Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Gm18417-201ENSMUST00000176564 648 ntBASIC5.05□□□□□ -1.6
Ift88Q61371 Gm28703-201ENSMUST00000185312 1159 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Ift88Q61371 C530043A13Rik-201ENSMUST00000186453 550 ntTSL 3 BASIC5.05□□□□□ -1.6
Ift88Q61371 Gm29563-201ENSMUST00000187249 496 ntBASIC5.05□□□□□ -1.6
Ift88Q61371 Gm29105-201ENSMUST00000187256 450 ntBASIC5.05□□□□□ -1.6
Ift88Q61371 1700001D01Rik-201ENSMUST00000188654 565 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Ift88Q61371 1700108N06Rik-201ENSMUST00000196572 681 ntTSL 5 BASIC5.05□□□□□ -1.6
Ift88Q61371 4930437M23Rik-201ENSMUST00000197456 968 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Ift88Q61371 Gm43358-201ENSMUST00000199217 970 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Ift88Q61371 Gm43131-201ENSMUST00000200042 969 ntTSL 5 BASIC5.05□□□□□ -1.6
Ift88Q61371 Gm43810-201ENSMUST00000201018 232 ntBASIC5.05□□□□□ -1.6
Ift88Q61371 Olfr187-201ENSMUST00000206428 978 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Ift88Q61371 AC156950.1-201ENSMUST00000219604 456 ntBASIC5.05□□□□□ -1.6
Ift88Q61371 Gm18409-202ENSMUST00000220105 529 ntBASIC5.05□□□□□ -1.6
Ift88Q61371 Gm3086-202ENSMUST00000221248 310 ntBASIC5.05□□□□□ -1.6
Ift88Q61371 Gm36501-201ENSMUST00000221857 745 ntBASIC5.05□□□□□ -1.6
Ift88Q61371 AC126275.1-201ENSMUST00000224881 446 ntBASIC5.05□□□□□ -1.6
Ift88Q61371 AC154335.2-201ENSMUST00000225916 638 ntBASIC5.05□□□□□ -1.6
Ift88Q61371 Olfr447-201ENSMUST00000055763 933 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Ift88Q61371 Olfr986-201ENSMUST00000062229 1016 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Ift88Q61371 Olfr126-202ENSMUST00000213844 1958 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Ift88Q61371 Gm28488-203ENSMUST00000188792 1498 ntTSL 5 BASIC5.05□□□□□ -1.6
Ift88Q61371 Gm42616-201ENSMUST00000198989 4184 ntBASIC5.05□□□□□ -1.6
Ift88Q61371 Olfr588-ps1-201ENSMUST00000118682 4607 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Ift88Q61371 Slfn8-203ENSMUST00000108152 3083 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Ift88Q61371 Vmn2r26-201ENSMUST00000032238 2568 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Ift88Q61371 Usp15-211ENSMUST00000220377 11525 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Ift88Q61371 Gabra6-202ENSMUST00000109286 1554 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
Ift88Q61371 Cep290-206ENSMUST00000219765 7985 ntTSL 5 BASIC5.04□□□□□ -1.6
Ift88Q61371 Hmcn1-201ENSMUST00000074783 17908 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Ift88Q61371 Hm629797-201ENSMUST00000183645 2398 ntBASIC5.04□□□□□ -1.6
Ift88Q61371 Nebl-206ENSMUST00000131957 1709 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Ift88Q61371 Acsm3-203ENSMUST00000106527 2557 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Ift88Q61371 Gm42946-201ENSMUST00000196108 2570 ntBASIC5.04□□□□□ -1.6
Ift88Q61371 Cacnb4-202ENSMUST00000102760 7872 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Ift88Q61371 Gm23424-201ENSMUST00000103889 110 ntBASIC5.04□□□□□ -1.6
Ift88Q61371 Mup6-203ENSMUST00000107521 642 ntTSL 3 BASIC5.04□□□□□ -1.6
Ift88Q61371 Gm12571-201ENSMUST00000118132 243 ntBASIC5.04□□□□□ -1.6
Ift88Q61371 Gm15659-201ENSMUST00000118881 341 ntBASIC5.04□□□□□ -1.6
Ift88Q61371 Gm12639-201ENSMUST00000121400 493 ntBASIC5.04□□□□□ -1.6
Ift88Q61371 Spin2-ps4-201ENSMUST00000126395 762 ntBASIC5.04□□□□□ -1.6
Ift88Q61371 Gm14426-201ENSMUST00000128562 249 ntTSL 3 BASIC5.04□□□□□ -1.6
Ift88Q61371 Olfr1177-ps-201ENSMUST00000137895 921 ntAPPRIS ALT2 BASIC5.04□□□□□ -1.6
Ift88Q61371 Spin2-ps3-201ENSMUST00000148147 762 ntBASIC5.04□□□□□ -1.6
Ift88Q61371 Gm22968-201ENSMUST00000157955 118 ntBASIC5.04□□□□□ -1.6
Ift88Q61371 Gm25660-201ENSMUST00000158470 104 ntBASIC5.04□□□□□ -1.6
Ift88Q61371 Gm17103-201ENSMUST00000168897 549 ntTSL 3 BASIC5.04□□□□□ -1.6
Ift88Q61371 Vmn1r-ps74-201ENSMUST00000173518 570 ntBASIC5.04□□□□□ -1.6
Ift88Q61371 Gm6214-201ENSMUST00000178845 541 ntBASIC5.04□□□□□ -1.6
Ift88Q61371 Gm4617-201ENSMUST00000178993 331 ntBASIC5.04□□□□□ -1.6
Ift88Q61371 Gm21232-201ENSMUST00000182187 1006 ntBASIC5.04□□□□□ -1.6
Ift88Q61371 Mir8118-201ENSMUST00000183962 129 ntBASIC5.04□□□□□ -1.6
Ift88Q61371 Gm28550-201ENSMUST00000189125 618 ntTSL 5 BASIC5.04□□□□□ -1.6
Ift88Q61371 1700023F02Rik-203ENSMUST00000189619 473 ntTSL 3 BASIC5.04□□□□□ -1.6
Ift88Q61371 1700015G11Rik-204ENSMUST00000190307 255 ntAPPRIS ALT2 TSL 3 BASIC5.04□□□□□ -1.6
Ift88Q61371 Gm28460-202ENSMUST00000190590 618 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Ift88Q61371 Gm29130-201ENSMUST00000191015 618 ntTSL 5 BASIC5.04□□□□□ -1.6
Ift88Q61371 Gm18752-202ENSMUST00000193627 587 ntTSL 3 BASIC5.04□□□□□ -1.6
Ift88Q61371 Gm7142-201ENSMUST00000194232 586 ntBASIC5.04□□□□□ -1.6
Ift88Q61371 Gm37815-201ENSMUST00000195665 411 ntTSL 5 BASIC5.04□□□□□ -1.6
Ift88Q61371 Gm37505-201ENSMUST00000195670 461 ntTSL 5 BASIC5.04□□□□□ -1.6
Ift88Q61371 1700052H01Rik-202ENSMUST00000196973 429 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Ift88Q61371 Gm44389-201ENSMUST00000203795 182 ntBASIC5.04□□□□□ -1.6
Ift88Q61371 Gm18410-201ENSMUST00000207199 577 ntBASIC5.04□□□□□ -1.6
Ift88Q61371 Gm44724-202ENSMUST00000208251 531 ntTSL 5 BASIC5.04□□□□□ -1.6
Ift88Q61371 Gm17779-201ENSMUST00000213395 394 ntBASIC5.04□□□□□ -1.6
Ift88Q61371 AC160966.1-201ENSMUST00000217147 933 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Ift88Q61371 Olfr894-201ENSMUST00000093866 949 ntAPPRIS P2 BASIC5.04□□□□□ -1.6
Ift88Q61371 Gm5458-201ENSMUST00000096121 997 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
Ift88Q61371 Hspd1-ps1-201ENSMUST00000203513 1670 ntBASIC5.04□□□□□ -1.6
Ift88Q61371 Vmn2r3-201ENSMUST00000170244 2670 ntAPPRIS P2 TSL 5 BASIC5.04□□□□□ -1.6
Ift88Q61371 Gm45223-201ENSMUST00000207037 5138 ntBASIC5.04□□□□□ -1.6
Ift88Q61371 Gm45160-201ENSMUST00000207112 3099 ntBASIC5.04□□□□□ -1.6
Ift88Q61371 Olfr1312-203ENSMUST00000213961 5345 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Ift88Q61371 Akr1c14-201ENSMUST00000041768 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Ift88Q61371 Ulbp1-203ENSMUST00000218087 5959 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Ift88Q61371 Gm18954-201ENSMUST00000222200 1792 ntBASIC5.04□□□□□ -1.6
Ift88Q61371 Zfp931-201ENSMUST00000108923 1372 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Ift88Q61371 Gm5615-201ENSMUST00000098900 2348 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Ift88Q61371 Gm13477-201ENSMUST00000121620 2687 ntBASIC5.03□□□□□ -1.6
Ift88Q61371 0610010F05Rik-202ENSMUST00000093267 3646 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
Ift88Q61371 Gm28964-202ENSMUST00000186771 1502 ntTSL 5 BASIC5.03□□□□□ -1.6
Ift88Q61371 Gm29301-202ENSMUST00000189344 1502 ntTSL 5 BASIC5.03□□□□□ -1.6
Ift88Q61371 Pramel6-201ENSMUST00000026956 1540 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Ift88Q61371 Gm5155-201ENSMUST00000072381 2841 ntBASIC5.03□□□□□ -1.6
Ift88Q61371 Vmn1r58-201ENSMUST00000108569 10140 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Ift88Q61371 Vmn2r-ps123-201ENSMUST00000176763 2410 ntBASIC5.03□□□□□ -1.6
Ift88Q61371 Cyld-204ENSMUST00000209206 4032 ntTSL 5 BASIC5.03□□□□□ -1.6
Ift88Q61371 Fam169a-202ENSMUST00000169863 6013 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Ift88Q61371 Olfr1073-ps1-201ENSMUST00000117635 381 ntBASIC5.03□□□□□ -1.6
Ift88Q61371 Gm13087-201ENSMUST00000118298 256 ntBASIC5.03□□□□□ -1.6
Ift88Q61371 Gm13501-201ENSMUST00000118477 979 ntBASIC5.03□□□□□ -1.6
Ift88Q61371 Hmgb1-ps1-201ENSMUST00000119350 634 ntBASIC5.03□□□□□ -1.6
Ift88Q61371 Gm7189-201ENSMUST00000119811 429 ntBASIC5.03□□□□□ -1.6
Ift88Q61371 Gm11891-201ENSMUST00000121241 619 ntBASIC5.03□□□□□ -1.6
Ift88Q61371 Gm7855-201ENSMUST00000137737 687 ntBASIC5.03□□□□□ -1.6
Ift88Q61371 Gm14549-201ENSMUST00000154993 1035 ntTSL 5 BASIC5.03□□□□□ -1.6
Ift88Q61371 Gm24965-201ENSMUST00000157922 106 ntBASIC5.03□□□□□ -1.6
Ift88Q61371 Scgb1b20-201ENSMUST00000166714 421 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
Ift88Q61371 Gm5139-201ENSMUST00000175943 249 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 73.8 ms