Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Snord14e-201ENSMUST00000082857 90 ntBASIC3.84□□□□□ -1.79
Vsx2Q61412 Bcl2a1a-201ENSMUST00000098485 819 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Vsx2Q61412 Olfr1000-201ENSMUST00000099921 945 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Vsx2Q61412 Nlrp4e-201ENSMUST00000076470 3382 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Vsx2Q61412 Gm6367-201ENSMUST00000178646 2464 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
Vsx2Q61412 5930409G06Rik-201ENSMUST00000192347 1544 ntBASIC3.84□□□□□ -1.8
Vsx2Q61412 Obscn-203ENSMUST00000052872 23006 ntTSL 5 BASIC3.84□□□□□ -1.8
Vsx2Q61412 Stk31-202ENSMUST00000163954 2988 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.8
Vsx2Q61412 Ankar-201ENSMUST00000053499 4571 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
Vsx2Q61412 Gm43594-201ENSMUST00000201153 3442 ntBASIC3.83□□□□□ -1.8
Vsx2Q61412 Olfr836-203ENSMUST00000215981 5046 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
Vsx2Q61412 Gm15926-201ENSMUST00000120492 550 ntBASIC3.83□□□□□ -1.8
Vsx2Q61412 Gm14649-201ENSMUST00000121814 324 ntBASIC3.83□□□□□ -1.8
Vsx2Q61412 Gm11281-201ENSMUST00000141391 576 ntBASIC3.83□□□□□ -1.8
Vsx2Q61412 Gm21816-201ENSMUST00000179255 360 ntBASIC3.83□□□□□ -1.8
Vsx2Q61412 Mir6345-201ENSMUST00000184286 128 ntBASIC3.83□□□□□ -1.8
Vsx2Q61412 Trdv1-202ENSMUST00000187163 334 ntAPPRIS ALT2 BASIC3.83□□□□□ -1.8
Vsx2Q61412 1700027A15Rik-203ENSMUST00000188793 423 ntTSL 3 BASIC3.83□□□□□ -1.8
Vsx2Q61412 Gm38061-201ENSMUST00000192490 365 ntBASIC3.83□□□□□ -1.8
Vsx2Q61412 Gm31942-201ENSMUST00000192534 827 ntTSL 5 BASIC3.83□□□□□ -1.8
Vsx2Q61412 Gm28724-202ENSMUST00000194218 295 ntBASIC3.83□□□□□ -1.8
Vsx2Q61412 Gm4644-201ENSMUST00000197587 400 ntBASIC3.83□□□□□ -1.8
Vsx2Q61412 Gm8774-201ENSMUST00000203621 692 ntBASIC3.83□□□□□ -1.8
Vsx2Q61412 Gm8035-201ENSMUST00000204625 687 ntBASIC3.83□□□□□ -1.8
Vsx2Q61412 Klk1b18-ps-201ENSMUST00000205780 167 ntBASIC3.83□□□□□ -1.8
Vsx2Q61412 Gm29674-201ENSMUST00000218791 1139 ntTSL 5 BASIC3.83□□□□□ -1.8
Vsx2Q61412 AC132315.1-201ENSMUST00000221771 390 ntBASIC3.83□□□□□ -1.8
Vsx2Q61412 CT030194.2-201ENSMUST00000225752 379 ntBASIC3.83□□□□□ -1.8
Vsx2Q61412 AC117949.2-201ENSMUST00000225900 584 ntBASIC3.83□□□□□ -1.8
Vsx2Q61412 Kap-201ENSMUST00000048032 707 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
Vsx2Q61412 Nat1-201ENSMUST00000026677 1347 ntAPPRIS P2 BASIC3.83□□□□□ -1.8
Vsx2Q61412 BC002059-202ENSMUST00000190415 1964 ntTSL 2 BASIC3.83□□□□□ -1.8
Vsx2Q61412 4921515E04Rik-203ENSMUST00000227364 2309 ntBASIC3.83□□□□□ -1.8
Vsx2Q61412 Ms4a2-204ENSMUST00000186978 2391 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Vsx2Q61412 Gm43260-201ENSMUST00000197378 2430 ntBASIC3.83□□□□□ -1.8
Vsx2Q61412 Olfr38-202ENSMUST00000215796 2782 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Vsx2Q61412 Olfr1277-202ENSMUST00000214760 5944 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Vsx2Q61412 Vmn1r14-205ENSMUST00000227884 7542 ntAPPRIS P2 BASIC3.83□□□□□ -1.8
Vsx2Q61412 Olfr714-203ENSMUST00000214429 4324 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Vsx2Q61412 Gm43508-201ENSMUST00000197251 3783 ntBASIC3.82□□□□□ -1.8
Vsx2Q61412 4930415L06Rik-201ENSMUST00000088146 2617 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Vsx2Q61412 Vmn2r-ps45-201ENSMUST00000174138 2435 ntBASIC3.82□□□□□ -1.8
Vsx2Q61412 Mgat4e-202ENSMUST00000172898 1735 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
Vsx2Q61412 Olfr213-202ENSMUST00000220008 4020 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Vsx2Q61412 Cbll1-204ENSMUST00000185739 3945 ntAPPRIS ALT1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Vsx2Q61412 Gm23424-201ENSMUST00000103889 110 ntBASIC3.82□□□□□ -1.8
Vsx2Q61412 Fbxo48-202ENSMUST00000109635 1098 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Vsx2Q61412 Gm13268-201ENSMUST00000117485 433 ntBASIC3.82□□□□□ -1.8
Vsx2Q61412 Gm13567-201ENSMUST00000118026 247 ntBASIC3.82□□□□□ -1.8
Vsx2Q61412 Klra11-ps-201ENSMUST00000122033 810 ntBASIC3.82□□□□□ -1.8
Vsx2Q61412 Gm15597-201ENSMUST00000145924 1050 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Vsx2Q61412 Gm23585-201ENSMUST00000157656 102 ntBASIC3.82□□□□□ -1.8
Vsx2Q61412 Gm17155-201ENSMUST00000165969 473 ntBASIC3.82□□□□□ -1.8
Vsx2Q61412 Vmn1r128-201ENSMUST00000169165 924 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Vsx2Q61412 Il1rl1-205ENSMUST00000174335 1216 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Vsx2Q61412 Mir1251-201ENSMUST00000175486 84 ntBASIC3.82□□□□□ -1.8
Vsx2Q61412 Gm18547-201ENSMUST00000192439 811 ntBASIC3.82□□□□□ -1.8
Vsx2Q61412 Gm43559-201ENSMUST00000198755 466 ntBASIC3.82□□□□□ -1.8
Vsx2Q61412 Gm17887-201ENSMUST00000200194 547 ntBASIC3.82□□□□□ -1.8
Vsx2Q61412 Gm43424-201ENSMUST00000200484 253 ntBASIC3.82□□□□□ -1.8
Vsx2Q61412 AC153912.1-201ENSMUST00000217011 724 ntAPPRIS P1 TSL 3 BASIC3.82□□□□□ -1.8
Vsx2Q61412 CT030030.1-201ENSMUST00000218809 152 ntBASIC3.82□□□□□ -1.8
Vsx2Q61412 AC147615.1-201ENSMUST00000218914 441 ntBASIC3.82□□□□□ -1.8
Vsx2Q61412 AC156790.5-201ENSMUST00000227075 231 ntBASIC3.82□□□□□ -1.8
Vsx2Q61412 Gm10491-201ENSMUST00000085330 117 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Vsx2Q61412 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
Vsx2Q61412 Atad1-201ENSMUST00000070210 2813 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Vsx2Q61412 Pak3-201ENSMUST00000033640 8348 ntAPPRIS ALT1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Vsx2Q61412 Foxp2-203ENSMUST00000115470 2692 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Vsx2Q61412 Gm43197-201ENSMUST00000201493 2583 ntBASIC3.82□□□□□ -1.8
Vsx2Q61412 Gm43009-201ENSMUST00000199979 3566 ntBASIC3.82□□□□□ -1.8
Vsx2Q61412 Vmn1r82-201ENSMUST00000072801 4784 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Vsx2Q61412 Gm4788-203ENSMUST00000111989 3187 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
Vsx2Q61412 Zfp873-201ENSMUST00000105313 1893 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Vsx2Q61412 Gm36927-201ENSMUST00000192504 1841 ntBASIC3.81□□□□□ -1.8
Vsx2Q61412 Cd53-201ENSMUST00000038845 1742 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Vsx2Q61412 1810006J02Rik-201ENSMUST00000186473 1687 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Vsx2Q61412 Nlrp4c-201ENSMUST00000037728 3615 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Vsx2Q61412 AY358078-201ENSMUST00000053821 1461 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Vsx2Q61412 Zfp708-201ENSMUST00000109742 2416 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
Vsx2Q61412 4933400A11Rik-203ENSMUST00000112102 1101 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Vsx2Q61412 Olfr1171-ps1-201ENSMUST00000118079 837 ntBASIC3.81□□□□□ -1.8
Vsx2Q61412 Gm11216-201ENSMUST00000125240 354 ntTSL 5 BASIC3.81□□□□□ -1.8
Vsx2Q61412 Gm5924-201ENSMUST00000132554 871 ntBASIC3.81□□□□□ -1.8
Vsx2Q61412 Gm14095-201ENSMUST00000134264 516 ntTSL 3 BASIC3.81□□□□□ -1.8
Vsx2Q61412 Gm11579-201ENSMUST00000145502 845 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Vsx2Q61412 Gm26320-201ENSMUST00000157742 306 ntBASIC3.81□□□□□ -1.8
Vsx2Q61412 Gm24850-201ENSMUST00000158029 119 ntBASIC3.81□□□□□ -1.8
Vsx2Q61412 Gm6245-201ENSMUST00000164699 768 ntBASIC3.81□□□□□ -1.8
Vsx2Q61412 Cox6b2-206ENSMUST00000182738 423 ntTSL 2 BASIC3.81□□□□□ -1.8
Vsx2Q61412 1700109I08Rik-201ENSMUST00000185680 396 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Vsx2Q61412 Gm28471-201ENSMUST00000185994 615 ntBASIC3.81□□□□□ -1.8
Vsx2Q61412 Gm29405-201ENSMUST00000187204 370 ntTSL 5 BASIC3.81□□□□□ -1.8
Vsx2Q61412 Gm29557-201ENSMUST00000188245 370 ntTSL 5 BASIC3.81□□□□□ -1.8
Vsx2Q61412 Gm28174-201ENSMUST00000191003 370 ntTSL 5 BASIC3.81□□□□□ -1.8
Vsx2Q61412 Gm28267-201ENSMUST00000191093 265 ntBASIC3.81□□□□□ -1.8
Vsx2Q61412 Gm29459-201ENSMUST00000191359 518 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Vsx2Q61412 Olfr1473-ps1-201ENSMUST00000207135 958 ntBASIC3.81□□□□□ -1.8
Vsx2Q61412 Bc1-ps1-201ENSMUST00000208471 318 ntBASIC3.81□□□□□ -1.8
Vsx2Q61412 Gm45317-201ENSMUST00000210385 223 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 222.7 ms