Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Olfr998-201ENSMUST00000052307 1012 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Upf3aQ3ULJ3 Cldn34c4-201ENSMUST00000052500 814 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Upf3aQ3ULJ3 4933400A11Rik-201ENSMUST00000068874 1230 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Upf3aQ3ULJ3 Macc1-205ENSMUST00000222784 4710 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Upf3aQ3ULJ3 Gm16794-203ENSMUST00000185324 1490 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Upf3aQ3ULJ3 Gm7988-201ENSMUST00000196623 2297 ntBASIC4.28□□□□□ -1.72
Upf3aQ3ULJ3 Vmn2r38-201ENSMUST00000108554 3663 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Upf3aQ3ULJ3 Olfr1298-202ENSMUST00000208284 1563 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Upf3aQ3ULJ3 Gm14014-201ENSMUST00000156718 2717 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Upf3aQ3ULJ3 Gm11829-201ENSMUST00000121003 282 ntBASIC4.27□□□□□ -1.73
Upf3aQ3ULJ3 Gm11645-201ENSMUST00000121589 649 ntBASIC4.27□□□□□ -1.73
Upf3aQ3ULJ3 Gm11403-201ENSMUST00000122195 369 ntBASIC4.27□□□□□ -1.73
Upf3aQ3ULJ3 Gm22730-201ENSMUST00000158085 171 ntBASIC4.27□□□□□ -1.73
Upf3aQ3ULJ3 Gm22158-201ENSMUST00000158411 126 ntBASIC4.27□□□□□ -1.73
Upf3aQ3ULJ3 Gm22889-201ENSMUST00000158639 58 ntBASIC4.27□□□□□ -1.73
Upf3aQ3ULJ3 Vmn1r227-202ENSMUST00000179914 1026 ntBASIC4.27□□□□□ -1.73
Upf3aQ3ULJ3 Gm43574-201ENSMUST00000196226 809 ntTSL 3 BASIC4.27□□□□□ -1.73
Upf3aQ3ULJ3 Gm43825-201ENSMUST00000199650 734 ntBASIC4.27□□□□□ -1.73
Upf3aQ3ULJ3 Gm43925-201ENSMUST00000203498 206 ntBASIC4.27□□□□□ -1.73
Upf3aQ3ULJ3 Gm7380-201ENSMUST00000211599 466 ntBASIC4.27□□□□□ -1.73
Upf3aQ3ULJ3 AC140368.1-202ENSMUST00000226131 658 ntBASIC4.27□□□□□ -1.73
Upf3aQ3ULJ3 Vmn1r179-201ENSMUST00000049819 972 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Upf3aQ3ULJ3 Olfr803-201ENSMUST00000056736 927 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Upf3aQ3ULJ3 Olfr509-201ENSMUST00000061690 1075 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Upf3aQ3ULJ3 Mir215-201ENSMUST00000083628 112 ntBASIC4.27□□□□□ -1.73
Upf3aQ3ULJ3 Gm37626-201ENSMUST00000194332 4563 ntBASIC4.27□□□□□ -1.73
Upf3aQ3ULJ3 Vmn1r215-202ENSMUST00000228092 2790 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Upf3aQ3ULJ3 Gm13230-201ENSMUST00000120870 1575 ntBASIC4.27□□□□□ -1.73
Upf3aQ3ULJ3 Gm45884-201ENSMUST00000209540 3416 ntBASIC4.27□□□□□ -1.73
Upf3aQ3ULJ3 Olfr301-201ENSMUST00000174362 1937 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
Upf3aQ3ULJ3 Gm35191-201ENSMUST00000200925 2475 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Upf3aQ3ULJ3 Olfr1184-202ENSMUST00000216675 3164 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Upf3aQ3ULJ3 Gm15783-201ENSMUST00000117521 633 ntBASIC4.26□□□□□ -1.73
Upf3aQ3ULJ3 Gm6893-201ENSMUST00000118385 522 ntBASIC4.26□□□□□ -1.73
Upf3aQ3ULJ3 Gm15361-201ENSMUST00000119320 444 ntBASIC4.26□□□□□ -1.73
Upf3aQ3ULJ3 Gm12458-201ENSMUST00000119387 495 ntBASIC4.26□□□□□ -1.73
Upf3aQ3ULJ3 Gm25806-201ENSMUST00000122782 122 ntBASIC4.26□□□□□ -1.73
Upf3aQ3ULJ3 Gm13599-201ENSMUST00000134476 678 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Upf3aQ3ULJ3 Olfr367-ps-202ENSMUST00000143957 942 ntBASIC4.26□□□□□ -1.73
Upf3aQ3ULJ3 Gm14246-201ENSMUST00000155173 680 ntTSL 3 BASIC4.26□□□□□ -1.73
Upf3aQ3ULJ3 Gm25966-201ENSMUST00000157169 117 ntBASIC4.26□□□□□ -1.73
Upf3aQ3ULJ3 Gm25572-201ENSMUST00000157527 172 ntBASIC4.26□□□□□ -1.73
Upf3aQ3ULJ3 Vmn1r128-201ENSMUST00000169165 924 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Upf3aQ3ULJ3 Vmn2r-ps122-201ENSMUST00000176687 906 ntBASIC4.26□□□□□ -1.73
Upf3aQ3ULJ3 Gm28263-201ENSMUST00000185884 400 ntBASIC4.26□□□□□ -1.73
Upf3aQ3ULJ3 Scgb2b28-ps-201ENSMUST00000188974 337 ntBASIC4.26□□□□□ -1.73
Upf3aQ3ULJ3 Gm29598-201ENSMUST00000188996 588 ntBASIC4.26□□□□□ -1.73
Upf3aQ3ULJ3 Igkv8-31-201ENSMUST00000200040 372 ntBASIC4.26□□□□□ -1.73
Upf3aQ3ULJ3 Gm44784-201ENSMUST00000207396 460 ntTSL 5 BASIC4.26□□□□□ -1.73
Upf3aQ3ULJ3 Olfr673-ps1-201ENSMUST00000210859 411 ntBASIC4.26□□□□□ -1.73
Upf3aQ3ULJ3 Gstz1-204ENSMUST00000222222 724 ntAPPRIS ALT1 TSL 2 BASIC4.26□□□□□ -1.73
Upf3aQ3ULJ3 AC154368.1-201ENSMUST00000223465 205 ntTSL 5 BASIC4.26□□□□□ -1.73
Upf3aQ3ULJ3 AC158142.3-201ENSMUST00000226230 675 ntBASIC4.26□□□□□ -1.73
Upf3aQ3ULJ3 AC144798.1-201ENSMUST00000228120 391 ntBASIC4.26□□□□□ -1.73
Upf3aQ3ULJ3 Ly6a-201ENSMUST00000023248 819 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Upf3aQ3ULJ3 Olfr768-201ENSMUST00000063031 939 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Upf3aQ3ULJ3 Olfr811-201ENSMUST00000076437 960 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Upf3aQ3ULJ3 Gm25200-201ENSMUST00000083094 130 ntBASIC4.26□□□□□ -1.73
Upf3aQ3ULJ3 Olfr477-201ENSMUST00000091605 933 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Upf3aQ3ULJ3 Zfp788-201ENSMUST00000045720 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
Upf3aQ3ULJ3 Gm14325-201ENSMUST00000108939 1576 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
Upf3aQ3ULJ3 Ccser2-201ENSMUST00000067700 7334 ntTSL 5 BASIC4.26□□□□□ -1.73
Upf3aQ3ULJ3 Zfp583-206ENSMUST00000165705 1707 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Upf3aQ3ULJ3 Vmn1r216-203ENSMUST00000228389 10213 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Upf3aQ3ULJ3 Gm37345-201ENSMUST00000193062 3138 ntBASIC4.26□□□□□ -1.73
Upf3aQ3ULJ3 Gm37718-201ENSMUST00000191655 2631 ntBASIC4.25□□□□□ -1.73
Upf3aQ3ULJ3 Gm37124-201ENSMUST00000192140 1992 ntBASIC4.25□□□□□ -1.73
Upf3aQ3ULJ3 Cysltr1-202ENSMUST00000113480 5142 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Upf3aQ3ULJ3 Nat1-201ENSMUST00000026677 1347 ntAPPRIS P2 BASIC4.25□□□□□ -1.73
Upf3aQ3ULJ3 Olfr951-202ENSMUST00000216107 1947 ntAPPRIS ALT2 TSL 3 BASIC4.25□□□□□ -1.73
Upf3aQ3ULJ3 Pkhd1l1-203ENSMUST00000209244 12949 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Upf3aQ3ULJ3 Zfp595-201ENSMUST00000109735 3896 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
Upf3aQ3ULJ3 Ocrl-202ENSMUST00000115013 2910 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Upf3aQ3ULJ3 Gm13532-201ENSMUST00000120373 240 ntBASIC4.25□□□□□ -1.73
Upf3aQ3ULJ3 Gm15014-201ENSMUST00000120742 258 ntBASIC4.25□□□□□ -1.73
Upf3aQ3ULJ3 Gm15141-201ENSMUST00000121860 729 ntBASIC4.25□□□□□ -1.73
Upf3aQ3ULJ3 Gm11958-201ENSMUST00000127224 253 ntTSL 5 BASIC4.25□□□□□ -1.73
Upf3aQ3ULJ3 Gm3160-201ENSMUST00000128343 607 ntBASIC4.25□□□□□ -1.73
Upf3aQ3ULJ3 Gm22968-201ENSMUST00000157955 118 ntBASIC4.25□□□□□ -1.73
Upf3aQ3ULJ3 Gm20476-201ENSMUST00000172644 492 ntTSL 2 BASIC4.25□□□□□ -1.73
Upf3aQ3ULJ3 Spin2g-201ENSMUST00000178425 687 ntBASIC4.25□□□□□ -1.73
Upf3aQ3ULJ3 Cldn34b4-202ENSMUST00000178974 881 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Upf3aQ3ULJ3 Scgb2a2-201ENSMUST00000179814 1107 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Upf3aQ3ULJ3 4831440E17Rik-201ENSMUST00000181942 1028 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Upf3aQ3ULJ3 Mir6385-201ENSMUST00000184295 105 ntBASIC4.25□□□□□ -1.73
Upf3aQ3ULJ3 Gm19503-201ENSMUST00000187109 241 ntBASIC4.25□□□□□ -1.73
Upf3aQ3ULJ3 Gm37603-201ENSMUST00000192368 219 ntBASIC4.25□□□□□ -1.73
Upf3aQ3ULJ3 Gm37164-201ENSMUST00000192809 637 ntBASIC4.25□□□□□ -1.73
Upf3aQ3ULJ3 Gm37676-201ENSMUST00000195496 507 ntBASIC4.25□□□□□ -1.73
Upf3aQ3ULJ3 Gm44376-201ENSMUST00000197570 128 ntBASIC4.25□□□□□ -1.73
Upf3aQ3ULJ3 Gm45160-201ENSMUST00000207112 3099 ntBASIC4.25□□□□□ -1.73
Upf3aQ3ULJ3 Olfr823-202ENSMUST00000213145 1431 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Upf3aQ3ULJ3 Gm18487-201ENSMUST00000215826 878 ntBASIC4.25□□□□□ -1.73
Upf3aQ3ULJ3 AC171204.1-201ENSMUST00000215867 975 ntTSL 5 BASIC4.25□□□□□ -1.73
Upf3aQ3ULJ3 Olfr970-203ENSMUST00000215922 1739 ntAPPRIS P1 TSL 3 BASIC4.25□□□□□ -1.73
Upf3aQ3ULJ3 4930401A07Rik-202ENSMUST00000216155 360 ntTSL 2 BASIC4.25□□□□□ -1.73
Upf3aQ3ULJ3 AC118733.1-201ENSMUST00000217387 1217 ntBASIC4.25□□□□□ -1.73
Upf3aQ3ULJ3 AC126253.2-201ENSMUST00000226518 205 ntBASIC4.25□□□□□ -1.73
Upf3aQ3ULJ3 AC154727.1-201ENSMUST00000226537 499 ntBASIC4.25□□□□□ -1.73
Upf3aQ3ULJ3 Olfr611-201ENSMUST00000078108 972 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms