Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm24709-201ENSMUST00000104123 132 ntBASIC6.44□□□□□ -1.38
Rfx1P48377 Scgb2b3-201ENSMUST00000108090 339 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Rfx1P48377 Gm14744-201ENSMUST00000114039 800 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Rfx1P48377 Fam122c-201ENSMUST00000114835 745 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Rfx1P48377 Hmgn2l6-201ENSMUST00000115986 267 ntBASIC6.44□□□□□ -1.38
Rfx1P48377 Mir669i-201ENSMUST00000117007 127 ntBASIC6.44□□□□□ -1.38
Rfx1P48377 Gm12386-201ENSMUST00000117380 688 ntBASIC6.44□□□□□ -1.38
Rfx1P48377 Gm15618-201ENSMUST00000121610 452 ntBASIC6.44□□□□□ -1.38
Rfx1P48377 Gm23206-201ENSMUST00000122720 184 ntBASIC6.44□□□□□ -1.38
Rfx1P48377 Gm14216-201ENSMUST00000136046 409 ntTSL 3 BASIC6.44□□□□□ -1.38
Rfx1P48377 Gm15323-201ENSMUST00000156109 429 ntTSL 3 BASIC6.44□□□□□ -1.38
Rfx1P48377 Gm23903-201ENSMUST00000157566 131 ntBASIC6.44□□□□□ -1.38
Rfx1P48377 Gm25861-201ENSMUST00000158251 109 ntBASIC6.44□□□□□ -1.38
Rfx1P48377 Gm17538-201ENSMUST00000168236 327 ntBASIC6.44□□□□□ -1.38
Rfx1P48377 Olfr296-ps1-201ENSMUST00000173904 1102 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Rfx1P48377 Mir5125-201ENSMUST00000175240 79 ntBASIC6.44□□□□□ -1.38
Rfx1P48377 Klrb1-ps1-201ENSMUST00000184388 701 ntBASIC6.44□□□□□ -1.38
Rfx1P48377 Gm28996-201ENSMUST00000190316 721 ntBASIC6.44□□□□□ -1.38
Rfx1P48377 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Rfx1P48377 Gm37573-201ENSMUST00000193993 931 ntTSL 5 BASIC6.44□□□□□ -1.38
Rfx1P48377 Trbv8-201ENSMUST00000194020 285 ntBASIC6.44□□□□□ -1.38
Rfx1P48377 Gm43175-201ENSMUST00000198450 3810 ntBASIC6.44□□□□□ -1.38
Rfx1P48377 Gbp2-ps-201ENSMUST00000198870 1269 ntBASIC6.44□□□□□ -1.38
Rfx1P48377 Gm44348-201ENSMUST00000200165 122 ntBASIC6.44□□□□□ -1.38
Rfx1P48377 Gm20426-202ENSMUST00000204789 399 ntTSL 5 BASIC6.44□□□□□ -1.38
Rfx1P48377 Gm45590-201ENSMUST00000209715 262 ntBASIC6.44□□□□□ -1.38
Rfx1P48377 Gm7607-201ENSMUST00000214920 518 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Rfx1P48377 CT010455.1-201ENSMUST00000218579 413 ntBASIC6.44□□□□□ -1.38
Rfx1P48377 AC153548.2-201ENSMUST00000219770 885 ntBASIC6.44□□□□□ -1.38
Rfx1P48377 Gm4263-201ENSMUST00000220693 1101 ntBASIC6.44□□□□□ -1.38
Rfx1P48377 AC126554.2-201ENSMUST00000223259 400 ntBASIC6.44□□□□□ -1.38
Rfx1P48377 AC156559.2-201ENSMUST00000224403 384 ntBASIC6.44□□□□□ -1.38
Rfx1P48377 AC166369.1-201ENSMUST00000228126 351 ntBASIC6.44□□□□□ -1.38
Rfx1P48377 Gm26111-201ENSMUST00000083969 106 ntBASIC6.44□□□□□ -1.38
Rfx1P48377 Zfp644-203ENSMUST00000112695 1915 ntTSL 5 BASIC6.44□□□□□ -1.38
Rfx1P48377 Gm13340-201ENSMUST00000117219 1545 ntBASIC6.44□□□□□ -1.38
Rfx1P48377 AC113059.2-201ENSMUST00000213462 3016 ntBASIC6.44□□□□□ -1.38
Rfx1P48377 Gm14886-201ENSMUST00000117208 2629 ntBASIC6.44□□□□□ -1.38
Rfx1P48377 Gm20756-202ENSMUST00000201324 1565 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Rfx1P48377 Olfr822-202ENSMUST00000216879 2663 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Rfx1P48377 Zfp62-202ENSMUST00000109197 4029 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Rfx1P48377 Rgsl1-201ENSMUST00000124558 3642 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Rfx1P48377 1700019J19Rik-202ENSMUST00000213583 1856 ntTSL 5 BASIC6.43□□□□□ -1.38
Rfx1P48377 Dst-215ENSMUST00000185269 16340 ntTSL 5 BASIC6.43□□□□□ -1.38
Rfx1P48377 Olfr178-203ENSMUST00000215032 2103 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Rfx1P48377 Olfr733-202ENSMUST00000214372 3530 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Rfx1P48377 Chd9-201ENSMUST00000048665 12008 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
Rfx1P48377 Traj17-201ENSMUST00000103724 63 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Rfx1P48377 Gm24886-201ENSMUST00000104384 123 ntBASIC6.43□□□□□ -1.38
Rfx1P48377 Zfp931-202ENSMUST00000108924 962 ntAPPRIS P1 TSL 3 BASIC6.43□□□□□ -1.38
Rfx1P48377 Gm14706-201ENSMUST00000117744 255 ntBASIC6.43□□□□□ -1.38
Rfx1P48377 Gm14307-201ENSMUST00000118930 291 ntBASIC6.43□□□□□ -1.38
Rfx1P48377 Gm12244-201ENSMUST00000119500 291 ntBASIC6.43□□□□□ -1.38
Rfx1P48377 Gm15781-201ENSMUST00000120216 323 ntBASIC6.43□□□□□ -1.38
Rfx1P48377 Gm15480-201ENSMUST00000120442 519 ntBASIC6.43□□□□□ -1.38
Rfx1P48377 Gm13214-201ENSMUST00000122137 408 ntBASIC6.43□□□□□ -1.38
Rfx1P48377 Gm16189-201ENSMUST00000123707 997 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Rfx1P48377 Gm14297-201ENSMUST00000129110 291 ntBASIC6.43□□□□□ -1.38
Rfx1P48377 Gm26350-201ENSMUST00000157531 288 ntBASIC6.43□□□□□ -1.38
Rfx1P48377 Gm22518-201ENSMUST00000158267 68 ntBASIC6.43□□□□□ -1.38
Rfx1P48377 Gm17153-201ENSMUST00000171314 490 ntBASIC6.43□□□□□ -1.38
Rfx1P48377 Gm17907-201ENSMUST00000173150 710 ntBASIC6.43□□□□□ -1.38
Rfx1P48377 Gm25037-201ENSMUST00000175418 110 ntBASIC6.43□□□□□ -1.38
Rfx1P48377 Gm22420-201ENSMUST00000178795 126 ntBASIC6.43□□□□□ -1.38
Rfx1P48377 Gm9320-201ENSMUST00000184151 473 ntBASIC6.43□□□□□ -1.38
Rfx1P48377 Gm38046-201ENSMUST00000192733 550 ntBASIC6.43□□□□□ -1.38
Rfx1P48377 Gm43617-201ENSMUST00000196418 606 ntTSL 2 BASIC6.43□□□□□ -1.38
Rfx1P48377 Gm42880-201ENSMUST00000198028 459 ntTSL 3 BASIC6.43□□□□□ -1.38
Rfx1P48377 Gm2602-201ENSMUST00000202112 571 ntBASIC6.43□□□□□ -1.38
Rfx1P48377 Gm18482-201ENSMUST00000202405 760 ntBASIC6.43□□□□□ -1.38
Rfx1P48377 Gm19131-201ENSMUST00000203408 789 ntBASIC6.43□□□□□ -1.38
Rfx1P48377 AL929417.1-201ENSMUST00000214901 124 ntBASIC6.43□□□□□ -1.38
Rfx1P48377 Gm5917-201ENSMUST00000217638 721 ntBASIC6.43□□□□□ -1.38
Rfx1P48377 AC099578.1-201ENSMUST00000220147 435 ntBASIC6.43□□□□□ -1.38
Rfx1P48377 Gm2645-201ENSMUST00000223516 547 ntBASIC6.43□□□□□ -1.38
Rfx1P48377 Gm5830-201ENSMUST00000049117 443 ntBASIC6.43□□□□□ -1.38
Rfx1P48377 Ear14-201ENSMUST00000049559 468 ntBASIC6.43□□□□□ -1.38
Rfx1P48377 Olfr690-201ENSMUST00000061920 1062 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Rfx1P48377 Snord59a-201ENSMUST00000082844 74 ntBASIC6.43□□□□□ -1.38
Rfx1P48377 Tas2r115-201ENSMUST00000095394 1033 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Rfx1P48377 Olfr1156-201ENSMUST00000099842 1076 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Rfx1P48377 Olfr1016-201ENSMUST00000099915 930 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Rfx1P48377 Glb1l3-201ENSMUST00000034448 2468 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
Rfx1P48377 Zfp874b-201ENSMUST00000019572 3744 ntAPPRIS P1 TSL 3 BASIC6.43□□□□□ -1.38
Rfx1P48377 Vmn1r218-203ENSMUST00000227050 10364 ntAPPRIS P2 BASIC6.43□□□□□ -1.38
Rfx1P48377 Adam7-201ENSMUST00000022640 3469 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Rfx1P48377 Otc-202ENSMUST00000115528 2997 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Rfx1P48377 Olfr1303-202ENSMUST00000216114 2976 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Rfx1P48377 Clec4a2-202ENSMUST00000041779 2481 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
Rfx1P48377 Gm19035-201ENSMUST00000193299 1742 ntBASIC6.42□□□□□ -1.38
Rfx1P48377 Olfr812-203ENSMUST00000205013 1718 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Rfx1P48377 Olfr133-203ENSMUST00000215078 3130 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Rfx1P48377 Olfr736-203ENSMUST00000213755 2338 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Rfx1P48377 Gm20486-201ENSMUST00000101544 128 ntBASIC6.42□□□□□ -1.38
Rfx1P48377 n-R5s16-201ENSMUST00000104555 119 ntBASIC6.42□□□□□ -1.38
Rfx1P48377 Gm13090-201ENSMUST00000105667 746 ntAPPRIS P1 TSL 3 BASIC6.42□□□□□ -1.38
Rfx1P48377 Arhgdib-202ENSMUST00000111891 828 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
Rfx1P48377 Gm14529-201ENSMUST00000117894 406 ntBASIC6.42□□□□□ -1.38
Rfx1P48377 Gm11623-201ENSMUST00000120176 1225 ntBASIC6.42□□□□□ -1.38
Rfx1P48377 Gm12413-201ENSMUST00000121508 312 ntBASIC6.42□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 150.6 ms