Protein–RNA interactions for Protein: Q4QRL3

Ccdc88b, Coiled-coil domain-containing protein 88B, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88bQ4QRL3 Gm18194-201ENSMUST00000210455 481 ntBASIC6.23□□□□□ -1.41
Ccdc88bQ4QRL3 AC155237.2-201ENSMUST00000228487 478 ntBASIC6.23□□□□□ -1.41
Ccdc88bQ4QRL3 Lcn4-201ENSMUST00000028283 774 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Ccdc88bQ4QRL3 Erbin-207ENSMUST00000191275 5552 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
Ccdc88bQ4QRL3 Gm43024-201ENSMUST00000196770 4352 ntBASIC6.22□□□□□ -1.41
Ccdc88bQ4QRL3 Gm45352-201ENSMUST00000210140 1452 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Ccdc88bQ4QRL3 Acbd7-201ENSMUST00000115089 531 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Ccdc88bQ4QRL3 Gm12125-201ENSMUST00000117261 736 ntBASIC6.22□□□□□ -1.41
Ccdc88bQ4QRL3 Dnaic1-202ENSMUST00000119127 500 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Ccdc88bQ4QRL3 Fam107b-206ENSMUST00000176254 300 ntTSL 5 BASIC6.22□□□□□ -1.41
Ccdc88bQ4QRL3 Gm26556-201ENSMUST00000180645 320 ntBASIC6.22□□□□□ -1.41
Ccdc88bQ4QRL3 Gm28186-201ENSMUST00000187447 679 ntBASIC6.22□□□□□ -1.41
Ccdc88bQ4QRL3 Gm29044-201ENSMUST00000188916 283 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Ccdc88bQ4QRL3 Gm36934-201ENSMUST00000192007 306 ntBASIC6.22□□□□□ -1.41
Ccdc88bQ4QRL3 Gm42832-201ENSMUST00000196361 745 ntBASIC6.22□□□□□ -1.41
Ccdc88bQ4QRL3 Gm45020-201ENSMUST00000205356 381 ntTSL 3 BASIC6.22□□□□□ -1.41
Ccdc88bQ4QRL3 Gm44773-201ENSMUST00000207374 557 ntBASIC6.22□□□□□ -1.41
Ccdc88bQ4QRL3 Cxcl15-201ENSMUST00000031322 2127 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Ccdc88bQ4QRL3 Gm4987-201ENSMUST00000078326 408 ntBASIC6.22□□□□□ -1.41
Ccdc88bQ4QRL3 Gm8724-201ENSMUST00000081668 483 ntBASIC6.22□□□□□ -1.41
Ccdc88bQ4QRL3 Med13-201ENSMUST00000043624 10546 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
Ccdc88bQ4QRL3 Foxr2-201ENSMUST00000096265 3210 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Ccdc88bQ4QRL3 Epgn-201ENSMUST00000041516 1760 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Ccdc88bQ4QRL3 Gm37777-201ENSMUST00000195546 3366 ntBASIC6.22□□□□□ -1.41
Ccdc88bQ4QRL3 Olfr1480-202ENSMUST00000207093 1819 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Ccdc88bQ4QRL3 Olfr1480-204ENSMUST00000207987 1804 ntTSL 3 BASIC6.22□□□□□ -1.41
Ccdc88bQ4QRL3 Olfr1331-202ENSMUST00000106360 3230 ntAPPRIS P2 TSL 5 BASIC6.22□□□□□ -1.41
Ccdc88bQ4QRL3 Vmn1r87-203ENSMUST00000227443 5319 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Ccdc88bQ4QRL3 Polk-205ENSMUST00000221899 2319 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Ccdc88bQ4QRL3 Gm5248-201ENSMUST00000186108 4046 ntBASIC6.22□□□□□ -1.41
Ccdc88bQ4QRL3 Vmn2r-ps34-202ENSMUST00000204750 1671 ntBASIC6.22□□□□□ -1.41
Ccdc88bQ4QRL3 Olfr1440-205ENSMUST00000216145 7542 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Ccdc88bQ4QRL3 Pik3c2a-201ENSMUST00000170430 8044 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Ccdc88bQ4QRL3 Gm11869-201ENSMUST00000118701 329 ntBASIC6.22□□□□□ -1.41
Ccdc88bQ4QRL3 Gm25860-201ENSMUST00000158252 126 ntBASIC6.22□□□□□ -1.41
Ccdc88bQ4QRL3 Gm16566-201ENSMUST00000160387 910 ntBASIC6.22□□□□□ -1.41
Ccdc88bQ4QRL3 Gm17210-201ENSMUST00000169975 391 ntTSL 3 BASIC6.22□□□□□ -1.41
Ccdc88bQ4QRL3 Gm20177-201ENSMUST00000203705 334 ntBASIC6.22□□□□□ -1.41
Ccdc88bQ4QRL3 Gm7639-201ENSMUST00000212608 484 ntBASIC6.22□□□□□ -1.41
Ccdc88bQ4QRL3 Vmn1r217-203ENSMUST00000228656 9767 ntAPPRIS P1 BASIC6.21□□□□□ -1.41
Ccdc88bQ4QRL3 Gm14295-202ENSMUST00000132883 2505 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Ccdc88bQ4QRL3 Adam34-201ENSMUST00000110411 2584 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Ccdc88bQ4QRL3 Gm42801-201ENSMUST00000202562 2865 ntBASIC6.21□□□□□ -1.42
Ccdc88bQ4QRL3 Olfr1130-202ENSMUST00000216580 2648 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Ccdc88bQ4QRL3 Satl1-201ENSMUST00000026601 2412 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Ccdc88bQ4QRL3 Olfr1487-205ENSMUST00000217061 4080 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Ccdc88bQ4QRL3 Gm15986-201ENSMUST00000122153 400 ntBASIC6.21□□□□□ -1.42
Ccdc88bQ4QRL3 Gm13943-201ENSMUST00000144043 343 ntTSL 5 BASIC6.21□□□□□ -1.42
Ccdc88bQ4QRL3 Gm15961-201ENSMUST00000156090 266 ntTSL 3 BASIC6.21□□□□□ -1.42
Ccdc88bQ4QRL3 Gm23326-201ENSMUST00000157419 105 ntBASIC6.21□□□□□ -1.42
Ccdc88bQ4QRL3 Gm27903-201ENSMUST00000175482 126 ntBASIC6.21□□□□□ -1.42
Ccdc88bQ4QRL3 Obox4-ps29-201ENSMUST00000175956 1134 ntBASIC6.21□□□□□ -1.42
Ccdc88bQ4QRL3 Gm28941-201ENSMUST00000185536 1017 ntBASIC6.21□□□□□ -1.42
Ccdc88bQ4QRL3 Gm19073-201ENSMUST00000219978 555 ntBASIC6.21□□□□□ -1.42
Ccdc88bQ4QRL3 Skint2-201ENSMUST00000058791 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Ccdc88bQ4QRL3 Olfr919-201ENSMUST00000071425 948 ntAPPRIS P2 BASIC6.21□□□□□ -1.42
Ccdc88bQ4QRL3 Abi3bp-204ENSMUST00000171000 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Ccdc88bQ4QRL3 Olfr1323-203ENSMUST00000213556 5431 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Ccdc88bQ4QRL3 Gm14781-201ENSMUST00000078469 1360 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Ccdc88bQ4QRL3 Mageb5-201ENSMUST00000082048 1357 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Ccdc88bQ4QRL3 Slc5a3-201ENSMUST00000113975 10913 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Ccdc88bQ4QRL3 Gm7073-203ENSMUST00000190178 1419 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Ccdc88bQ4QRL3 Angpt1-201ENSMUST00000022921 4260 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Ccdc88bQ4QRL3 Cdh19-201ENSMUST00000094626 3914 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Ccdc88bQ4QRL3 Slco1a5-201ENSMUST00000081380 2572 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Ccdc88bQ4QRL3 Peli1-202ENSMUST00000101477 3703 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Ccdc88bQ4QRL3 Olfr1270-205ENSMUST00000216354 4836 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Ccdc88bQ4QRL3 Olfr1270-206ENSMUST00000217139 4803 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Ccdc88bQ4QRL3 Gm28924-201ENSMUST00000190012 241 ntBASIC6.2□□□□□ -1.42
Ccdc88bQ4QRL3 Vmn1r206-202ENSMUST00000227244 3970 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Ccdc88bQ4QRL3 1700049E17Rik1-201ENSMUST00000095985 1761 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
Ccdc88bQ4QRL3 Olfr1012-202ENSMUST00000214255 3115 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Ccdc88bQ4QRL3 Slc22a30-201ENSMUST00000064507 1888 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Ccdc88bQ4QRL3 Olfr536-205ENSMUST00000215768 4231 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Ccdc88bQ4QRL3 Olfr418-202ENSMUST00000213420 4388 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Ccdc88bQ4QRL3 Olfr1118-202ENSMUST00000216396 4976 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Ccdc88bQ4QRL3 Olfr1034-201ENSMUST00000213496 4882 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Ccdc88bQ4QRL3 Vmn1r30-205ENSMUST00000228635 1776 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Ccdc88bQ4QRL3 Gm37461-201ENSMUST00000193929 3704 ntBASIC6.19□□□□□ -1.42
Ccdc88bQ4QRL3 Gm7853-201ENSMUST00000100708 478 ntBASIC6.19□□□□□ -1.42
Ccdc88bQ4QRL3 Gm6760-201ENSMUST00000114682 604 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ccdc88bQ4QRL3 Gm13664-201ENSMUST00000117304 345 ntBASIC6.19□□□□□ -1.42
Ccdc88bQ4QRL3 Gm11746-201ENSMUST00000119843 821 ntBASIC6.19□□□□□ -1.42
Ccdc88bQ4QRL3 Gm11623-201ENSMUST00000120176 1225 ntBASIC6.19□□□□□ -1.42
Ccdc88bQ4QRL3 Gm15212-201ENSMUST00000122403 466 ntBASIC6.19□□□□□ -1.42
Ccdc88bQ4QRL3 Gm23773-201ENSMUST00000158985 296 ntBASIC6.19□□□□□ -1.42
Ccdc88bQ4QRL3 Gm3646-201ENSMUST00000171319 352 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ccdc88bQ4QRL3 Ptma-ps1-201ENSMUST00000181079 309 ntBASIC6.19□□□□□ -1.42
Ccdc88bQ4QRL3 Gm18505-201ENSMUST00000187360 790 ntBASIC6.19□□□□□ -1.42
Ccdc88bQ4QRL3 Mug-ps1-203ENSMUST00000190643 655 ntTSL 3 BASIC6.19□□□□□ -1.42
Ccdc88bQ4QRL3 2210017I01Rik-201ENSMUST00000195278 822 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ccdc88bQ4QRL3 Gm44355-201ENSMUST00000200417 104 ntBASIC6.19□□□□□ -1.42
Ccdc88bQ4QRL3 Gm15927-204ENSMUST00000206075 372 ntTSL 3 BASIC6.19□□□□□ -1.42
Ccdc88bQ4QRL3 Olfr1480-203ENSMUST00000207904 1209 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
Ccdc88bQ4QRL3 Vmn2r76-201ENSMUST00000165771 2562 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Ccdc88bQ4QRL3 Gm44527-202ENSMUST00000204519 1314 ntBASIC6.19□□□□□ -1.42
Ccdc88bQ4QRL3 Gm37983-201ENSMUST00000193207 2006 ntBASIC6.19□□□□□ -1.42
Ccdc88bQ4QRL3 Gm42870-201ENSMUST00000199355 3470 ntBASIC6.19□□□□□ -1.42
Ccdc88bQ4QRL3 Xist-201ENSMUST00000127786 17769 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Ccdc88bQ4QRL3 Olfr642-202ENSMUST00000214299 4715 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 114.9 ms