Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Gm42516-201ENSMUST00000198691 767 ntBASIC3.99□□□□□ -1.77
Trim40Q3UWA4 Gm36382-201ENSMUST00000198892 541 ntBASIC3.99□□□□□ -1.77
Trim40Q3UWA4 Gm43309-201ENSMUST00000200837 458 ntBASIC3.99□□□□□ -1.77
Trim40Q3UWA4 Gm8774-201ENSMUST00000203621 692 ntBASIC3.99□□□□□ -1.77
Trim40Q3UWA4 1700095K22Rik-201ENSMUST00000206808 282 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Trim40Q3UWA4 Gm45317-201ENSMUST00000210385 223 ntBASIC3.99□□□□□ -1.77
Trim40Q3UWA4 AC138284.5-201ENSMUST00000214389 652 ntBASIC3.99□□□□□ -1.77
Trim40Q3UWA4 AC160970.1-201ENSMUST00000219311 475 ntBASIC3.99□□□□□ -1.77
Trim40Q3UWA4 AC132384.13-201ENSMUST00000219556 1159 ntBASIC3.99□□□□□ -1.77
Trim40Q3UWA4 Gm35041-201ENSMUST00000219581 602 ntTSL 3 BASIC3.99□□□□□ -1.77
Trim40Q3UWA4 Gm6049-201ENSMUST00000222369 458 ntBASIC3.99□□□□□ -1.77
Trim40Q3UWA4 CT009733.1-201ENSMUST00000225322 425 ntBASIC3.99□□□□□ -1.77
Trim40Q3UWA4 AC159242.1-201ENSMUST00000225832 194 ntBASIC3.99□□□□□ -1.77
Trim40Q3UWA4 AC102815.1-201ENSMUST00000226662 1061 ntBASIC3.99□□□□□ -1.77
Trim40Q3UWA4 AC134335.1-201ENSMUST00000227626 329 ntBASIC3.99□□□□□ -1.77
Trim40Q3UWA4 Vmn1r26-201ENSMUST00000049694 1020 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Trim40Q3UWA4 Gm7204-201ENSMUST00000062591 600 ntBASIC3.99□□□□□ -1.77
Trim40Q3UWA4 Hamp-201ENSMUST00000062620 410 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Trim40Q3UWA4 Snord14e-201ENSMUST00000082857 90 ntBASIC3.99□□□□□ -1.77
Trim40Q3UWA4 Gm24871-201ENSMUST00000083099 116 ntBASIC3.99□□□□□ -1.77
Trim40Q3UWA4 Rnu5g-201ENSMUST00000093721 116 ntBASIC3.99□□□□□ -1.77
Trim40Q3UWA4 Rmi1-202ENSMUST00000224479 4212 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Trim40Q3UWA4 Olfr107-205ENSMUST00000216844 4021 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Trim40Q3UWA4 Fbxw28-201ENSMUST00000112039 1497 ntAPPRIS P4 TSL 1 (best) BASIC3.98□□□□□ -1.77
Trim40Q3UWA4 Olfr516-202ENSMUST00000216092 1493 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Trim40Q3UWA4 AC155922.2-201ENSMUST00000220240 1458 ntTSL 5 BASIC3.98□□□□□ -1.77
Trim40Q3UWA4 Olfr665-203ENSMUST00000216257 2298 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Trim40Q3UWA4 AC167420.1-201ENSMUST00000222999 2121 ntBASIC3.98□□□□□ -1.77
Trim40Q3UWA4 Gm37498-201ENSMUST00000193524 4002 ntBASIC3.98□□□□□ -1.77
Trim40Q3UWA4 Vsig4-201ENSMUST00000050707 1432 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Trim40Q3UWA4 Gm24340-201ENSMUST00000104208 97 ntBASIC3.98□□□□□ -1.77
Trim40Q3UWA4 Gm11914-201ENSMUST00000117094 507 ntBASIC3.98□□□□□ -1.77
Trim40Q3UWA4 Gm12719-201ENSMUST00000118859 241 ntBASIC3.98□□□□□ -1.77
Trim40Q3UWA4 Gm11890-201ENSMUST00000119585 417 ntBASIC3.98□□□□□ -1.77
Trim40Q3UWA4 Rab9b-ps1-201ENSMUST00000119785 606 ntBASIC3.98□□□□□ -1.77
Trim40Q3UWA4 Sult1b1-203ENSMUST00000120150 1213 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Trim40Q3UWA4 Gm6373-201ENSMUST00000121026 360 ntBASIC3.98□□□□□ -1.77
Trim40Q3UWA4 Clec2f-201ENSMUST00000121051 374 ntBASIC3.98□□□□□ -1.77
Trim40Q3UWA4 Gm13676-201ENSMUST00000122185 591 ntBASIC3.98□□□□□ -1.77
Trim40Q3UWA4 Gm4487-201ENSMUST00000150617 442 ntBASIC3.98□□□□□ -1.77
Trim40Q3UWA4 Gm25971-201ENSMUST00000158953 286 ntBASIC3.98□□□□□ -1.77
Trim40Q3UWA4 Glipr1-204ENSMUST00000162508 1183 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Trim40Q3UWA4 Clec9a-203ENSMUST00000164513 714 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
Trim40Q3UWA4 Gm17194-201ENSMUST00000164610 348 ntBASIC3.98□□□□□ -1.77
Trim40Q3UWA4 Gm8224-201ENSMUST00000166178 497 ntBASIC3.98□□□□□ -1.77
Trim40Q3UWA4 Gm22693-201ENSMUST00000175049 442 ntBASIC3.98□□□□□ -1.77
Trim40Q3UWA4 Gm5798-202ENSMUST00000179987 582 ntTSL 3 BASIC3.98□□□□□ -1.77
Trim40Q3UWA4 2310031A07Rik-201ENSMUST00000181212 990 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Trim40Q3UWA4 Gm4707-202ENSMUST00000183937 276 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Trim40Q3UWA4 1700109I08Rik-201ENSMUST00000185680 396 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Trim40Q3UWA4 Scgb2b5-ps-201ENSMUST00000190227 270 ntBASIC3.98□□□□□ -1.77
Trim40Q3UWA4 Gm37961-201ENSMUST00000192729 299 ntBASIC3.98□□□□□ -1.77
Trim40Q3UWA4 Gm30097-201ENSMUST00000193581 447 ntTSL 5 BASIC3.98□□□□□ -1.77
Trim40Q3UWA4 Gm9931-201ENSMUST00000193584 1185 ntBASIC3.98□□□□□ -1.77
Trim40Q3UWA4 Gm19237-201ENSMUST00000205036 1132 ntBASIC3.98□□□□□ -1.77
Trim40Q3UWA4 Gm44736-201ENSMUST00000205943 667 ntTSL 3 BASIC3.98□□□□□ -1.77
Trim40Q3UWA4 C430039J01Rik-201ENSMUST00000205973 957 ntBASIC3.98□□□□□ -1.77
Trim40Q3UWA4 Gm45031-201ENSMUST00000206800 288 ntBASIC3.98□□□□□ -1.77
Trim40Q3UWA4 Gm18877-201ENSMUST00000207706 539 ntBASIC3.98□□□□□ -1.77
Trim40Q3UWA4 Gm7407-201ENSMUST00000208301 568 ntBASIC3.98□□□□□ -1.77
Trim40Q3UWA4 Gm17917-201ENSMUST00000218561 953 ntBASIC3.98□□□□□ -1.77
Trim40Q3UWA4 AC153961.2-201ENSMUST00000218877 164 ntBASIC3.98□□□□□ -1.77
Trim40Q3UWA4 AC165164.2-201ENSMUST00000220313 392 ntTSL 3 BASIC3.98□□□□□ -1.77
Trim40Q3UWA4 Gm46401-202ENSMUST00000223425 803 ntTSL 5 BASIC3.98□□□□□ -1.77
Trim40Q3UWA4 AC174797.4-201ENSMUST00000225510 347 ntBASIC3.98□□□□□ -1.77
Trim40Q3UWA4 Olfr867-201ENSMUST00000060780 996 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Trim40Q3UWA4 Olfr1465-201ENSMUST00000080142 924 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Trim40Q3UWA4 n-R5s173-201ENSMUST00000082620 119 ntBASIC3.98□□□□□ -1.77
Trim40Q3UWA4 Gm5152-202ENSMUST00000088625 417 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Trim40Q3UWA4 Olfr1278-201ENSMUST00000090330 942 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Trim40Q3UWA4 Tas2r115-201ENSMUST00000095394 1033 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Trim40Q3UWA4 Olfr677-201ENSMUST00000098161 939 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Trim40Q3UWA4 2410012E07Rik-201ENSMUST00000190896 1357 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Trim40Q3UWA4 Arrdc3-201ENSMUST00000099356 4101 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Trim40Q3UWA4 Klhl13-201ENSMUST00000035973 2996 ntTSL 5 BASIC3.98□□□□□ -1.77
Trim40Q3UWA4 Gm38375-201ENSMUST00000194610 2227 ntBASIC3.98□□□□□ -1.77
Trim40Q3UWA4 Olfr235-204ENSMUST00000214613 2217 ntAPPRIS P1 TSL 3 BASIC3.98□□□□□ -1.77
Trim40Q3UWA4 Olfr1484-204ENSMUST00000216014 3842 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
Trim40Q3UWA4 Gm5248-201ENSMUST00000186108 4046 ntBASIC3.98□□□□□ -1.77
Trim40Q3UWA4 AC153150.1-201ENSMUST00000226065 3782 ntBASIC3.98□□□□□ -1.77
Trim40Q3UWA4 Gm37527-201ENSMUST00000192406 3547 ntBASIC3.98□□□□□ -1.77
Trim40Q3UWA4 Zfp990-201ENSMUST00000105741 3044 ntAPPRIS P1 TSL 3 BASIC3.97□□□□□ -1.77
Trim40Q3UWA4 Ptprz1-201ENSMUST00000090568 8068 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
Trim40Q3UWA4 Gm8744-201ENSMUST00000204475 3581 ntBASIC3.97□□□□□ -1.77
Trim40Q3UWA4 Slco6d1-202ENSMUST00000160796 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
Trim40Q3UWA4 Hdx-201ENSMUST00000038472 9385 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Trim40Q3UWA4 Slfn8-201ENSMUST00000038141 4011 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Trim40Q3UWA4 Gm42528-201ENSMUST00000200697 3418 ntBASIC3.97□□□□□ -1.77
Trim40Q3UWA4 Dnase2b-201ENSMUST00000029836 2566 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Trim40Q3UWA4 Gm15403-201ENSMUST00000119343 1227 ntBASIC3.97□□□□□ -1.77
Trim40Q3UWA4 Gm14926-201ENSMUST00000120650 508 ntBASIC3.97□□□□□ -1.77
Trim40Q3UWA4 Gm13865-201ENSMUST00000120957 865 ntBASIC3.97□□□□□ -1.77
Trim40Q3UWA4 Gm13459-201ENSMUST00000121558 646 ntBASIC3.97□□□□□ -1.77
Trim40Q3UWA4 4933416I08Rik-201ENSMUST00000125315 703 ntBASIC3.97□□□□□ -1.77
Trim40Q3UWA4 Gm12111-201ENSMUST00000150073 349 ntTSL 3 BASIC3.97□□□□□ -1.77
Trim40Q3UWA4 Gm26171-201ENSMUST00000158422 131 ntBASIC3.97□□□□□ -1.77
Trim40Q3UWA4 Gm25906-201ENSMUST00000158489 126 ntBASIC3.97□□□□□ -1.77
Trim40Q3UWA4 Gm7335-201ENSMUST00000172475 373 ntBASIC3.97□□□□□ -1.77
Trim40Q3UWA4 Vmn2r-ps85-201ENSMUST00000174022 940 ntBASIC3.97□□□□□ -1.77
Trim40Q3UWA4 Obox4-ps15-201ENSMUST00000178057 1140 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 95.8 ms