Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Ndst3-203ENSMUST00000132112 4460 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trim41Q5NCC3 Ube4a-202ENSMUST00000117549 3415 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Trim41Q5NCC3 Enox2-209ENSMUST00000167659 3632 ntTSL 5 BASIC10.17□□□□□ -0.78
Trim41Q5NCC3 Gm37254-201ENSMUST00000193542 3901 ntBASIC10.17□□□□□ -0.78
Trim41Q5NCC3 Gm25088-201ENSMUST00000101803 79 ntBASIC10.17□□□□□ -0.78
Trim41Q5NCC3 Gm5751-201ENSMUST00000115561 444 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Trim41Q5NCC3 Gm14428-201ENSMUST00000120408 822 ntBASIC10.17□□□□□ -0.78
Trim41Q5NCC3 Hmgb1-ps5-201ENSMUST00000121058 557 ntBASIC10.17□□□□□ -0.78
Trim41Q5NCC3 Gm20549-201ENSMUST00000174804 429 ntBASIC10.17□□□□□ -0.78
Trim41Q5NCC3 Gm32447-201ENSMUST00000194265 697 ntBASIC10.17□□□□□ -0.78
Trim41Q5NCC3 Gm40323-201ENSMUST00000200649 645 ntTSL 2 BASIC10.17□□□□□ -0.78
Trim41Q5NCC3 Ifitm6-203ENSMUST00000211330 813 ntAPPRIS ALT2 TSL 2 BASIC10.17□□□□□ -0.78
Trim41Q5NCC3 4930567H12Rik-202ENSMUST00000212512 766 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trim41Q5NCC3 Gm18587-201ENSMUST00000213736 841 ntBASIC10.17□□□□□ -0.78
Trim41Q5NCC3 Otor-201ENSMUST00000028902 949 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trim41Q5NCC3 Olfr235-201ENSMUST00000073507 1079 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Trim41Q5NCC3 Dph3b-ps-201ENSMUST00000076359 246 ntBASIC10.17□□□□□ -0.78
Trim41Q5NCC3 Gm37531-201ENSMUST00000191628 5415 ntBASIC10.17□□□□□ -0.78
Trim41Q5NCC3 Olfr1015-203ENSMUST00000215945 2479 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Trim41Q5NCC3 2700049A03Rik-201ENSMUST00000045907 4507 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trim41Q5NCC3 1700030N03Rik-203ENSMUST00000190575 3146 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trim41Q5NCC3 Gm38026-201ENSMUST00000193284 3880 ntBASIC10.17□□□□□ -0.78
Trim41Q5NCC3 Gm44113-201ENSMUST00000203510 3041 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trim41Q5NCC3 Nlrp10-201ENSMUST00000055745 4504 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trim41Q5NCC3 Gm5886-203ENSMUST00000203983 2613 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trim41Q5NCC3 Adam25-201ENSMUST00000096663 2621 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trim41Q5NCC3 Mfap3-201ENSMUST00000020830 4839 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trim41Q5NCC3 9430062P05Rik-201ENSMUST00000192703 3345 ntBASIC10.17□□□□□ -0.78
Trim41Q5NCC3 Frmpd4-203ENSMUST00000112147 8607 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trim41Q5NCC3 Irgm2-202ENSMUST00000108836 3459 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trim41Q5NCC3 Irgm2-201ENSMUST00000058704 3470 ntAPPRIS P2 TSL 2 BASIC10.16□□□□□ -0.78
Trim41Q5NCC3 Enpp2-202ENSMUST00000167541 2664 ntAPPRIS ALT1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trim41Q5NCC3 Gm43781-201ENSMUST00000197634 2681 ntBASIC10.16□□□□□ -0.78
Trim41Q5NCC3 Tulp4-201ENSMUST00000039655 9687 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trim41Q5NCC3 Gm45358-201ENSMUST00000209492 2305 ntBASIC10.16□□□□□ -0.78
Trim41Q5NCC3 Zfp994-201ENSMUST00000179996 4880 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Trim41Q5NCC3 Btbd35f21-201ENSMUST00000105017 1943 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Trim41Q5NCC3 Btbd35f27-201ENSMUST00000178143 1943 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Trim41Q5NCC3 Btbd35f16-201ENSMUST00000185755 1949 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Trim41Q5NCC3 Gm24160-201ENSMUST00000104594 126 ntBASIC10.16□□□□□ -0.78
Trim41Q5NCC3 Gm14541-201ENSMUST00000118985 157 ntBASIC10.16□□□□□ -0.78
Trim41Q5NCC3 Gm14578-201ENSMUST00000122166 391 ntBASIC10.16□□□□□ -0.78
Trim41Q5NCC3 Gm16157-201ENSMUST00000124813 534 ntTSL 3 BASIC10.16□□□□□ -0.78
Trim41Q5NCC3 Gm12519-201ENSMUST00000134099 693 ntTSL 5 BASIC10.16□□□□□ -0.78
Trim41Q5NCC3 4930555B12Rik-201ENSMUST00000135444 283 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trim41Q5NCC3 Gm23233-201ENSMUST00000157301 137 ntBASIC10.16□□□□□ -0.78
Trim41Q5NCC3 Gm3242-201ENSMUST00000171273 485 ntBASIC10.16□□□□□ -0.78
Trim41Q5NCC3 Mir6539-201ENSMUST00000183732 110 ntBASIC10.16□□□□□ -0.78
Trim41Q5NCC3 Gm37881-201ENSMUST00000193001 421 ntBASIC10.16□□□□□ -0.78
Trim41Q5NCC3 Gm38316-201ENSMUST00000194838 469 ntTSL 5 BASIC10.16□□□□□ -0.78
Trim41Q5NCC3 Gm7041-201ENSMUST00000201227 524 ntBASIC10.16□□□□□ -0.78
Trim41Q5NCC3 Gm44125-201ENSMUST00000203068 448 ntBASIC10.16□□□□□ -0.78
Trim41Q5NCC3 Gm18924-201ENSMUST00000211929 316 ntBASIC10.16□□□□□ -0.78
Trim41Q5NCC3 Gm29674-201ENSMUST00000218791 1139 ntTSL 5 BASIC10.16□□□□□ -0.78
Trim41Q5NCC3 AC091783.2-201ENSMUST00000224626 740 ntBASIC10.16□□□□□ -0.78
Trim41Q5NCC3 AC154788.1-201ENSMUST00000225003 340 ntBASIC10.16□□□□□ -0.78
Trim41Q5NCC3 Magea1-201ENSMUST00000078193 1108 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Trim41Q5NCC3 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trim41Q5NCC3 1700001G01Rik-201ENSMUST00000125117 1562 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trim41Q5NCC3 Gm10933-201ENSMUST00000221891 1861 ntBASIC10.16□□□□□ -0.78
Trim41Q5NCC3 A230103L15Rik-201ENSMUST00000207198 3872 ntBASIC10.16□□□□□ -0.78
Trim41Q5NCC3 Gm39139-202ENSMUST00000212621 5878 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trim41Q5NCC3 Otc-201ENSMUST00000049910 2319 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trim41Q5NCC3 AF366264-201ENSMUST00000071308 3157 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Trim41Q5NCC3 Vmn1r58-204ENSMUST00000228728 9991 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Trim41Q5NCC3 Zfp27-202ENSMUST00000159920 3381 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Trim41Q5NCC3 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trim41Q5NCC3 Gm3286-203ENSMUST00000201629 1945 ntAPPRIS P3 TSL 3 BASIC10.15□□□□□ -0.78
Trim41Q5NCC3 Tmem167-203ENSMUST00000161568 8689 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trim41Q5NCC3 Rag2-202ENSMUST00000111227 1857 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trim41Q5NCC3 Gm43490-201ENSMUST00000197593 2652 ntBASIC10.15□□□□□ -0.78
Trim41Q5NCC3 Kcnma1-201ENSMUST00000065788 4524 ntTSL 5 BASIC10.15□□□□□ -0.78
Trim41Q5NCC3 Pcdh11x-203ENSMUST00000113364 4454 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Trim41Q5NCC3 Gab3-203ENSMUST00000114109 2093 ntTSL 2 BASIC10.15□□□□□ -0.78
Trim41Q5NCC3 Kat7-201ENSMUST00000072621 3324 ntTSL 5 BASIC10.15□□□□□ -0.78
Trim41Q5NCC3 Gm22834-201ENSMUST00000102021 79 ntBASIC10.15□□□□□ -0.78
Trim41Q5NCC3 Gm15994-201ENSMUST00000118029 402 ntBASIC10.15□□□□□ -0.78
Trim41Q5NCC3 Gm7429-201ENSMUST00000118664 348 ntBASIC10.15□□□□□ -0.78
Trim41Q5NCC3 Gm12771-201ENSMUST00000120246 135 ntBASIC10.15□□□□□ -0.78
Trim41Q5NCC3 Gm13345-201ENSMUST00000121928 228 ntBASIC10.15□□□□□ -0.78
Trim41Q5NCC3 Gm23954-201ENSMUST00000157213 353 ntBASIC10.15□□□□□ -0.78
Trim41Q5NCC3 Smdt1-202ENSMUST00000159054 294 ntTSL 5 BASIC10.15□□□□□ -0.78
Trim41Q5NCC3 Gm10717-208ENSMUST00000179839 681 ntTSL 5 BASIC10.15□□□□□ -0.78
Trim41Q5NCC3 Rpl31-ps21-201ENSMUST00000181182 374 ntBASIC10.15□□□□□ -0.78
Trim41Q5NCC3 Gm42539-201ENSMUST00000197009 308 ntBASIC10.15□□□□□ -0.78
Trim41Q5NCC3 Mir7227-201ENSMUST00000200408 59 ntBASIC10.15□□□□□ -0.78
Trim41Q5NCC3 Gm39038-201ENSMUST00000206774 355 ntTSL 3 BASIC10.15□□□□□ -0.78
Trim41Q5NCC3 Olfr1202-203ENSMUST00000217059 1153 ntAPPRIS P1 TSL 3 BASIC10.15□□□□□ -0.78
Trim41Q5NCC3 Gm30262-201ENSMUST00000219137 791 ntTSL 5 BASIC10.15□□□□□ -0.78
Trim41Q5NCC3 AC167229.1-201ENSMUST00000220057 469 ntBASIC10.15□□□□□ -0.78
Trim41Q5NCC3 AC174776.1-201ENSMUST00000221509 405 ntBASIC10.15□□□□□ -0.78
Trim41Q5NCC3 Gm18618-201ENSMUST00000222211 473 ntBASIC10.15□□□□□ -0.78
Trim41Q5NCC3 AC174776.2-201ENSMUST00000222561 405 ntBASIC10.15□□□□□ -0.78
Trim41Q5NCC3 CT485612.2-201ENSMUST00000223014 151 ntBASIC10.15□□□□□ -0.78
Trim41Q5NCC3 Gm26206-201ENSMUST00000082908 110 ntBASIC10.15□□□□□ -0.78
Trim41Q5NCC3 Gm10717-204ENSMUST00000099056 669 ntTSL 5 BASIC10.15□□□□□ -0.78
Trim41Q5NCC3 Pgbd1-201ENSMUST00000099719 3283 ntAPPRIS P4 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trim41Q5NCC3 Gm14391-203ENSMUST00000109056 1956 ntTSL 3 BASIC10.15□□□□□ -0.78
Trim41Q5NCC3 Gm8401-201ENSMUST00000120248 1739 ntBASIC10.15□□□□□ -0.78
Trim41Q5NCC3 5530400K19Rik-201ENSMUST00000193511 1916 ntBASIC10.15□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 77 ms