Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm22613-201ENSMUST00000122679 292 ntBASIC5.03□□□□□ -1.6
Traf1P39428 Gm23781-201ENSMUST00000157940 308 ntBASIC5.03□□□□□ -1.6
Traf1P39428 Adgrg4-206ENSMUST00000168724 531 ntBASIC5.03□□□□□ -1.6
Traf1P39428 Vmn2r-ps74-201ENSMUST00000174705 917 ntBASIC5.03□□□□□ -1.6
Traf1P39428 Scgb2a2-201ENSMUST00000179814 1107 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Traf1P39428 Mir6975-201ENSMUST00000184879 61 ntBASIC5.03□□□□□ -1.6
Traf1P39428 Gm3496-201ENSMUST00000188283 745 ntBASIC5.03□□□□□ -1.6
Traf1P39428 Gm37601-201ENSMUST00000194922 394 ntBASIC5.03□□□□□ -1.6
Traf1P39428 Gm44002-201ENSMUST00000205134 594 ntBASIC5.03□□□□□ -1.6
Traf1P39428 4930470O06Rik-201ENSMUST00000209438 662 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Traf1P39428 Olfr879-ps1-201ENSMUST00000212455 694 ntBASIC5.03□□□□□ -1.6
Traf1P39428 Olfr964-ps1-201ENSMUST00000217577 914 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Traf1P39428 AC139638.1-201ENSMUST00000218027 364 ntBASIC5.03□□□□□ -1.6
Traf1P39428 Gm40477-202ENSMUST00000221505 881 ntTSL 3 BASIC5.03□□□□□ -1.6
Traf1P39428 AC129308.2-201ENSMUST00000224588 789 ntBASIC5.03□□□□□ -1.6
Traf1P39428 Reg3g-201ENSMUST00000032089 771 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Traf1P39428 Olfr1176-201ENSMUST00000057439 949 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Traf1P39428 Olfr622-201ENSMUST00000058744 1105 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Traf1P39428 Wfdc17-201ENSMUST00000092836 533 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Traf1P39428 Skint3-201ENSMUST00000038455 3627 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
Traf1P39428 Olfr1251-202ENSMUST00000214639 3071 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Traf1P39428 Olfr646-202ENSMUST00000214099 3778 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Traf1P39428 Hfm1-201ENSMUST00000112690 5018 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Traf1P39428 AC152981.1-201ENSMUST00000218320 2480 ntBASIC5.03□□□□□ -1.6
Traf1P39428 Gm15226-201ENSMUST00000156526 2971 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Traf1P39428 Olfr1123-203ENSMUST00000216208 5245 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
Traf1P39428 Olfr1251-201ENSMUST00000214304 3133 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Traf1P39428 Gm38212-201ENSMUST00000194081 2756 ntBASIC5.03□□□□□ -1.6
Traf1P39428 Olfr148-202ENSMUST00000216801 2775 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Traf1P39428 9430018G01Rik-201ENSMUST00000203260 3758 ntTSL 5 BASIC5.03□□□□□ -1.6
Traf1P39428 Gm42876-201ENSMUST00000196989 3215 ntBASIC5.02□□□□□ -1.61
Traf1P39428 Olfr887-202ENSMUST00000212502 6281 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Traf1P39428 5930409G06Rik-201ENSMUST00000192347 1544 ntBASIC5.02□□□□□ -1.61
Traf1P39428 AC122357.2-201ENSMUST00000220732 1525 ntBASIC5.02□□□□□ -1.61
Traf1P39428 Olfr575-202ENSMUST00000213477 3512 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Traf1P39428 Mmrn1-201ENSMUST00000129603 4477 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
Traf1P39428 B130011K05Rik-201ENSMUST00000151765 3270 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Traf1P39428 Vmn2r93-201ENSMUST00000079206 2574 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Traf1P39428 Igkv1-135-201ENSMUST00000103303 394 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Traf1P39428 Gm23273-201ENSMUST00000104058 135 ntBASIC5.02□□□□□ -1.61
Traf1P39428 Gm10964-201ENSMUST00000106852 120 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Traf1P39428 Gm13501-201ENSMUST00000118477 979 ntBASIC5.02□□□□□ -1.61
Traf1P39428 Gm14908-201ENSMUST00000120930 1286 ntBASIC5.02□□□□□ -1.61
Traf1P39428 Gm7350-201ENSMUST00000120964 636 ntBASIC5.02□□□□□ -1.61
Traf1P39428 Chrna1os-201ENSMUST00000125413 680 ntTSL 3 BASIC5.02□□□□□ -1.61
Traf1P39428 Gm16545-201ENSMUST00000161968 463 ntBASIC5.02□□□□□ -1.61
Traf1P39428 Gm22111-201ENSMUST00000178010 79 ntBASIC5.02□□□□□ -1.61
Traf1P39428 Gm23687-201ENSMUST00000178664 79 ntBASIC5.02□□□□□ -1.61
Traf1P39428 Gm21816-201ENSMUST00000179255 360 ntBASIC5.02□□□□□ -1.61
Traf1P39428 Gm24566-201ENSMUST00000179286 79 ntBASIC5.02□□□□□ -1.61
Traf1P39428 Gm23305-201ENSMUST00000179342 79 ntBASIC5.02□□□□□ -1.61
Traf1P39428 Gm26389-201ENSMUST00000179819 79 ntBASIC5.02□□□□□ -1.61
Traf1P39428 Gm22130-201ENSMUST00000179979 79 ntBASIC5.02□□□□□ -1.61
Traf1P39428 Gm22393-201ENSMUST00000180153 79 ntBASIC5.02□□□□□ -1.61
Traf1P39428 Gm25085-201ENSMUST00000180298 79 ntBASIC5.02□□□□□ -1.61
Traf1P39428 Gm27457-201ENSMUST00000184771 156 ntBASIC5.02□□□□□ -1.61
Traf1P39428 Gm7135-201ENSMUST00000187538 675 ntTSL 3 BASIC5.02□□□□□ -1.61
Traf1P39428 1700023F02Rik-203ENSMUST00000189619 473 ntTSL 3 BASIC5.02□□□□□ -1.61
Traf1P39428 Gm34068-201ENSMUST00000193310 632 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Traf1P39428 Gm37505-201ENSMUST00000195670 461 ntTSL 5 BASIC5.02□□□□□ -1.61
Traf1P39428 Gm17954-201ENSMUST00000195893 607 ntBASIC5.02□□□□□ -1.61
Traf1P39428 Gm42564-201ENSMUST00000196013 582 ntTSL 5 BASIC5.02□□□□□ -1.61
Traf1P39428 Olfr892-ps1-201ENSMUST00000211998 932 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Traf1P39428 AC118733.1-201ENSMUST00000217387 1217 ntBASIC5.02□□□□□ -1.61
Traf1P39428 BC023105-201ENSMUST00000073997 1227 ntBASIC5.02□□□□□ -1.61
Traf1P39428 Gm10491-201ENSMUST00000085330 117 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Traf1P39428 Gm10780-201ENSMUST00000099459 285 ntBASIC5.02□□□□□ -1.61
Traf1P39428 Kif20b-201ENSMUST00000087341 5564 ntAPPRIS P2 TSL 5 BASIC5.02□□□□□ -1.61
Traf1P39428 Usp15-211ENSMUST00000220377 11525 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Traf1P39428 Klhl13-201ENSMUST00000035973 2996 ntTSL 5 BASIC5.02□□□□□ -1.61
Traf1P39428 Gm35191-201ENSMUST00000200925 2475 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Traf1P39428 Kctd12b-202ENSMUST00000112572 4851 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Traf1P39428 C2cd6-201ENSMUST00000097080 2131 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
Traf1P39428 Olfr32-205ENSMUST00000215659 2998 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
Traf1P39428 Olfr118-203ENSMUST00000216551 1772 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Traf1P39428 Macc1-201ENSMUST00000048880 3818 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Traf1P39428 Synpr-207ENSMUST00000223583 3362 ntBASIC5.01□□□□□ -1.61
Traf1P39428 Vmn1r171-204ENSMUST00000226733 2918 ntAPPRIS ALT2 BASIC5.01□□□□□ -1.61
Traf1P39428 Gm44288-201ENSMUST00000205061 2795 ntBASIC5.01□□□□□ -1.61
Traf1P39428 AC126673.1-201ENSMUST00000223208 3856 ntBASIC5.01□□□□□ -1.61
Traf1P39428 Ank2-208ENSMUST00000182078 14305 ntAPPRIS P2 TSL 5 BASIC5.01□□□□□ -1.61
Traf1P39428 Gm45137-201ENSMUST00000208652 4415 ntBASIC5.01□□□□□ -1.61
Traf1P39428 Trav15-1-dv6-1-201ENSMUST00000103653 349 ntAPPRIS ALT2 BASIC5.01□□□□□ -1.61
Traf1P39428 Snora64-201ENSMUST00000104521 134 ntBASIC5.01□□□□□ -1.61
Traf1P39428 Gm13687-201ENSMUST00000119857 282 ntBASIC5.01□□□□□ -1.61
Traf1P39428 Gm14927-201ENSMUST00000120283 454 ntBASIC5.01□□□□□ -1.61
Traf1P39428 Gm13080-201ENSMUST00000120556 420 ntBASIC5.01□□□□□ -1.61
Traf1P39428 Gm15350-201ENSMUST00000135138 569 ntTSL 2 BASIC5.01□□□□□ -1.61
Traf1P39428 Gm16300-201ENSMUST00000160031 1279 ntBASIC5.01□□□□□ -1.61
Traf1P39428 Gm5916-201ENSMUST00000168452 1142 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Traf1P39428 Mir5134-201ENSMUST00000175529 78 ntBASIC5.01□□□□□ -1.61
Traf1P39428 Gm11394-201ENSMUST00000181421 517 ntBASIC5.01□□□□□ -1.61
Traf1P39428 AV026068-206ENSMUST00000187461 513 ntTSL 2 BASIC5.01□□□□□ -1.61
Traf1P39428 Gm17777-201ENSMUST00000189740 1276 ntBASIC5.01□□□□□ -1.61
Traf1P39428 Gm29341-201ENSMUST00000190179 370 ntTSL 5 BASIC5.01□□□□□ -1.61
Traf1P39428 Gm29097-201ENSMUST00000190273 422 ntBASIC5.01□□□□□ -1.61
Traf1P39428 Gm30280-201ENSMUST00000192214 262 ntBASIC5.01□□□□□ -1.61
Traf1P39428 Gm37134-201ENSMUST00000195810 628 ntTSL 3 BASIC5.01□□□□□ -1.61
Traf1P39428 Gm43569-201ENSMUST00000196200 559 ntTSL 3 BASIC5.01□□□□□ -1.61
Traf1P39428 Cycs-ps2-201ENSMUST00000197114 292 ntBASIC5.01□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 11.3 ms