Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm14661-201ENSMUST00000152669 2051 ntTSL 5 BASIC3.9□□□□□ -1.78
HttP42859 Gm37033-201ENSMUST00000193199 7350 ntBASIC3.9□□□□□ -1.79
HttP42859 St8sia4-204ENSMUST00000189556 10027 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
HttP42859 1700010H22Rik-202ENSMUST00000187592 1003 ntTSL 5 BASIC3.9□□□□□ -1.79
HttP42859 Gm19987-201ENSMUST00000216339 499 ntBASIC3.9□□□□□ -1.79
HttP42859 Sult6b1-201ENSMUST00000042683 839 ntTSL 5 BASIC3.9□□□□□ -1.79
HttP42859 Gm25205-201ENSMUST00000082841 103 ntBASIC3.9□□□□□ -1.79
HttP42859 Zfp708-201ENSMUST00000109742 2416 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.79
HttP42859 Abi3bp-204ENSMUST00000171000 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
HttP42859 Olfr898-202ENSMUST00000216304 3979 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
HttP42859 Larp4-201ENSMUST00000057632 6527 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
HttP42859 Arhgap32-201ENSMUST00000168954 8703 ntTSL 5 BASIC3.9□□□□□ -1.79
HttP42859 Gm43300-201ENSMUST00000198540 2043 ntBASIC3.9□□□□□ -1.79
HttP42859 Hsfy2-201ENSMUST00000062085 1392 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
HttP42859 Rps24-201ENSMUST00000112384 468 ntAPPRIS ALT1 TSL 5 BASIC3.9□□□□□ -1.79
HttP42859 Klrc2-203ENSMUST00000118401 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
HttP42859 Gm15387-201ENSMUST00000120421 648 ntBASIC3.9□□□□□ -1.79
HttP42859 n-R5s30-201ENSMUST00000122624 122 ntBASIC3.9□□□□□ -1.79
HttP42859 Hmgb1-ps7-201ENSMUST00000173370 648 ntBASIC3.9□□□□□ -1.79
HttP42859 Gm26556-201ENSMUST00000180645 320 ntBASIC3.9□□□□□ -1.79
HttP42859 Gm38560-201ENSMUST00000220169 646 ntTSL 3 BASIC3.9□□□□□ -1.79
HttP42859 Ms4a2-201ENSMUST00000025583 1211 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
HttP42859 Gm5518-201ENSMUST00000084171 648 ntBASIC3.9□□□□□ -1.79
HttP42859 Abca5-201ENSMUST00000043961 8231 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
HttP42859 Vmn1r180-201ENSMUST00000173816 5060 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
HttP42859 Olfr612-202ENSMUST00000214269 2420 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
HttP42859 Ncl-201ENSMUST00000027438 8202 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HttP42859 Olfr1196-202ENSMUST00000216928 4270 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
HttP42859 Fbxo48-202ENSMUST00000109635 1098 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HttP42859 Gm14926-201ENSMUST00000120650 508 ntBASIC3.89□□□□□ -1.79
HttP42859 Gm44399-201ENSMUST00000205043 226 ntBASIC3.89□□□□□ -1.79
HttP42859 Gm14886-201ENSMUST00000117208 2629 ntBASIC3.89□□□□□ -1.79
HttP42859 Vmn1r203-203ENSMUST00000228889 8213 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
HttP42859 Zfp759-201ENSMUST00000052716 3482 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HttP42859 Abca15-202ENSMUST00000121265 5335 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
HttP42859 Abca15-201ENSMUST00000076272 5335 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
HttP42859 Gm2026-201ENSMUST00000109007 1621 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
HttP42859 Cbll1-204ENSMUST00000185739 3945 ntAPPRIS ALT1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HttP42859 Vmn1r-ps126-201ENSMUST00000117681 926 ntBASIC3.89□□□□□ -1.79
HttP42859 Gm16068-201ENSMUST00000136557 504 ntTSL 3 BASIC3.89□□□□□ -1.79
HttP42859 4930412F09Rik-201ENSMUST00000139006 1017 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
HttP42859 Gm24550-201ENSMUST00000158648 279 ntBASIC3.89□□□□□ -1.79
HttP42859 Mir3471-2-201ENSMUST00000174896 102 ntBASIC3.89□□□□□ -1.79
HttP42859 Gm29334-201ENSMUST00000190334 357 ntBASIC3.89□□□□□ -1.79
HttP42859 n-TSaga9-201ENSMUST00000197675 107 ntBASIC3.89□□□□□ -1.79
HttP42859 AC161254.1-201ENSMUST00000220310 3842 ntBASIC3.89□□□□□ -1.79
HttP42859 Gm6171-201ENSMUST00000220760 645 ntBASIC3.89□□□□□ -1.79
HttP42859 Gm4064-201ENSMUST00000187482 1561 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HttP42859 Pum2-216ENSMUST00000178015 5874 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
HttP42859 Nlrp4b-201ENSMUST00000047809 3274 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HttP42859 Havcr2-201ENSMUST00000020668 2721 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HttP42859 Smarca2-220ENSMUST00000207054 2333 ntTSL 5 BASIC3.89□□□□□ -1.79
HttP42859 Gm37745-201ENSMUST00000193304 8163 ntBASIC3.89□□□□□ -1.79
HttP42859 Cxcl15-201ENSMUST00000031322 2127 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
HttP42859 Kif20b-203ENSMUST00000223907 5423 ntAPPRIS ALT2 BASIC3.88□□□□□ -1.79
HttP42859 Smim9-201ENSMUST00000101433 706 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
HttP42859 Hspb11-202ENSMUST00000106749 607 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
HttP42859 4933400A11Rik-203ENSMUST00000112102 1101 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
HttP42859 2010106E10Rik-202ENSMUST00000113412 1276 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
HttP42859 Gm15875-201ENSMUST00000152264 273 ntTSL 3 BASIC3.88□□□□□ -1.79
HttP42859 Gm8641-201ENSMUST00000186995 826 ntBASIC3.88□□□□□ -1.79
HttP42859 Gm44092-201ENSMUST00000204470 258 ntBASIC3.88□□□□□ -1.79
HttP42859 Olfr97-204ENSMUST00000214622 1573 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
HttP42859 Rps15a-ps1-201ENSMUST00000071120 393 ntBASIC3.88□□□□□ -1.79
HttP42859 Dnah2-201ENSMUST00000035539 13569 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
HttP42859 Serpini1-201ENSMUST00000029423 4091 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
HttP42859 Sorbs2-231ENSMUST00000171337 5651 ntAPPRIS P4 TSL 1 (best) BASIC3.88□□□□□ -1.79
HttP42859 Sspo-206ENSMUST00000212740 15408 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
HttP42859 Cbll1-201ENSMUST00000064240 3937 ntAPPRIS ALT1 TSL 5 BASIC3.88□□□□□ -1.79
HttP42859 Txndc9-204ENSMUST00000193832 3472 ntTSL 2 BASIC3.88□□□□□ -1.79
HttP42859 Rapgef4-201ENSMUST00000028525 4109 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
HttP42859 Zfp260-202ENSMUST00000108200 3604 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
HttP42859 4930444F02Rik-201ENSMUST00000215429 6871 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
HttP42859 Gm11913-201ENSMUST00000119094 336 ntBASIC3.88□□□□□ -1.79
HttP42859 Hspe1-ps6-201ENSMUST00000120275 283 ntBASIC3.88□□□□□ -1.79
HttP42859 Gm13787-201ENSMUST00000120422 168 ntBASIC3.88□□□□□ -1.79
HttP42859 Hba-ps4-201ENSMUST00000128900 447 ntBASIC3.88□□□□□ -1.79
HttP42859 Gm15323-201ENSMUST00000156109 429 ntTSL 3 BASIC3.88□□□□□ -1.79
HttP42859 Gm24681-201ENSMUST00000158760 107 ntBASIC3.88□□□□□ -1.79
HttP42859 Olfr1501-203ENSMUST00000215350 4395 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
HttP42859 Gm13912-201ENSMUST00000156541 1860 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
HttP42859 Zfy2-202ENSMUST00000187148 2846 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
HttP42859 Dnah1-201ENSMUST00000048603 12872 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
HttP42859 Nsd2-205ENSMUST00000114399 7786 ntTSL 5 BASIC3.88□□□□□ -1.79
HttP42859 Scaper-201ENSMUST00000037408 5158 ntAPPRIS P2 TSL 5 BASIC3.88□□□□□ -1.79
HttP42859 Trav8d-2-201ENSMUST00000103605 334 ntAPPRIS ALT2 BASIC3.88□□□□□ -1.79
HttP42859 Gm26027-201ENSMUST00000122725 268 ntBASIC3.88□□□□□ -1.79
HttP42859 4930405D11Rik-201ENSMUST00000132218 568 ntTSL 3 BASIC3.88□□□□□ -1.79
HttP42859 Mir3075-201ENSMUST00000175340 85 ntBASIC3.88□□□□□ -1.79
HttP42859 Gm29259-201ENSMUST00000186396 694 ntBASIC3.88□□□□□ -1.79
HttP42859 1700041M19Rik-202ENSMUST00000190908 1123 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
HttP42859 Gm7652-201ENSMUST00000200440 1151 ntBASIC3.88□□□□□ -1.79
HttP42859 Scoc-204ENSMUST00000212449 280 ntTSL 3 BASIC3.88□□□□□ -1.79
HttP42859 AC159629.1-201ENSMUST00000220698 568 ntTSL 2 BASIC3.88□□□□□ -1.79
HttP42859 AC132344.1-201ENSMUST00000221289 376 ntTSL 3 BASIC3.88□□□□□ -1.79
HttP42859 Itpr1-205ENSMUST00000203615 9761 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
HttP42859 Heatr1-201ENSMUST00000059270 6780 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
HttP42859 Pik3ca-202ENSMUST00000108242 6171 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
HttP42859 Dennd4c-204ENSMUST00000142837 5870 ntAPPRIS P2 TSL 1 (best) BASIC3.87□□□□□ -1.79
HttP42859 Gm37747-201ENSMUST00000193717 4003 ntBASIC3.87□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 77.6 ms