Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Zfp322a-201ENSMUST00000050101 4844 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Usp47Q8BY87 Vmn1r209-202ENSMUST00000227038 6461 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Usp47Q8BY87 AC163296.2-201ENSMUST00000220177 1315 ntBASIC5.28□□□□□ -1.56
Usp47Q8BY87 Gm10287-202ENSMUST00000180599 4059 ntBASIC5.28□□□□□ -1.56
Usp47Q8BY87 Gm43588-201ENSMUST00000201862 2298 ntBASIC5.28□□□□□ -1.56
Usp47Q8BY87 Gm20342-201ENSMUST00000185480 9720 ntBASIC5.28□□□□□ -1.56
Usp47Q8BY87 Igkv3-7-201ENSMUST00000103399 299 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Usp47Q8BY87 Gm15021-201ENSMUST00000117832 742 ntBASIC5.28□□□□□ -1.56
Usp47Q8BY87 Gm13118-201ENSMUST00000120402 549 ntBASIC5.28□□□□□ -1.56
Usp47Q8BY87 Gm25105-201ENSMUST00000122477 130 ntBASIC5.28□□□□□ -1.56
Usp47Q8BY87 Gm15860-202ENSMUST00000137257 506 ntTSL 3 BASIC5.28□□□□□ -1.56
Usp47Q8BY87 Gm22320-201ENSMUST00000157149 312 ntBASIC5.28□□□□□ -1.56
Usp47Q8BY87 Gm24059-201ENSMUST00000157493 312 ntBASIC5.28□□□□□ -1.56
Usp47Q8BY87 Gm20389-201ENSMUST00000174217 1006 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Usp47Q8BY87 D830030K20Rik-202ENSMUST00000178670 441 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Usp47Q8BY87 Gm28314-201ENSMUST00000191276 345 ntBASIC5.28□□□□□ -1.56
Usp47Q8BY87 Gm37104-201ENSMUST00000193278 196 ntBASIC5.28□□□□□ -1.56
Usp47Q8BY87 Gm7041-201ENSMUST00000201227 524 ntBASIC5.28□□□□□ -1.56
Usp47Q8BY87 Gm45029-201ENSMUST00000208702 391 ntTSL 5 BASIC5.28□□□□□ -1.56
Usp47Q8BY87 Gm45659-201ENSMUST00000209295 564 ntTSL 2 BASIC5.28□□□□□ -1.56
Usp47Q8BY87 Gm8748-201ENSMUST00000211125 587 ntBASIC5.28□□□□□ -1.56
Usp47Q8BY87 Gm35857-201ENSMUST00000212739 178 ntBASIC5.28□□□□□ -1.56
Usp47Q8BY87 AC152062.1-201ENSMUST00000218129 386 ntBASIC5.28□□□□□ -1.56
Usp47Q8BY87 AC153979.1-201ENSMUST00000219684 242 ntTSL 5 BASIC5.28□□□□□ -1.56
Usp47Q8BY87 CT010506.3-201ENSMUST00000223699 410 ntBASIC5.28□□□□□ -1.56
Usp47Q8BY87 Vmn2r-ps57-201ENSMUST00000173861 2598 ntBASIC5.28□□□□□ -1.56
Usp47Q8BY87 Scel-201ENSMUST00000095576 2424 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Usp47Q8BY87 Ecm2-201ENSMUST00000051504 3596 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Usp47Q8BY87 4930431P03Rik-202ENSMUST00000166127 4237 ntTSL 2 BASIC5.27□□□□□ -1.57
Usp47Q8BY87 Vmn1r45-205ENSMUST00000227571 2757 ntBASIC5.27□□□□□ -1.57
Usp47Q8BY87 Gm13762-201ENSMUST00000144908 2612 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
Usp47Q8BY87 Ccr2-201ENSMUST00000055918 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Usp47Q8BY87 Vmn1r80-204ENSMUST00000227471 6368 ntBASIC5.27□□□□□ -1.57
Usp47Q8BY87 Trav7n-4-201ENSMUST00000103609 341 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Usp47Q8BY87 Gm17106-201ENSMUST00000105610 459 ntTSL 5 BASIC5.27□□□□□ -1.57
Usp47Q8BY87 Gm13438-201ENSMUST00000120100 573 ntBASIC5.27□□□□□ -1.57
Usp47Q8BY87 Gm23231-201ENSMUST00000157299 104 ntBASIC5.27□□□□□ -1.57
Usp47Q8BY87 Gm19637-201ENSMUST00000185933 579 ntBASIC5.27□□□□□ -1.57
Usp47Q8BY87 2210017I01Rik-201ENSMUST00000195278 822 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Usp47Q8BY87 Gm29704-201ENSMUST00000196011 253 ntBASIC5.27□□□□□ -1.57
Usp47Q8BY87 4930404I20Rik-201ENSMUST00000203246 498 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Usp47Q8BY87 Gnrh1-202ENSMUST00000223929 428 ntBASIC5.27□□□□□ -1.57
Usp47Q8BY87 AC126253.2-201ENSMUST00000226518 205 ntBASIC5.27□□□□□ -1.57
Usp47Q8BY87 Olfr357-201ENSMUST00000069578 1092 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Usp47Q8BY87 Gm23736-201ENSMUST00000082553 75 ntBASIC5.27□□□□□ -1.57
Usp47Q8BY87 Hfm1-202ENSMUST00000117588 4870 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Usp47Q8BY87 Olfr1033-202ENSMUST00000213865 3664 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Usp47Q8BY87 Frmpd3-201ENSMUST00000044702 3141 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Usp47Q8BY87 Gm4064-201ENSMUST00000187482 1561 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Usp47Q8BY87 Gm4788-201ENSMUST00000027612 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
Usp47Q8BY87 Olfr235-205ENSMUST00000214638 3459 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Usp47Q8BY87 Syne2-201ENSMUST00000044217 21690 ntAPPRIS P2 TSL 5 BASIC5.26□□□□□ -1.57
Usp47Q8BY87 4930519E07Rik-201ENSMUST00000200907 1665 ntBASIC5.26□□□□□ -1.57
Usp47Q8BY87 Pak3-204ENSMUST00000112865 8484 ntAPPRIS P3 TSL 5 BASIC5.26□□□□□ -1.57
Usp47Q8BY87 Igkv1-110-201ENSMUST00000103321 401 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Usp47Q8BY87 Cbx3-ps3-201ENSMUST00000118595 550 ntBASIC5.26□□□□□ -1.57
Usp47Q8BY87 Gm12873-201ENSMUST00000119988 422 ntBASIC5.26□□□□□ -1.57
Usp47Q8BY87 Rps15a-ps3-201ENSMUST00000121072 395 ntBASIC5.26□□□□□ -1.57
Usp47Q8BY87 Gm13180-201ENSMUST00000141222 440 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Usp47Q8BY87 Gm23391-201ENSMUST00000157579 104 ntBASIC5.26□□□□□ -1.57
Usp47Q8BY87 Gm23591-201ENSMUST00000157663 286 ntBASIC5.26□□□□□ -1.57
Usp47Q8BY87 Gm8247-202ENSMUST00000178759 375 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
Usp47Q8BY87 Gm20822-202ENSMUST00000188422 1229 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Usp47Q8BY87 Gm20828-202ENSMUST00000190516 1229 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Usp47Q8BY87 Gm6680-201ENSMUST00000192789 950 ntBASIC5.26□□□□□ -1.57
Usp47Q8BY87 Gm44611-201ENSMUST00000207507 355 ntBASIC5.26□□□□□ -1.57
Usp47Q8BY87 Gm19196-201ENSMUST00000209258 357 ntBASIC5.26□□□□□ -1.57
Usp47Q8BY87 AC118733.1-201ENSMUST00000217387 1217 ntBASIC5.26□□□□□ -1.57
Usp47Q8BY87 RMST_1.1-212ENSMUST00000220192 413 ntTSL 3 BASIC5.26□□□□□ -1.57
Usp47Q8BY87 AC091783.5-201ENSMUST00000224928 671 ntBASIC5.26□□□□□ -1.57
Usp47Q8BY87 AC155167.1-201ENSMUST00000228931 614 ntBASIC5.26□□□□□ -1.57
Usp47Q8BY87 Gm23925-201ENSMUST00000082471 132 ntBASIC5.26□□□□□ -1.57
Usp47Q8BY87 Snord15a-201ENSMUST00000083888 148 ntBASIC5.26□□□□□ -1.57
Usp47Q8BY87 Adam5-201ENSMUST00000050300 2560 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
Usp47Q8BY87 Olfr194-202ENSMUST00000213228 3668 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Usp47Q8BY87 Hfm1-201ENSMUST00000112690 5018 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Usp47Q8BY87 Gm44527-202ENSMUST00000204519 1314 ntBASIC5.26□□□□□ -1.57
Usp47Q8BY87 Gm38032-201ENSMUST00000195052 1589 ntBASIC5.25□□□□□ -1.57
Usp47Q8BY87 Olfr1043-204ENSMUST00000216028 1824 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Usp47Q8BY87 Olfr1270-205ENSMUST00000216354 4836 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Usp47Q8BY87 Nap1l1-202ENSMUST00000171797 3926 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Usp47Q8BY87 Nap1l1-204ENSMUST00000218828 3934 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Usp47Q8BY87 Zfp945-205ENSMUST00000160457 6497 ntAPPRIS P4 TSL 1 (best) BASIC5.25□□□□□ -1.57
Usp47Q8BY87 AC154677.1-201ENSMUST00000227636 2805 ntBASIC5.25□□□□□ -1.57
Usp47Q8BY87 Olfr642-202ENSMUST00000214299 4715 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Usp47Q8BY87 Dnah7b-201ENSMUST00000069293 12314 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Usp47Q8BY87 Ndst4-204ENSMUST00000173932 7417 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Usp47Q8BY87 Nlrp4c-201ENSMUST00000037728 3615 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Usp47Q8BY87 Olfr1438-ps1-201ENSMUST00000208398 4761 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Usp47Q8BY87 Gm43883-201ENSMUST00000204002 3750 ntBASIC5.25□□□□□ -1.57
Usp47Q8BY87 Gm22497-201ENSMUST00000104499 131 ntBASIC5.25□□□□□ -1.57
Usp47Q8BY87 Gm4177-201ENSMUST00000105196 918 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Usp47Q8BY87 Gm15387-201ENSMUST00000120421 648 ntBASIC5.25□□□□□ -1.57
Usp47Q8BY87 Gm16005-201ENSMUST00000120515 269 ntBASIC5.25□□□□□ -1.57
Usp47Q8BY87 2610001J05Rik-202ENSMUST00000155856 1077 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Usp47Q8BY87 Gm4216-201ENSMUST00000168926 918 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Usp47Q8BY87 Vmn1r139-201ENSMUST00000169730 894 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Usp47Q8BY87 Hmgb1-ps7-201ENSMUST00000173370 648 ntBASIC5.25□□□□□ -1.57
Usp47Q8BY87 Vmn1r112-201ENSMUST00000174538 894 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Usp47Q8BY87 Vmn1r157-201ENSMUST00000178215 894 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 79 ms