Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Gm40662-202ENSMUST00000222263 487 ntTSL 5 BASIC4.06□□□□□ -1.76
Trafd1Q3UDK1 CT030254.3-201ENSMUST00000225959 1231 ntBASIC4.06□□□□□ -1.76
Trafd1Q3UDK1 AC074315.1-201ENSMUST00000228801 214 ntBASIC4.06□□□□□ -1.76
Trafd1Q3UDK1 Olfr453-201ENSMUST00000053647 954 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Trafd1Q3UDK1 Mir26a-2-201ENSMUST00000083496 84 ntBASIC4.06□□□□□ -1.76
Trafd1Q3UDK1 Gm24917-201ENSMUST00000083935 104 ntBASIC4.06□□□□□ -1.76
Trafd1Q3UDK1 Gm43327-201ENSMUST00000199285 4055 ntBASIC4.06□□□□□ -1.76
Trafd1Q3UDK1 Gm43705-201ENSMUST00000195958 3717 ntBASIC4.06□□□□□ -1.76
Trafd1Q3UDK1 9430025C20Rik-201ENSMUST00000068663 2115 ntBASIC4.06□□□□□ -1.76
Trafd1Q3UDK1 Gm37303-201ENSMUST00000194202 1559 ntBASIC4.06□□□□□ -1.76
Trafd1Q3UDK1 0610010F05Rik-201ENSMUST00000043356 4392 ntAPPRIS P2 TSL 5 BASIC4.05□□□□□ -1.76
Trafd1Q3UDK1 Vmn1r22-202ENSMUST00000227650 3674 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Trafd1Q3UDK1 Obox4-ps12-201ENSMUST00000180084 1362 ntBASIC4.05□□□□□ -1.76
Trafd1Q3UDK1 Gm45322-201ENSMUST00000211642 1361 ntBASIC4.05□□□□□ -1.76
Trafd1Q3UDK1 Mgat4e-202ENSMUST00000172898 1735 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
Trafd1Q3UDK1 Csn3-202ENSMUST00000113267 1258 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Trafd1Q3UDK1 BC117090-201ENSMUST00000114850 387 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Trafd1Q3UDK1 Gm11905-201ENSMUST00000117653 678 ntBASIC4.05□□□□□ -1.76
Trafd1Q3UDK1 Gm13501-201ENSMUST00000118477 979 ntBASIC4.05□□□□□ -1.76
Trafd1Q3UDK1 Gm14656-201ENSMUST00000120342 502 ntBASIC4.05□□□□□ -1.76
Trafd1Q3UDK1 Gm14229-201ENSMUST00000121178 850 ntBASIC4.05□□□□□ -1.76
Trafd1Q3UDK1 Gm22453-201ENSMUST00000122801 318 ntBASIC4.05□□□□□ -1.76
Trafd1Q3UDK1 Gm6938-201ENSMUST00000123014 771 ntTSL 3 BASIC4.05□□□□□ -1.76
Trafd1Q3UDK1 Gm15762-201ENSMUST00000126447 333 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Trafd1Q3UDK1 Gm15537-201ENSMUST00000126677 485 ntTSL 2 BASIC4.05□□□□□ -1.76
Trafd1Q3UDK1 Gm3160-201ENSMUST00000128343 607 ntBASIC4.05□□□□□ -1.76
Trafd1Q3UDK1 2810403D21Rik-207ENSMUST00000152089 852 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Trafd1Q3UDK1 Gm15279-201ENSMUST00000155593 288 ntBASIC4.05□□□□□ -1.76
Trafd1Q3UDK1 Gm17155-201ENSMUST00000165969 473 ntBASIC4.05□□□□□ -1.76
Trafd1Q3UDK1 Gm23215-201ENSMUST00000178153 121 ntBASIC4.05□□□□□ -1.76
Trafd1Q3UDK1 Gm7497-201ENSMUST00000183064 1003 ntBASIC4.05□□□□□ -1.76
Trafd1Q3UDK1 Mir6907-201ENSMUST00000183764 71 ntBASIC4.05□□□□□ -1.76
Trafd1Q3UDK1 Gm29552-201ENSMUST00000190548 660 ntBASIC4.05□□□□□ -1.76
Trafd1Q3UDK1 Gm29538-201ENSMUST00000190783 471 ntTSL 2 BASIC4.05□□□□□ -1.76
Trafd1Q3UDK1 Gm8939-201ENSMUST00000192577 964 ntBASIC4.05□□□□□ -1.76
Trafd1Q3UDK1 9530003O04Rik-201ENSMUST00000192663 908 ntBASIC4.05□□□□□ -1.76
Trafd1Q3UDK1 Gm37898-201ENSMUST00000193781 174 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Trafd1Q3UDK1 n-TSaga9-201ENSMUST00000197675 107 ntBASIC4.05□□□□□ -1.76
Trafd1Q3UDK1 Gm43295-201ENSMUST00000201439 412 ntBASIC4.05□□□□□ -1.76
Trafd1Q3UDK1 Gm35325-201ENSMUST00000208979 771 ntTSL 2 BASIC4.05□□□□□ -1.76
Trafd1Q3UDK1 Gm5338-201ENSMUST00000209530 639 ntBASIC4.05□□□□□ -1.76
Trafd1Q3UDK1 2210414F02Rik-201ENSMUST00000215316 396 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Trafd1Q3UDK1 AC133517.1-202ENSMUST00000224409 233 ntBASIC4.05□□□□□ -1.76
Trafd1Q3UDK1 AC166095.1-203ENSMUST00000224591 233 ntBASIC4.05□□□□□ -1.76
Trafd1Q3UDK1 AC156790.5-201ENSMUST00000227075 231 ntBASIC4.05□□□□□ -1.76
Trafd1Q3UDK1 AC192088.2-201ENSMUST00000227590 411 ntBASIC4.05□□□□□ -1.76
Trafd1Q3UDK1 Olfr629-201ENSMUST00000051346 1122 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Trafd1Q3UDK1 BC002059-202ENSMUST00000190415 1964 ntTSL 2 BASIC4.05□□□□□ -1.76
Trafd1Q3UDK1 Olfr799-205ENSMUST00000217364 1580 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Trafd1Q3UDK1 Olfr887-202ENSMUST00000212502 6281 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Trafd1Q3UDK1 AC142245.1-201ENSMUST00000226611 1505 ntBASIC4.05□□□□□ -1.76
Trafd1Q3UDK1 Gm44224-201ENSMUST00000204131 1463 ntBASIC4.05□□□□□ -1.76
Trafd1Q3UDK1 Vmn2r19-201ENSMUST00000073948 2565 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Trafd1Q3UDK1 Ddi1-201ENSMUST00000051706 7114 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Trafd1Q3UDK1 Olfr118-203ENSMUST00000216551 1772 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Trafd1Q3UDK1 Gm42991-201ENSMUST00000196468 3837 ntBASIC4.04□□□□□ -1.76
Trafd1Q3UDK1 Gm42927-201ENSMUST00000200624 3841 ntBASIC4.04□□□□□ -1.76
Trafd1Q3UDK1 Cd53-201ENSMUST00000038845 1742 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Trafd1Q3UDK1 Vmn2r93-201ENSMUST00000079206 2574 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Trafd1Q3UDK1 Gm24318-201ENSMUST00000104490 131 ntBASIC4.04□□□□□ -1.76
Trafd1Q3UDK1 Xlr5a-202ENSMUST00000114520 867 ntAPPRIS P1 TSL 3 BASIC4.04□□□□□ -1.76
Trafd1Q3UDK1 Clec4a3-202ENSMUST00000117173 1165 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Trafd1Q3UDK1 Gm11877-201ENSMUST00000118921 852 ntBASIC4.04□□□□□ -1.76
Trafd1Q3UDK1 Gm11965-201ENSMUST00000122017 277 ntBASIC4.04□□□□□ -1.76
Trafd1Q3UDK1 Gm25106-201ENSMUST00000122672 134 ntBASIC4.04□□□□□ -1.76
Trafd1Q3UDK1 Gm26320-201ENSMUST00000157742 306 ntBASIC4.04□□□□□ -1.76
Trafd1Q3UDK1 Gm24854-201ENSMUST00000158025 98 ntBASIC4.04□□□□□ -1.76
Trafd1Q3UDK1 Ptges3-ps-201ENSMUST00000160012 480 ntBASIC4.04□□□□□ -1.76
Trafd1Q3UDK1 Gm15508-201ENSMUST00000160330 325 ntBASIC4.04□□□□□ -1.76
Trafd1Q3UDK1 Gm17066-202ENSMUST00000165350 1113 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Trafd1Q3UDK1 Gm19807-201ENSMUST00000173971 667 ntBASIC4.04□□□□□ -1.76
Trafd1Q3UDK1 Gm22857-201ENSMUST00000174969 134 ntBASIC4.04□□□□□ -1.76
Trafd1Q3UDK1 Cox6b2-206ENSMUST00000182738 423 ntTSL 2 BASIC4.04□□□□□ -1.76
Trafd1Q3UDK1 Gm29556-201ENSMUST00000187591 696 ntBASIC4.04□□□□□ -1.76
Trafd1Q3UDK1 Gm29610-201ENSMUST00000187749 453 ntBASIC4.04□□□□□ -1.76
Trafd1Q3UDK1 Gm29327-201ENSMUST00000188229 388 ntTSL 5 BASIC4.04□□□□□ -1.76
Trafd1Q3UDK1 Gm28902-201ENSMUST00000191531 215 ntTSL 5 BASIC4.04□□□□□ -1.76
Trafd1Q3UDK1 Gm37401-201ENSMUST00000192053 347 ntTSL 5 BASIC4.04□□□□□ -1.76
Trafd1Q3UDK1 Gm45031-201ENSMUST00000206800 288 ntBASIC4.04□□□□□ -1.76
Trafd1Q3UDK1 Gm17780-201ENSMUST00000207142 612 ntBASIC4.04□□□□□ -1.76
Trafd1Q3UDK1 2500002B13Rik-202ENSMUST00000210752 298 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Trafd1Q3UDK1 Olfr369-ps1-201ENSMUST00000212589 836 ntBASIC4.04□□□□□ -1.76
Trafd1Q3UDK1 AC153899.1-201ENSMUST00000214092 1117 ntBASIC4.04□□□□□ -1.76
Trafd1Q3UDK1 Gm18016-201ENSMUST00000216119 801 ntBASIC4.04□□□□□ -1.76
Trafd1Q3UDK1 Trdn-202ENSMUST00000217779 1182 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
Trafd1Q3UDK1 AC122508.1-201ENSMUST00000218365 233 ntTSL 5 BASIC4.04□□□□□ -1.76
Trafd1Q3UDK1 Gm4057-201ENSMUST00000221407 368 ntBASIC4.04□□□□□ -1.76
Trafd1Q3UDK1 CT009754.1-201ENSMUST00000223489 558 ntTSL 3 BASIC4.04□□□□□ -1.76
Trafd1Q3UDK1 AC183096.1-201ENSMUST00000226392 130 ntBASIC4.04□□□□□ -1.76
Trafd1Q3UDK1 Vmn1r26-201ENSMUST00000049694 1020 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Trafd1Q3UDK1 Olfr1466-201ENSMUST00000075868 933 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Trafd1Q3UDK1 Rpl36a-ps1-201ENSMUST00000081987 449 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Trafd1Q3UDK1 Mir383-201ENSMUST00000083523 70 ntBASIC4.04□□□□□ -1.76
Trafd1Q3UDK1 Mir129-2-201ENSMUST00000083577 90 ntBASIC4.04□□□□□ -1.76
Trafd1Q3UDK1 Olfr774-201ENSMUST00000097164 939 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Trafd1Q3UDK1 Olfr1104-201ENSMUST00000099869 933 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Trafd1Q3UDK1 Gm6367-201ENSMUST00000178646 2464 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Trafd1Q3UDK1 1700017N19Rik-203ENSMUST00000187119 1524 ntTSL 5 BASIC4.04□□□□□ -1.76
Trafd1Q3UDK1 Gm10997-201ENSMUST00000210294 1500 ntBASIC4.04□□□□□ -1.76
Trafd1Q3UDK1 Ankar-201ENSMUST00000053499 4571 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 105.4 ms