Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Hfm1-202ENSMUST00000117588 4870 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Ccdc60Q8C4J0 Glra3-201ENSMUST00000000275 6508 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Ccdc60Q8C4J0 Mmrn1-203ENSMUST00000204333 4472 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Ccdc60Q8C4J0 Gm29325-201ENSMUST00000190705 2528 ntBASIC4.81□□□□□ -1.64
Ccdc60Q8C4J0 Gm43834-201ENSMUST00000197097 4830 ntBASIC4.81□□□□□ -1.64
Ccdc60Q8C4J0 Nufip2-201ENSMUST00000100802 5158 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Ccdc60Q8C4J0 Cyp4b1-ps2-201ENSMUST00000119563 333 ntBASIC4.81□□□□□ -1.64
Ccdc60Q8C4J0 Gm13307-201ENSMUST00000141375 493 ntTSL 5 BASIC4.81□□□□□ -1.64
Ccdc60Q8C4J0 Gm23959-201ENSMUST00000157208 324 ntBASIC4.81□□□□□ -1.64
Ccdc60Q8C4J0 Gm16303-201ENSMUST00000161498 390 ntBASIC4.81□□□□□ -1.64
Ccdc60Q8C4J0 C130026I21Rik-207ENSMUST00000162421 591 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Ccdc60Q8C4J0 Gm3646-201ENSMUST00000171319 352 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Ccdc60Q8C4J0 Gm21816-201ENSMUST00000179255 360 ntBASIC4.81□□□□□ -1.64
Ccdc60Q8C4J0 Mir7676-1-201ENSMUST00000183491 62 ntBASIC4.81□□□□□ -1.64
Ccdc60Q8C4J0 Otx2os1-201ENSMUST00000183522 866 ntTSL 3 BASIC4.81□□□□□ -1.64
Ccdc60Q8C4J0 Mir7676-2-201ENSMUST00000183523 62 ntBASIC4.81□□□□□ -1.64
Ccdc60Q8C4J0 Gm27189-201ENSMUST00000184119 190 ntBASIC4.81□□□□□ -1.64
Ccdc60Q8C4J0 1700016P04Rik-201ENSMUST00000186770 429 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Ccdc60Q8C4J0 Gm17777-201ENSMUST00000189740 1276 ntBASIC4.81□□□□□ -1.64
Ccdc60Q8C4J0 Gm31831-202ENSMUST00000198581 278 ntTSL 5 BASIC4.81□□□□□ -1.64
Ccdc60Q8C4J0 Gm42990-201ENSMUST00000199231 312 ntBASIC4.81□□□□□ -1.64
Ccdc60Q8C4J0 Gm43155-201ENSMUST00000202661 494 ntBASIC4.81□□□□□ -1.64
Ccdc60Q8C4J0 Gm6929-201ENSMUST00000210930 468 ntBASIC4.81□□□□□ -1.64
Ccdc60Q8C4J0 Gm35552-201ENSMUST00000214355 396 ntTSL 5 BASIC4.81□□□□□ -1.64
Ccdc60Q8C4J0 Olfr1449-204ENSMUST00000215325 1149 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Ccdc60Q8C4J0 AC100590.2-201ENSMUST00000219028 215 ntBASIC4.81□□□□□ -1.64
Ccdc60Q8C4J0 CT030194.1-201ENSMUST00000225507 532 ntBASIC4.81□□□□□ -1.64
Ccdc60Q8C4J0 AC154838.2-201ENSMUST00000226602 747 ntBASIC4.81□□□□□ -1.64
Ccdc60Q8C4J0 Mir27a-201ENSMUST00000083510 87 ntBASIC4.81□□□□□ -1.64
Ccdc60Q8C4J0 Tmem71-201ENSMUST00000048372 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Ccdc60Q8C4J0 Olfr769-203ENSMUST00000216906 4325 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Ccdc60Q8C4J0 Svet1-201ENSMUST00000209370 3940 ntBASIC4.81□□□□□ -1.64
Ccdc60Q8C4J0 Zfp433-201ENSMUST00000085664 1800 ntTSL 5 BASIC4.81□□□□□ -1.64
Ccdc60Q8C4J0 Olfr1186-203ENSMUST00000216978 1745 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Ccdc60Q8C4J0 Abi3bp-204ENSMUST00000171000 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ccdc60Q8C4J0 Vmn2r91-201ENSMUST00000172359 2571 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Ccdc60Q8C4J0 Gm42768-201ENSMUST00000197734 2897 ntBASIC4.8□□□□□ -1.64
Ccdc60Q8C4J0 Ankar-201ENSMUST00000053499 4571 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ccdc60Q8C4J0 Gm25169-201ENSMUST00000104190 129 ntBASIC4.8□□□□□ -1.64
Ccdc60Q8C4J0 Cldn34d-201ENSMUST00000114054 1003 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ccdc60Q8C4J0 Gm6760-201ENSMUST00000114682 604 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ccdc60Q8C4J0 Gm10241-201ENSMUST00000117664 286 ntBASIC4.8□□□□□ -1.64
Ccdc60Q8C4J0 Eif3s6-ps1-201ENSMUST00000117907 470 ntBASIC4.8□□□□□ -1.64
Ccdc60Q8C4J0 Gm13773-201ENSMUST00000156693 583 ntTSL 3 BASIC4.8□□□□□ -1.64
Ccdc60Q8C4J0 Gm22277-201ENSMUST00000157204 277 ntBASIC4.8□□□□□ -1.64
Ccdc60Q8C4J0 Gm23231-201ENSMUST00000157299 104 ntBASIC4.8□□□□□ -1.64
Ccdc60Q8C4J0 Gm10357-201ENSMUST00000159886 264 ntBASIC4.8□□□□□ -1.64
Ccdc60Q8C4J0 Gm17546-201ENSMUST00000168960 733 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Ccdc60Q8C4J0 Gm38393-201ENSMUST00000179360 1199 ntAPPRIS P5 TSL 5 BASIC4.8□□□□□ -1.64
Ccdc60Q8C4J0 Gm19086-201ENSMUST00000190772 665 ntBASIC4.8□□□□□ -1.64
Ccdc60Q8C4J0 Gm44134-201ENSMUST00000203064 661 ntTSL 2 BASIC4.8□□□□□ -1.64
Ccdc60Q8C4J0 Gm30717-201ENSMUST00000206549 494 ntTSL 5 BASIC4.8□□□□□ -1.64
Ccdc60Q8C4J0 AC123835.1-201ENSMUST00000214362 670 ntBASIC4.8□□□□□ -1.64
Ccdc60Q8C4J0 AC100733.1-201ENSMUST00000228494 407 ntBASIC4.8□□□□□ -1.64
Ccdc60Q8C4J0 Pmis2-201ENSMUST00000051495 699 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ccdc60Q8C4J0 Olfr816-201ENSMUST00000071605 939 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Ccdc60Q8C4J0 Cd226-202ENSMUST00000097496 911 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Ccdc60Q8C4J0 AC153969.1-201ENSMUST00000214047 2605 ntBASIC4.8□□□□□ -1.64
Ccdc60Q8C4J0 Olfr1184-202ENSMUST00000216675 3164 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Ccdc60Q8C4J0 Gm14696-201ENSMUST00000144294 3976 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Ccdc60Q8C4J0 Gm13757-201ENSMUST00000126038 4460 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
Ccdc60Q8C4J0 AC154313.1-201ENSMUST00000217755 3841 ntBASIC4.8□□□□□ -1.64
Ccdc60Q8C4J0 Vmn1r174-202ENSMUST00000228331 9058 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Ccdc60Q8C4J0 Gm4788-201ENSMUST00000027612 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ccdc60Q8C4J0 Gm45792-201ENSMUST00000207795 4268 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Ccdc60Q8C4J0 Gm6902-202ENSMUST00000191169 1581 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Ccdc60Q8C4J0 Gm42447-201ENSMUST00000200102 2903 ntBASIC4.79□□□□□ -1.64
Ccdc60Q8C4J0 Gm11923-201ENSMUST00000118135 508 ntBASIC4.79□□□□□ -1.64
Ccdc60Q8C4J0 Gm12401-201ENSMUST00000118435 228 ntBASIC4.79□□□□□ -1.64
Ccdc60Q8C4J0 Gm11656-201ENSMUST00000137462 395 ntTSL 5 BASIC4.79□□□□□ -1.64
Ccdc60Q8C4J0 Gm24244-201ENSMUST00000157317 130 ntBASIC4.79□□□□□ -1.64
Ccdc60Q8C4J0 Gm20767-201ENSMUST00000179071 510 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Ccdc60Q8C4J0 Gm20812-201ENSMUST00000179220 684 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Ccdc60Q8C4J0 Il6st-204ENSMUST00000183829 612 ntTSL 5 BASIC4.79□□□□□ -1.64
Ccdc60Q8C4J0 Gm28967-201ENSMUST00000187351 281 ntBASIC4.79□□□□□ -1.64
Ccdc60Q8C4J0 Faiml-202ENSMUST00000188555 560 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Ccdc60Q8C4J0 Gm38088-201ENSMUST00000195829 241 ntBASIC4.79□□□□□ -1.64
Ccdc60Q8C4J0 Gm44003-201ENSMUST00000203024 490 ntBASIC4.79□□□□□ -1.64
Ccdc60Q8C4J0 Olfr1295-202ENSMUST00000207786 1043 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Ccdc60Q8C4J0 Gm45272-202ENSMUST00000209875 502 ntTSL 3 BASIC4.79□□□□□ -1.64
Ccdc60Q8C4J0 Gm45539-201ENSMUST00000210313 428 ntBASIC4.79□□□□□ -1.64
Ccdc60Q8C4J0 Gm29674-201ENSMUST00000218791 1139 ntTSL 5 BASIC4.79□□□□□ -1.64
Ccdc60Q8C4J0 Csn1s2b-201ENSMUST00000072539 810 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
Ccdc60Q8C4J0 Olfr154-201ENSMUST00000099918 1079 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Ccdc60Q8C4J0 Olfr816-202ENSMUST00000213438 3306 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Ccdc60Q8C4J0 Erbin-207ENSMUST00000191275 5552 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
Ccdc60Q8C4J0 Gnpnat1-206ENSMUST00000227468 1490 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Ccdc60Q8C4J0 Olfr1308-202ENSMUST00000207560 2093 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
Ccdc60Q8C4J0 Zfp72-201ENSMUST00000091481 1629 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Ccdc60Q8C4J0 Srek1-204ENSMUST00000210489 6330 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Ccdc60Q8C4J0 Zfp759-201ENSMUST00000052716 3482 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Ccdc60Q8C4J0 Olfr1484-204ENSMUST00000216014 3842 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
Ccdc60Q8C4J0 Vmn1r184-202ENSMUST00000227230 7999 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Ccdc60Q8C4J0 Gm15613-201ENSMUST00000118396 326 ntBASIC4.78□□□□□ -1.64
Ccdc60Q8C4J0 Gm5473-201ENSMUST00000179326 642 ntBASIC4.78□□□□□ -1.64
Ccdc60Q8C4J0 Gm29065-201ENSMUST00000188786 487 ntTSL 3 BASIC4.78□□□□□ -1.64
Ccdc60Q8C4J0 Gm28822-201ENSMUST00000191140 778 ntTSL 5 BASIC4.78□□□□□ -1.64
Ccdc60Q8C4J0 Rhoay-ps1-201ENSMUST00000191243 581 ntBASIC4.78□□□□□ -1.64
Ccdc60Q8C4J0 Obox4-ps7-201ENSMUST00000196144 505 ntBASIC4.78□□□□□ -1.64
Ccdc60Q8C4J0 Gm44583-201ENSMUST00000207478 281 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 125.7 ms