Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Gm20342-201ENSMUST00000185480 9720 ntBASIC4.11□□□□□ -1.75
Cxcl12P40224 Zfp967-202ENSMUST00000178443 1458 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
Cxcl12P40224 Zfp969-203ENSMUST00000179061 1458 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
Cxcl12P40224 5830444F18Rik-201ENSMUST00000194009 1992 ntBASIC4.11□□□□□ -1.75
Cxcl12P40224 Gm38101-201ENSMUST00000193484 3557 ntBASIC4.1□□□□□ -1.75
Cxcl12P40224 Gm15304-201ENSMUST00000122150 2640 ntBASIC4.1□□□□□ -1.75
Cxcl12P40224 Dst-202ENSMUST00000097786 17212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
Cxcl12P40224 Olfr963-202ENSMUST00000215649 2203 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Cxcl12P40224 Nbeal1-203ENSMUST00000160834 15731 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Cxcl12P40224 Trav16d-dv11-201ENSMUST00000103606 353 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Cxcl12P40224 Gm13321-201ENSMUST00000117101 400 ntBASIC4.1□□□□□ -1.75
Cxcl12P40224 Gm14973-201ENSMUST00000117248 255 ntBASIC4.1□□□□□ -1.75
Cxcl12P40224 Gm13386-201ENSMUST00000117677 124 ntBASIC4.1□□□□□ -1.75
Cxcl12P40224 Gm11566-201ENSMUST00000118550 203 ntBASIC4.1□□□□□ -1.75
Cxcl12P40224 Gm11704-201ENSMUST00000120031 214 ntBASIC4.1□□□□□ -1.75
Cxcl12P40224 Gm12412-201ENSMUST00000121867 328 ntBASIC4.1□□□□□ -1.75
Cxcl12P40224 Gm25290-201ENSMUST00000122796 144 ntBASIC4.1□□□□□ -1.75
Cxcl12P40224 4930519F16Rik-202ENSMUST00000127012 685 ntTSL 3 BASIC4.1□□□□□ -1.75
Cxcl12P40224 Gm26320-201ENSMUST00000157742 306 ntBASIC4.1□□□□□ -1.75
Cxcl12P40224 Gm22116-201ENSMUST00000158791 141 ntBASIC4.1□□□□□ -1.75
Cxcl12P40224 Olfr325-201ENSMUST00000169428 1065 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Cxcl12P40224 Gm28591-201ENSMUST00000185259 183 ntBASIC4.1□□□□□ -1.75
Cxcl12P40224 Gm43475-201ENSMUST00000196673 400 ntTSL 2 BASIC4.1□□□□□ -1.75
Cxcl12P40224 Gm42470-201ENSMUST00000198086 251 ntTSL 3 BASIC4.1□□□□□ -1.75
Cxcl12P40224 Gm44523-201ENSMUST00000205616 417 ntBASIC4.1□□□□□ -1.75
Cxcl12P40224 AC153979.1-201ENSMUST00000219684 242 ntTSL 5 BASIC4.1□□□□□ -1.75
Cxcl12P40224 Gm40394-201ENSMUST00000221321 633 ntTSL 5 BASIC4.1□□□□□ -1.75
Cxcl12P40224 Olfr812-201ENSMUST00000057775 1043 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Cxcl12P40224 Gm10237-201ENSMUST00000078393 273 ntBASIC4.1□□□□□ -1.75
Cxcl12P40224 Olfr192-201ENSMUST00000080251 925 ntBASIC4.1□□□□□ -1.75
Cxcl12P40224 Gm14781-201ENSMUST00000078469 1360 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Cxcl12P40224 Mageb5-201ENSMUST00000082048 1357 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Cxcl12P40224 Olfr1472-202ENSMUST00000096201 1377 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Cxcl12P40224 Nlrp4f-204ENSMUST00000221659 3551 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Cxcl12P40224 Olfr266-202ENSMUST00000213616 2195 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Cxcl12P40224 Vmn1r184-202ENSMUST00000227230 7999 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Cxcl12P40224 Olfr629-203ENSMUST00000216300 2277 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Cxcl12P40224 Gm42671-201ENSMUST00000198013 1604 ntBASIC4.1□□□□□ -1.75
Cxcl12P40224 Gm45131-201ENSMUST00000208051 2582 ntBASIC4.09□□□□□ -1.75
Cxcl12P40224 Olfr1043-203ENSMUST00000213949 1778 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Cxcl12P40224 9430018G01Rik-201ENSMUST00000203260 3758 ntTSL 5 BASIC4.09□□□□□ -1.75
Cxcl12P40224 Vmn1r30-204ENSMUST00000228577 1968 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Cxcl12P40224 Elavl4-204ENSMUST00000106598 3997 ntAPPRIS ALT1 TSL 5 BASIC4.09□□□□□ -1.75
Cxcl12P40224 Gm37311-201ENSMUST00000195541 2024 ntBASIC4.09□□□□□ -1.75
Cxcl12P40224 Vmn1r51-205ENSMUST00000227109 4214 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Cxcl12P40224 Olfr843-202ENSMUST00000214019 7499 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Cxcl12P40224 Zc4h2-203ENSMUST00000120620 2156 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Cxcl12P40224 Vmn1r39-203ENSMUST00000227285 2245 ntAPPRIS ALT2 BASIC4.09□□□□□ -1.75
Cxcl12P40224 Sult2a4-201ENSMUST00000108520 984 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
Cxcl12P40224 Bsph2-201ENSMUST00000108526 532 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Cxcl12P40224 Grip1os2-201ENSMUST00000153898 722 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Cxcl12P40224 Gm14637-201ENSMUST00000156516 444 ntTSL 2 BASIC4.09□□□□□ -1.75
Cxcl12P40224 Gm16026-202ENSMUST00000159695 772 ntBASIC4.09□□□□□ -1.75
Cxcl12P40224 Gm3470-201ENSMUST00000160819 420 ntBASIC4.09□□□□□ -1.75
Cxcl12P40224 Gm2862-201ENSMUST00000161524 328 ntBASIC4.09□□□□□ -1.75
Cxcl12P40224 Vmn2r-ps10-201ENSMUST00000176836 898 ntBASIC4.09□□□□□ -1.75
Cxcl12P40224 Vmn2r-ps8-201ENSMUST00000177088 898 ntBASIC4.09□□□□□ -1.75
Cxcl12P40224 Vmn1r227-202ENSMUST00000179914 1026 ntBASIC4.09□□□□□ -1.75
Cxcl12P40224 Gm3434-202ENSMUST00000184421 521 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Cxcl12P40224 Gm29065-201ENSMUST00000188786 487 ntTSL 3 BASIC4.09□□□□□ -1.75
Cxcl12P40224 Gm37741-201ENSMUST00000191768 1256 ntBASIC4.09□□□□□ -1.75
Cxcl12P40224 Gm8197-201ENSMUST00000192906 363 ntTSL 5 BASIC4.09□□□□□ -1.75
Cxcl12P40224 1700023G09Rik-202ENSMUST00000194671 308 ntTSL 3 BASIC4.09□□□□□ -1.75
Cxcl12P40224 Gm37473-201ENSMUST00000195079 674 ntTSL 5 BASIC4.09□□□□□ -1.75
Cxcl12P40224 Gm37676-201ENSMUST00000195496 507 ntBASIC4.09□□□□□ -1.75
Cxcl12P40224 Traj57-202ENSMUST00000196977 63 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Cxcl12P40224 Gm17887-201ENSMUST00000200194 547 ntBASIC4.09□□□□□ -1.75
Cxcl12P40224 Gm19596-201ENSMUST00000203685 739 ntBASIC4.09□□□□□ -1.75
Cxcl12P40224 Gm44623-201ENSMUST00000207934 434 ntBASIC4.09□□□□□ -1.75
Cxcl12P40224 Gm44543-201ENSMUST00000209136 396 ntBASIC4.09□□□□□ -1.75
Cxcl12P40224 Olfr529-ps1-201ENSMUST00000211097 928 ntBASIC4.09□□□□□ -1.75
Cxcl12P40224 AC153370.1-201ENSMUST00000220296 635 ntTSL 5 BASIC4.09□□□□□ -1.75
Cxcl12P40224 AC159629.1-201ENSMUST00000220698 568 ntTSL 2 BASIC4.09□□□□□ -1.75
Cxcl12P40224 Gm21007-201ENSMUST00000221024 326 ntBASIC4.09□□□□□ -1.75
Cxcl12P40224 AC159252.1-201ENSMUST00000224450 553 ntBASIC4.09□□□□□ -1.75
Cxcl12P40224 AC154838.2-201ENSMUST00000226602 747 ntBASIC4.09□□□□□ -1.75
Cxcl12P40224 Olfr1151-201ENSMUST00000061081 927 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Cxcl12P40224 Mir128-1-201ENSMUST00000083586 70 ntBASIC4.09□□□□□ -1.75
Cxcl12P40224 Gm44532-201ENSMUST00000207723 2598 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Cxcl12P40224 Fat3-205ENSMUST00000217308 18760 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Cxcl12P40224 Acsm3-204ENSMUST00000106528 2755 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Cxcl12P40224 5830405F06Rik-201ENSMUST00000192753 1755 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
Cxcl12P40224 Gm43845-201ENSMUST00000202462 1820 ntBASIC4.09□□□□□ -1.76
Cxcl12P40224 Clec5a-202ENSMUST00000101491 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.76
Cxcl12P40224 Kcnt2-202ENSMUST00000120709 5790 ntTSL 5 BASIC4.09□□□□□ -1.76
Cxcl12P40224 Vmn1r214-202ENSMUST00000227236 3892 ntAPPRIS P1 BASIC4.09□□□□□ -1.76
Cxcl12P40224 Gm15097-202ENSMUST00000112741 1953 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.76
Cxcl12P40224 Gm14696-201ENSMUST00000144294 3976 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
Cxcl12P40224 Zfp119b-202ENSMUST00000189452 2078 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
Cxcl12P40224 AC167420.1-201ENSMUST00000222999 2121 ntBASIC4.09□□□□□ -1.76
Cxcl12P40224 Ccser2-201ENSMUST00000067700 7334 ntTSL 5 BASIC4.09□□□□□ -1.76
Cxcl12P40224 Cep295-208ENSMUST00000161132 7605 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.76
Cxcl12P40224 Gm26696-201ENSMUST00000181941 2848 ntBASIC4.08□□□□□ -1.76
Cxcl12P40224 Cdc27-203ENSMUST00000106962 3160 ntTSL 5 BASIC4.08□□□□□ -1.76
Cxcl12P40224 Fzd3-202ENSMUST00000131309 12734 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Cxcl12P40224 Gm37696-201ENSMUST00000194223 3349 ntBASIC4.08□□□□□ -1.76
Cxcl12P40224 Vmn2r7-202ENSMUST00000161972 3583 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
Cxcl12P40224 Mir680-3-201ENSMUST00000102298 87 ntBASIC4.08□□□□□ -1.76
Cxcl12P40224 Trdv5-201ENSMUST00000103685 438 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Cxcl12P40224 Gm6710-202ENSMUST00000109012 1665 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms