534 ntBASIC4.06□□□□□ -1.76
Lrif1Q8CDD9 Olfr969-201ENSMUST00000074566 936 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Lrif1Q8CDD9 Gm15226-201ENSMUST00000156526 2971 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Lrif1Q8CDD9 Gm4788-201ENSMUST00000027612 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
Lrif1Q8CDD9 Cfh-203ENSMUST00000111977 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
Lrif1Q8CDD9 Cd53-201ENSMUST00000038845 1742 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Lrif1Q8CDD9 AI314180-203ENSMUST00000107557 4946 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
Lrif1Q8CDD9 Cd86-201ENSMUST00000089620 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Lrif1Q8CDD9 Zfp981-201ENSMUST00000105735 3038 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
Lrif1Q8CDD9 Gm27162-201ENSMUST00000185169 2478 ntTSL 2 BASIC4.05□□□□□ -1.76
Lrif1Q8CDD9 Ocrl-202ENSMUST00000115013 2910 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Lrif1Q8CDD9 Olfr1270-206ENSMUST00000217139 4803 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Lrif1Q8CDD9 Mmp1b-201ENSMUST00000047888 1449 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Lrif1Q8CDD9 Gm38104-201ENSMUST00000195121 1895 ntBASIC4.05□□□□□ -1.76
Lrif1Q8CDD9 Vmn2r30-202ENSMUST00000174368 3688 ntTSL 2 BASIC4.05□□□□□ -1.76
Lrif1Q8CDD9 Gm13762-201ENSMUST00000144908 2612 ntAPPRIS P1 TSL 3 BASIC4.05□□□□□ -1.76
Lrif1Q8CDD9 Olfr1242-204ENSMUST00000216001 2569 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Lrif1Q8CDD9 Tenm1-202ENSMUST00000115058 12837 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
Lrif1Q8CDD9 Rpl23a-201ENSMUST00000102483 560 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Lrif1Q8CDD9 Igkv6-32-201ENSMUST00000103377 366 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Lrif1Q8CDD9 Gm26367-201ENSMUST00000104165 132 ntBASIC4.05□□□□□ -1.76
Lrif1Q8CDD9 Gm12448-201ENSMUST00000118852 655 ntBASIC4.05□□□□□ -1.76
Lrif1Q8CDD9 Amd-ps1-201ENSMUST00000120127 994 ntBASIC4.05□□□□□ -1.76
Lrif1Q8CDD9 Rpl27-ps2-201ENSMUST00000120378 399 ntBASIC4.05□□□□□ -1.76
Lrif1Q8CDD9 Gm10444-201ENSMUST00000126708 148 ntBASIC4.05□□□□□ -1.76
Lrif1Q8CDD9 Gm11579-201ENSMUST00000145502 845 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Lrif1Q8CDD9 Platr3-201ENSMUST00000146980 412 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Lrif1Q8CDD9 Gm22637-201ENSMUST00000158144 283 ntBASIC4.05□□□□□ -1.76
Lrif1Q8CDD9 Gm24939-201ENSMUST00000158325 137 ntBASIC4.05□□□□□ -1.76
Lrif1Q8CDD9 Gm16571-201ENSMUST00000159112 291 ntBASIC4.05□□□□□ -1.76
Lrif1Q8CDD9 Gm9376-201ENSMUST00000171107 729 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Lrif1Q8CDD9 Mir6715-201ENSMUST00000184990 57 ntBASIC4.05□□□□□ -1.76
Lrif1Q8CDD9 Gm38108-201ENSMUST00000193891 399 ntTSL 5 BASIC4.05□□□□□ -1.76
Lrif1Q8CDD9 Trdv3-201ENSMUST00000198551 309 ntBASIC4.05□□□□□ -1.76
Lrif1Q8CDD9 Gm4734-201ENSMUST00000200117 777 ntBASIC4.05□□□□□ -1.76
Lrif1Q8CDD9 C78283-201ENSMUST00000202711 848 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Lrif1Q8CDD9 Olfr1488-ps1-201ENSMUST00000207436 136 ntBASIC4.05□□□□□ -1.76
Lrif1Q8CDD9 Gm18462-201ENSMUST00000208112 417 ntBASIC4.05□□□□□ -1.76
Lrif1Q8CDD9 Gm44946-201ENSMUST00000208425 572 ntBASIC4.05□□□□□ -1.76
Lrif1Q8CDD9 Gm17989-201ENSMUST00000211543 412 ntBASIC4.05□□□□□ -1.76
Lrif1Q8CDD9 Gm45735-201ENSMUST00000212779 319 ntBASIC4.05□□□□□ -1.76
Lrif1Q8CDD9 Olfr1180-203ENSMUST00000217320 2107 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Lrif1Q8CDD9 AC140930.4-201ENSMUST00000220750 150 ntBASIC4.05□□□□□ -1.76
Lrif1Q8CDD9 Gm34215-202ENSMUST00000223024 492 ntTSL 5 BASIC4.05□□□□□ -1.76
Lrif1Q8CDD9 Gm30409-201ENSMUST00000223302 229 ntTSL 3 BASIC4.05□□□□□ -1.76
Lrif1Q8CDD9 AC137961.1-201ENSMUST00000227924 734 ntBASIC4.05□□□□□ -1.76
Lrif1Q8CDD9 AC151907.1-201ENSMUST00000228812 412 ntBASIC4.05□□□□□ -1.76
Lrif1Q8CDD9 Olfr1112-201ENSMUST00000053050 957 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Lrif1Q8CDD9 Gm25739-201ENSMUST00000082886 107 ntBASIC4.05□□□□□ -1.76
Lrif1Q8CDD9 n-R5s151-201ENSMUST00000083959 119 ntBASIC4.05□□□□□ -1.76
Lrif1Q8CDD9 2410024N13Rik-201ENSMUST00000090704 669 ntBASIC4.05□□□□□ -1.76
Lrif1Q8CDD9 Vmn1r203-201ENSMUST00000091729 936 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Lrif1Q8CDD9 Olfr993-201ENSMUST00000099926 945 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Lrif1Q8CDD9 Ktn1-201ENSMUST00000022391 4484 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
Lrif1Q8CDD9 Slc22a28-201ENSMUST00000065651 2004 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Lrif1Q8CDD9 C230031I18Rik-201ENSMUST00000197856 3698 ntBASIC4.05□□□□□ -1.76
Lrif1Q8CDD9 Olfr510-203ENSMUST00000216331 3101 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Lrif1Q8CDD9 Olfr706-202ENSMUST00000213918 4828 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Lrif1Q8CDD9 Gm11673-201ENSMUST00000117846 331 ntBASIC4.04□□□□□ -1.76
Lrif1Q8CDD9 Gm13550-201ENSMUST00000118185 525 ntBASIC4.04□□□□□ -1.76
Lrif1Q8CDD9 Gm12994-201ENSMUST00000119601 447 ntBASIC4.04□□□□□ -1.76
Lrif1Q8CDD9 Gm13737-201ENSMUST00000119793 232 ntBASIC4.04□□□□□ -1.76
Lrif1Q8CDD9 Gm12880-201ENSMUST00000120652 494 ntBASIC4.04□□□□□ -1.76
Lrif1Q8CDD9 Gm13788-201ENSMUST00000120767 601 ntBASIC4.04□□□□□ -1.76
Lrif1Q8CDD9 Gm5379-201ENSMUST00000120973 826 ntBASIC4.04□□□□□ -1.76
Lrif1Q8CDD9 Gm15517-201ENSMUST00000124863 251 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Lrif1Q8CDD9 6030471H07Rik-201ENSMUST00000125884 492 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Lrif1Q8CDD9 Gm13371-201ENSMUST00000137756 469 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Lrif1Q8CDD9 Gm23905-201ENSMUST00000157568 109 ntBASIC4.04□□□□□ -1.76
Lrif1Q8CDD9 Gm17416-201ENSMUST00000163724 201 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Lrif1Q8CDD9 Vmn1r173-201ENSMUST00000174055 942 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Lrif1Q8CDD9 Gm27896-201ENSMUST00000175162 317 ntBASIC4.04□□□□□ -1.76
Lrif1Q8CDD9 Mir3473c-201ENSMUST00000175262 81 ntBASIC4.04□□□□□ -1.76
Lrif1Q8CDD9 Rab26os-202ENSMUST00000176921 298 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Lrif1Q8CDD9 Mir6899-201ENSMUST00000184798 64 ntBASIC4.04□□□□□ -1.76
Lrif1Q8CDD9 Ms4a2-205ENSMUST00000189641 647 ntTSL 3 BASIC4.04□□□□□ -1.76
Lrif1Q8CDD9 Gm17790-201ENSMUST00000191545 1228 ntBASIC4.04□□□□□ -1.76
Lrif1Q8CDD9 Trbv28-201ENSMUST00000192804 264 ntBASIC4.04□□□□□ -1.76
Lrif1Q8CDD9 Hcfc1r1-ps2-201ENSMUST00000199379 339 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 77.9 ms