Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm12789-202ENSMUST00000106915 495 ntAPPRIS P1 TSL 3 BASIC4.48□□□□□ -1.69
Ccdc40Q8BI79 Prl-202ENSMUST00000110369 895 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
Ccdc40Q8BI79 Gm15752-201ENSMUST00000117427 394 ntBASIC4.48□□□□□ -1.69
Ccdc40Q8BI79 Gm11878-201ENSMUST00000117908 400 ntBASIC4.48□□□□□ -1.69
Ccdc40Q8BI79 Gm12734-201ENSMUST00000120228 948 ntBASIC4.48□□□□□ -1.69
Ccdc40Q8BI79 1700092C17Rik-201ENSMUST00000135792 424 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Ccdc40Q8BI79 9130015L21Rik-201ENSMUST00000140319 606 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Ccdc40Q8BI79 4930503B20Rik-203ENSMUST00000149825 970 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
Ccdc40Q8BI79 Gm12278-201ENSMUST00000153718 407 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Ccdc40Q8BI79 Gm16303-201ENSMUST00000161498 390 ntBASIC4.48□□□□□ -1.69
Ccdc40Q8BI79 Clec9a-203ENSMUST00000164513 714 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
Ccdc40Q8BI79 Gm17133-201ENSMUST00000170636 289 ntTSL 3 BASIC4.48□□□□□ -1.69
Ccdc40Q8BI79 Gm26992-201ENSMUST00000182089 468 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
Ccdc40Q8BI79 Gm28730-201ENSMUST00000185939 702 ntTSL 5 BASIC4.48□□□□□ -1.69
Ccdc40Q8BI79 Gm23925-202ENSMUST00000188429 132 ntBASIC4.48□□□□□ -1.69
Ccdc40Q8BI79 Scgb2b16-ps-201ENSMUST00000188720 333 ntBASIC4.48□□□□□ -1.69
Ccdc40Q8BI79 Olfr416-ps1-201ENSMUST00000192734 804 ntBASIC4.48□□□□□ -1.69
Ccdc40Q8BI79 Gm37577-203ENSMUST00000194712 991 ntTSL 5 BASIC4.48□□□□□ -1.69
Ccdc40Q8BI79 Gm21006-201ENSMUST00000196930 667 ntBASIC4.48□□□□□ -1.69
Ccdc40Q8BI79 Mir7682-201ENSMUST00000198467 58 ntBASIC4.48□□□□□ -1.69
Ccdc40Q8BI79 Gm43345-201ENSMUST00000199484 269 ntBASIC4.48□□□□□ -1.69
Ccdc40Q8BI79 Gm34583-202ENSMUST00000202537 451 ntTSL 2 BASIC4.48□□□□□ -1.69
Ccdc40Q8BI79 Gm5876-201ENSMUST00000203735 243 ntBASIC4.48□□□□□ -1.69
Ccdc40Q8BI79 Gm44278-201ENSMUST00000204082 312 ntTSL 2 BASIC4.48□□□□□ -1.69
Ccdc40Q8BI79 Gm44002-201ENSMUST00000205134 594 ntBASIC4.48□□□□□ -1.69
Ccdc40Q8BI79 Gm38832-201ENSMUST00000205674 400 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Ccdc40Q8BI79 Gm44724-202ENSMUST00000208251 531 ntTSL 5 BASIC4.48□□□□□ -1.69
Ccdc40Q8BI79 Gm44543-201ENSMUST00000209136 396 ntBASIC4.48□□□□□ -1.69
Ccdc40Q8BI79 Gm39302-201ENSMUST00000215184 636 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Ccdc40Q8BI79 AC069561.4-201ENSMUST00000215291 572 ntAPPRIS P1 TSL 3 BASIC4.48□□□□□ -1.69
Ccdc40Q8BI79 Gm46401-202ENSMUST00000223425 803 ntTSL 5 BASIC4.48□□□□□ -1.69
Ccdc40Q8BI79 Rps24-205ENSMUST00000223999 525 ntAPPRIS ALT1 BASIC4.48□□□□□ -1.69
Ccdc40Q8BI79 AC118006.1-201ENSMUST00000224211 501 ntBASIC4.48□□□□□ -1.69
Ccdc40Q8BI79 AC140210.1-201ENSMUST00000224961 534 ntBASIC4.48□□□□□ -1.69
Ccdc40Q8BI79 AC117656.3-202ENSMUST00000225842 1055 ntBASIC4.48□□□□□ -1.69
Ccdc40Q8BI79 AC155237.2-201ENSMUST00000228487 478 ntBASIC4.48□□□□□ -1.69
Ccdc40Q8BI79 4933400A11Rik-201ENSMUST00000068874 1230 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Ccdc40Q8BI79 Spink7-201ENSMUST00000076194 258 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Ccdc40Q8BI79 Olfr833-ps1-201ENSMUST00000086493 913 ntBASIC4.48□□□□□ -1.69
Ccdc40Q8BI79 Gm22444-201ENSMUST00000093693 108 ntBASIC4.48□□□□□ -1.69
Ccdc40Q8BI79 Gm23058-201ENSMUST00000093703 107 ntBASIC4.48□□□□□ -1.69
Ccdc40Q8BI79 Olfr1270-206ENSMUST00000217139 4803 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Ccdc40Q8BI79 Gm3616-201ENSMUST00000174430 2514 ntBASIC4.48□□□□□ -1.69
Ccdc40Q8BI79 Gm3683-201ENSMUST00000175701 2513 ntBASIC4.48□□□□□ -1.69
Ccdc40Q8BI79 Zfp131-201ENSMUST00000177916 3067 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
Ccdc40Q8BI79 Vmn1r52-207ENSMUST00000228394 3069 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Ccdc40Q8BI79 Gm43844-201ENSMUST00000202926 5605 ntBASIC4.48□□□□□ -1.69
Ccdc40Q8BI79 Vmn2r35-201ENSMUST00000169683 2586 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Ccdc40Q8BI79 4931408C20Rik-201ENSMUST00000097801 4318 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Ccdc40Q8BI79 Eda2r-201ENSMUST00000037353 4752 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Ccdc40Q8BI79 Zfp955a-201ENSMUST00000008830 1638 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Ccdc40Q8BI79 Olfr1205-202ENSMUST00000215929 6149 ntAPPRIS P1 TSL 3 BASIC4.47□□□□□ -1.69
Ccdc40Q8BI79 Igkv1-35-201ENSMUST00000103374 359 ntAPPRIS ALT2 BASIC4.47□□□□□ -1.69
Ccdc40Q8BI79 Gm14605-201ENSMUST00000120599 268 ntBASIC4.47□□□□□ -1.69
Ccdc40Q8BI79 Cldn34-ps-201ENSMUST00000145498 600 ntBASIC4.47□□□□□ -1.69
Ccdc40Q8BI79 Gm24898-201ENSMUST00000158133 106 ntBASIC4.47□□□□□ -1.69
Ccdc40Q8BI79 Atp2b4-208ENSMUST00000167348 243 ntBASIC4.47□□□□□ -1.69
Ccdc40Q8BI79 Gm9613-201ENSMUST00000171662 196 ntBASIC4.47□□□□□ -1.69
Ccdc40Q8BI79 Vmn1r-ps40-201ENSMUST00000172862 343 ntBASIC4.47□□□□□ -1.69
Ccdc40Q8BI79 Vmn1r-ps32-201ENSMUST00000174389 956 ntBASIC4.47□□□□□ -1.69
Ccdc40Q8BI79 Vmn2r-ps74-201ENSMUST00000174705 917 ntBASIC4.47□□□□□ -1.69
Ccdc40Q8BI79 Gm23638-201ENSMUST00000175073 126 ntBASIC4.47□□□□□ -1.69
Ccdc40Q8BI79 Gm23158-201ENSMUST00000175076 126 ntBASIC4.47□□□□□ -1.69
Ccdc40Q8BI79 Gm22907-201ENSMUST00000175198 126 ntBASIC4.47□□□□□ -1.69
Ccdc40Q8BI79 Gm22625-201ENSMUST00000175382 126 ntBASIC4.47□□□□□ -1.69
Ccdc40Q8BI79 Gm22875-201ENSMUST00000175449 126 ntBASIC4.47□□□□□ -1.69
Ccdc40Q8BI79 Gm25197-201ENSMUST00000175516 126 ntBASIC4.47□□□□□ -1.69
Ccdc40Q8BI79 Gm27857-201ENSMUST00000176930 126 ntBASIC4.47□□□□□ -1.69
Ccdc40Q8BI79 Vmn1r-ps52-201ENSMUST00000177426 862 ntBASIC4.47□□□□□ -1.69
Ccdc40Q8BI79 Gm26268-201ENSMUST00000177685 126 ntBASIC4.47□□□□□ -1.69
Ccdc40Q8BI79 Gm21756-201ENSMUST00000178380 930 ntBASIC4.47□□□□□ -1.69
Ccdc40Q8BI79 Gm23681-201ENSMUST00000178821 126 ntBASIC4.47□□□□□ -1.69
Ccdc40Q8BI79 Gm21405-201ENSMUST00000179024 930 ntBASIC4.47□□□□□ -1.69
Ccdc40Q8BI79 S100a11-ps-201ENSMUST00000181735 306 ntBASIC4.47□□□□□ -1.69
Ccdc40Q8BI79 Gm27387-201ENSMUST00000184583 116 ntBASIC4.47□□□□□ -1.69
Ccdc40Q8BI79 Gm29031-201ENSMUST00000185316 614 ntBASIC4.47□□□□□ -1.69
Ccdc40Q8BI79 Gm29000-201ENSMUST00000185444 614 ntBASIC4.47□□□□□ -1.69
Ccdc40Q8BI79 Gm28204-201ENSMUST00000185934 614 ntBASIC4.47□□□□□ -1.69
Ccdc40Q8BI79 1700067G17Rik-201ENSMUST00000186180 603 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Ccdc40Q8BI79 Gm21191-201ENSMUST00000186484 930 ntBASIC4.47□□□□□ -1.69
Ccdc40Q8BI79 Gm28290-201ENSMUST00000186505 614 ntBASIC4.47□□□□□ -1.69
Ccdc40Q8BI79 Gm28161-201ENSMUST00000186669 614 ntBASIC4.47□□□□□ -1.69
Ccdc40Q8BI79 Gm28749-209ENSMUST00000189599 614 ntBASIC4.47□□□□□ -1.69
Ccdc40Q8BI79 Gm28490-202ENSMUST00000190946 930 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Ccdc40Q8BI79 Gm29503-201ENSMUST00000191044 930 ntBASIC4.47□□□□□ -1.69
Ccdc40Q8BI79 Gm7967-203ENSMUST00000191409 1049 ntTSL 5 BASIC4.47□□□□□ -1.69
Ccdc40Q8BI79 Gm38046-201ENSMUST00000192733 550 ntBASIC4.47□□□□□ -1.69
Ccdc40Q8BI79 Gm33163-201ENSMUST00000194504 614 ntBASIC4.47□□□□□ -1.69
Ccdc40Q8BI79 Gm43236-201ENSMUST00000197414 313 ntTSL 5 BASIC4.47□□□□□ -1.69
Ccdc40Q8BI79 Gm42502-201ENSMUST00000198550 1089 ntBASIC4.47□□□□□ -1.69
Ccdc40Q8BI79 Gm42850-201ENSMUST00000202094 201 ntBASIC4.47□□□□□ -1.69
Ccdc40Q8BI79 Gm40293-201ENSMUST00000202596 485 ntTSL 3 BASIC4.47□□□□□ -1.69
Ccdc40Q8BI79 Pip-202ENSMUST00000203244 736 ntTSL 3 BASIC4.47□□□□□ -1.69
Ccdc40Q8BI79 Gm34224-201ENSMUST00000204606 364 ntBASIC4.47□□□□□ -1.69
Ccdc40Q8BI79 Olfr892-ps1-201ENSMUST00000211998 932 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Ccdc40Q8BI79 AC159472.1-201ENSMUST00000218178 463 ntBASIC4.47□□□□□ -1.69
Ccdc40Q8BI79 Vmn1r236-201ENSMUST00000066998 1121 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Ccdc40Q8BI79 Gm23510-201ENSMUST00000083083 163 ntBASIC4.47□□□□□ -1.69
Ccdc40Q8BI79 Olfr262-201ENSMUST00000087818 939 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Ccdc40Q8BI79 Cdh7-209ENSMUST00000172005 3353 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms