Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Gm14529-201ENSMUST00000117894 406 ntBASIC4.95□□□□□ -1.62
Rnf220Q6PDX6 Gm11774-201ENSMUST00000118601 293 ntBASIC4.95□□□□□ -1.62
Rnf220Q6PDX6 Gm14580-201ENSMUST00000119122 718 ntBASIC4.95□□□□□ -1.62
Rnf220Q6PDX6 Zbtb8os-202ENSMUST00000119480 527 ntTSL 5 BASIC4.95□□□□□ -1.62
Rnf220Q6PDX6 Gm14516-201ENSMUST00000120012 252 ntBASIC4.95□□□□□ -1.62
Rnf220Q6PDX6 Mup-ps18-201ENSMUST00000120145 531 ntBASIC4.95□□□□□ -1.62
Rnf220Q6PDX6 Gm13574-201ENSMUST00000120482 394 ntBASIC4.95□□□□□ -1.62
Rnf220Q6PDX6 Gm14411-201ENSMUST00000121798 914 ntBASIC4.95□□□□□ -1.62
Rnf220Q6PDX6 Gm23981-201ENSMUST00000157136 106 ntBASIC4.95□□□□□ -1.62
Rnf220Q6PDX6 Gm26410-201ENSMUST00000157670 261 ntBASIC4.95□□□□□ -1.62
Rnf220Q6PDX6 Gm17206-201ENSMUST00000168123 577 ntTSL 5 BASIC4.95□□□□□ -1.62
Rnf220Q6PDX6 Gm8267-202ENSMUST00000169062 1240 ntAPPRIS P2 TSL 5 BASIC4.95□□□□□ -1.62
Rnf220Q6PDX6 Cldn34c1-206ENSMUST00000169445 705 ntAPPRIS P3 TSL 5 BASIC4.95□□□□□ -1.62
Rnf220Q6PDX6 Vmn1r-ps23-201ENSMUST00000175708 295 ntBASIC4.95□□□□□ -1.62
Rnf220Q6PDX6 9330182O14Rik-201ENSMUST00000179120 423 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Rnf220Q6PDX6 Gm26950-201ENSMUST00000182734 498 ntBASIC4.95□□□□□ -1.62
Rnf220Q6PDX6 Gm27317-201ENSMUST00000183533 95 ntBASIC4.95□□□□□ -1.62
Rnf220Q6PDX6 Mir496b-201ENSMUST00000184935 113 ntBASIC4.95□□□□□ -1.62
Rnf220Q6PDX6 Gm28118-201ENSMUST00000185957 294 ntBASIC4.95□□□□□ -1.62
Rnf220Q6PDX6 Gm28666-201ENSMUST00000186649 274 ntBASIC4.95□□□□□ -1.62
Rnf220Q6PDX6 Gm20811-201ENSMUST00000190500 553 ntBASIC4.95□□□□□ -1.62
Rnf220Q6PDX6 1810012K16Rik-201ENSMUST00000190830 547 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Rnf220Q6PDX6 Gm28086-201ENSMUST00000191586 317 ntTSL 5 BASIC4.95□□□□□ -1.62
Rnf220Q6PDX6 Trbv12-3-201ENSMUST00000192675 372 ntBASIC4.95□□□□□ -1.62
Rnf220Q6PDX6 Igkv2-107-201ENSMUST00000196000 313 ntBASIC4.95□□□□□ -1.62
Rnf220Q6PDX6 Gm43392-201ENSMUST00000196560 434 ntBASIC4.95□□□□□ -1.62
Rnf220Q6PDX6 Rpl7-ps7-201ENSMUST00000200912 799 ntBASIC4.95□□□□□ -1.62
Rnf220Q6PDX6 Gm6719-201ENSMUST00000202067 335 ntBASIC4.95□□□□□ -1.62
Rnf220Q6PDX6 Gm43884-201ENSMUST00000204251 559 ntBASIC4.95□□□□□ -1.62
Rnf220Q6PDX6 Gm9560-201ENSMUST00000205012 1201 ntBASIC4.95□□□□□ -1.62
Rnf220Q6PDX6 Gm44768-201ENSMUST00000205719 393 ntBASIC4.95□□□□□ -1.62
Rnf220Q6PDX6 Gm45646-201ENSMUST00000210983 441 ntTSL 5 BASIC4.95□□□□□ -1.62
Rnf220Q6PDX6 Gm17999-201ENSMUST00000211568 542 ntBASIC4.95□□□□□ -1.62
Rnf220Q6PDX6 AC162931.1-201ENSMUST00000214184 267 ntBASIC4.95□□□□□ -1.62
Rnf220Q6PDX6 Gm8125-201ENSMUST00000216602 738 ntBASIC4.95□□□□□ -1.62
Rnf220Q6PDX6 AC118733.1-201ENSMUST00000217387 1217 ntBASIC4.95□□□□□ -1.62
Rnf220Q6PDX6 AC153852.1-201ENSMUST00000217881 567 ntBASIC4.95□□□□□ -1.62
Rnf220Q6PDX6 AC153382.1-201ENSMUST00000217953 1007 ntTSL 5 BASIC4.95□□□□□ -1.62
Rnf220Q6PDX6 Gm2628-201ENSMUST00000218019 426 ntBASIC4.95□□□□□ -1.62
Rnf220Q6PDX6 AC116589.1-201ENSMUST00000220634 327 ntBASIC4.95□□□□□ -1.62
Rnf220Q6PDX6 AC126673.3-201ENSMUST00000223414 3829 ntBASIC4.95□□□□□ -1.62
Rnf220Q6PDX6 CT025598.1-201ENSMUST00000225140 427 ntBASIC4.95□□□□□ -1.62
Rnf220Q6PDX6 AC164315.1-201ENSMUST00000226452 708 ntBASIC4.95□□□□□ -1.62
Rnf220Q6PDX6 AC158142.1-201ENSMUST00000226721 416 ntBASIC4.95□□□□□ -1.62
Rnf220Q6PDX6 Olfr385-201ENSMUST00000071553 939 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Rnf220Q6PDX6 Olfr741-201ENSMUST00000071932 936 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Rnf220Q6PDX6 Olfr972-201ENSMUST00000079767 945 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Rnf220Q6PDX6 Olfr1193-201ENSMUST00000081697 957 ntBASIC4.95□□□□□ -1.62
Rnf220Q6PDX6 Gm3512-201ENSMUST00000090663 441 ntTSL 5 BASIC4.95□□□□□ -1.62
Rnf220Q6PDX6 Olfr994-201ENSMUST00000099925 945 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Rnf220Q6PDX6 Gm45854-201ENSMUST00000211857 3488 ntBASIC4.95□□□□□ -1.62
Rnf220Q6PDX6 Atp8b5-202ENSMUST00000102953 2609 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Rnf220Q6PDX6 Gm5447-201ENSMUST00000070258 1773 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Rnf220Q6PDX6 Olfr1143-202ENSMUST00000099852 2028 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Rnf220Q6PDX6 Gm14033-201ENSMUST00000128307 2265 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Rnf220Q6PDX6 Olfr129-202ENSMUST00000216476 5275 ntAPPRIS P1 TSL 3 BASIC4.95□□□□□ -1.62
Rnf220Q6PDX6 Rmi1-204ENSMUST00000225815 2447 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Rnf220Q6PDX6 Pon3-201ENSMUST00000031773 1837 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Rnf220Q6PDX6 Olfr1271-202ENSMUST00000216383 6613 ntAPPRIS P1 TSL 3 BASIC4.95□□□□□ -1.62
Rnf220Q6PDX6 Rbm41-204ENSMUST00000113011 3728 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Rnf220Q6PDX6 AC131329.1-201ENSMUST00000221204 3487 ntBASIC4.95□□□□□ -1.62
Rnf220Q6PDX6 Vmn2r3-202ENSMUST00000176328 2748 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
Rnf220Q6PDX6 Olfr612-203ENSMUST00000215663 2473 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Rnf220Q6PDX6 Spink5-201ENSMUST00000069245 4785 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Rnf220Q6PDX6 Gm44109-201ENSMUST00000204514 1954 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Rnf220Q6PDX6 Gm37628-201ENSMUST00000194644 5440 ntBASIC4.94□□□□□ -1.62
Rnf220Q6PDX6 Gm28672-201ENSMUST00000188727 1490 ntTSL 5 BASIC4.94□□□□□ -1.62
Rnf220Q6PDX6 Fbxw16-201ENSMUST00000084984 1497 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Rnf220Q6PDX6 Gm7903-201ENSMUST00000113172 3677 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
Rnf220Q6PDX6 Gm5128-201ENSMUST00000113173 3677 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Rnf220Q6PDX6 Ing3-201ENSMUST00000031680 3800 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Rnf220Q6PDX6 Olfr726-206ENSMUST00000217025 1363 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Rnf220Q6PDX6 Olfr1305-203ENSMUST00000213737 1775 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Rnf220Q6PDX6 Vmn1r171-206ENSMUST00000227386 2570 ntAPPRIS ALT2 BASIC4.94□□□□□ -1.62
Rnf220Q6PDX6 Vmn1r171-208ENSMUST00000227866 2566 ntAPPRIS ALT2 BASIC4.94□□□□□ -1.62
Rnf220Q6PDX6 9230009I02Rik-201ENSMUST00000101255 1148 ntTSL 2 BASIC4.94□□□□□ -1.62
Rnf220Q6PDX6 Txndc8-201ENSMUST00000102897 620 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Rnf220Q6PDX6 Gm25917-201ENSMUST00000104267 130 ntBASIC4.94□□□□□ -1.62
Rnf220Q6PDX6 Gm12193-201ENSMUST00000117250 379 ntBASIC4.94□□□□□ -1.62
Rnf220Q6PDX6 Gm15012-201ENSMUST00000119176 106 ntBASIC4.94□□□□□ -1.62
Rnf220Q6PDX6 Gm13482-201ENSMUST00000119842 254 ntBASIC4.94□□□□□ -1.62
Rnf220Q6PDX6 Mup-ps17-201ENSMUST00000120723 218 ntBASIC4.94□□□□□ -1.62
Rnf220Q6PDX6 Pdcl2-202ENSMUST00000122213 1049 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Rnf220Q6PDX6 Gm22199-201ENSMUST00000122660 126 ntBASIC4.94□□□□□ -1.62
Rnf220Q6PDX6 1600025M17Rik-201ENSMUST00000138262 666 ntTSL 5 BASIC4.94□□□□□ -1.62
Rnf220Q6PDX6 8030443G20Rik-201ENSMUST00000140919 903 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Rnf220Q6PDX6 Gm15485-201ENSMUST00000149095 258 ntTSL 3 BASIC4.94□□□□□ -1.62
Rnf220Q6PDX6 Gm23499-201ENSMUST00000157736 268 ntBASIC4.94□□□□□ -1.62
Rnf220Q6PDX6 Gm23806-201ENSMUST00000175157 109 ntBASIC4.94□□□□□ -1.62
Rnf220Q6PDX6 Gm21828-201ENSMUST00000178050 543 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Rnf220Q6PDX6 Gm24303-201ENSMUST00000178237 126 ntBASIC4.94□□□□□ -1.62
Rnf220Q6PDX6 Gm21866-201ENSMUST00000178428 543 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Rnf220Q6PDX6 Gm21725-201ENSMUST00000178519 543 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Rnf220Q6PDX6 Gm21800-201ENSMUST00000178559 543 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Rnf220Q6PDX6 Gm26177-201ENSMUST00000178683 107 ntBASIC4.94□□□□□ -1.62
Rnf220Q6PDX6 Gm21852-201ENSMUST00000179125 543 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Rnf220Q6PDX6 Gm21764-201ENSMUST00000179219 543 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Rnf220Q6PDX6 Gm21891-201ENSMUST00000179284 543 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Rnf220Q6PDX6 2610528A11Rik-201ENSMUST00000179488 754 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Rnf220Q6PDX6 Gm21904-201ENSMUST00000179522 543 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 83.1 ms